GenomeNet

Database: Pfam
Entry: IceA2
LinkDB: IceA2
Original site: IceA2 
#=GF ID   IceA2
#=GF AC   PF05862.15
#=GF DE   Helicobacter pylori IceA2 protein
#=GF AU   Moxon SJ;0000-0003-4644-1816
#=GF SE   Pfam-B_9436 (release 8.0)
#=GF GA   25.00 25.00;
#=GF TC   25.50 27.20;
#=GF NC   24.70 24.80;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -E 1000 -Z 75585367 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   10767527
#=GF RT   Genetic organization and heterogeneity of the iceA locus of
#=GF RT   Helicobacter pylori. 
#=GF RA   Figueiredo C, Quint WG, Sanna R, Sablon E, Donahue JP, Xu Q,
#=GF RA   Miller GG, Peek RM Jr, Blaser MJ, van Doorn LJ; 
#=GF RL   Gene 2000;246:59-68.
#=GF DR   INTERPRO; IPR008655;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This family consists of several Helicobacter pylori specific
#=GF CC   IceA2 proteins. The function of this family is unknown.
#=GF SQ   6
#=GS A0A1B4XG28_9GAMM/1-59   AC A0A1B4XG28.1
#=GS A0A4V6YSL9_9HELI/1-52   AC A0A4V6YSL9.1
#=GS H8YX60_9GAMM/43-94      AC H8YX60.1
#=GS A0A4V6YSL9_9HELI/45-95  AC A0A4V6YSL9.1
#=GS A0A1B4XG28_9GAMM/44-94  AC A0A1B4XG28.1
#=GS H8YX60_9GAMM/1-54       AC H8YX60.1
A0A1B4XG28_9GAMM/1-59              .......MELALKIVNGRVEVYEDGAHRHSY.GSHIEDAATDGKIVAVVTRDGRIEEYRDGMCQRSY.........
A0A4V6YSL9_9HELI/1-52              .......MAYIVKIDQGKAKIYDGGSYKRSV.GSNVIACDCDDEWVACVE-K---------------nvvkqysis
H8YX60_9GAMM/43-94                 ......k--------NGRVEEYVNGSRKRTY.GSNAVNVQVSAGTVAVSLANGRTEEYVNGSRRRTY.........
A0A4V6YSL9_9HELI/45-95             vvkqysi----------------SGSYKRTYpDRDAVGVNVGGGSIAIRLANGKVKEYKA-------ssgsyvk..
A0A1B4XG28_9GAMM/44-94             ......d---------GRIEEYRDGMCQRSY.GSNARKIRISGNTLAVTLRDGRIAEFENGMCRRMY.........
H8YX60_9GAMM/1-54                  .......MAMVVKVNNGRVEEYENGSRKRSY.GLNVKAASTDGTLVAAVTKNGRVEEYVNG------s........
#=GC seq_cons                      ...............pGRlE.YcsGSpKRSY.GSNshsssssGshVAlshtsGRlcEYhsG...............
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