GenomeNet

Database: Pfam
Entry: L544_helical
LinkDB: L544_helical
Original site: L544_helical 
#=GF ID   L544_helical
#=GF AC   PF21657.1
#=GF DE   Nucleotidyl transferase L544, helical domain
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF AU   Chuguransky S;0000-0002-0520-0736
#=GF SE   ECOD:EF16807
#=GF GA   27.00 27.00;
#=GF TC   27.90 244.20;
#=GF NC   25.10 22.30;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -E 1000 -Z 75585367 HMM pfamseq
#=GF TP   Domain
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This is the helical domain found at the C-terminal of the
#=GF CC   nucleotidyltransferase L544 from Acanthamoeba polyphaga
#=GF CC   mimivirus.
#=GF SQ   8
#=GS A0A159ZRH0_MIMIV/213-356  AC A0A159ZRH0.1
#=GS M1NM92_9VIRU/211-354      AC M1NM92.1
#=GS G5CQN7_9VIRU/211-354      AC G5CQN7.1
#=GS YL544_MIMIV/213-356       AC Q5UQA5.1
#=GS A0A6N1NTI7_9VIRU/210-353  AC A0A6N1NTI7.1
#=GS A0A2P1EM64_9VIRU/211-354  AC A0A2P1EM64.1
#=GS L7RC52_9VIRU/211-354      AC L7RC52.1
#=GS K7YWL0_9VIRU/211-354      AC K7YWL0.1
A0A159ZRH0_MIMIV/213-356             YQLKLANYSKEYYFMLFPLRFYFKNDPTISKQLEYIIETKFGLYKQLLVRIDSYRTIYESGNLDLDTAKSIIISIIKDIRKLNGIDMNIIDKIQEVSNNSAGQDKIIAWNTLLTQLYTNINKSVNKQSKKYFTRYINIIPKEDR.
M1NM92_9VIRU/211-354                 YQLQLANYSREYYYMLFPLRFYFKNEKEISKEIDDIIEKKYGLYKQLMVRINDYNTLYESGNLNIKTATDIVLSIIRDVKNLKDFSSDTIYQIQKVAINNSPQVKMEDWNTLLKVLYKEINIDVNEKSKNYFYHYINLVPKPD-i
G5CQN7_9VIRU/211-354                 YQLQLANYSREYYYMLFPLRYYFKNNQDISQRLENIIEKKYGLYKQLMVRIDDYHTLYKSGNLKIDMATNIVIGILRDIEKLPGFESDTIYQIKKVATNNSPSIKIEEWDILLKVLYQEINTAVNNKSRKYFYRYIAMVPPQDR.
YL544_MIMIV/213-356                  YQLKLANYSKEYYFMLFPLRFYFKNDPTISKQLEYIIETKFGLYKQLLVRIDSYRTIYESGNLDLDTAKSIIISIIKDIRKLNGIDMNIIDKIQEVSNNSAGQDKIIAWNTLLTQLYTNINKSVNKQSKKYFTRYINIIPKEDR.
A0A6N1NTI7_9VIRU/210-353             YQIKLANYSNEYYYMLFPLRAYFRNNKKIHHELEELIEKKFGLYKQFMVRIDTYHILHDTKNLDIRTATSIVASIMKDLKNLPNFTTNTTNKIKEVSENNPPDVKMKEWYTLLNVLYDDINMAASIAAKEYFFKYLDMVPENIR.
A0A2P1EM64_9VIRU/211-354             YQLQLANYSREFYYMLFPLRFYFKNNKEISKEIDDIIEKKYGLYKQLMVRINDYNTLYESGNLNIKTATDIVSSIIRDIKNLKDFSSDTIYQIQKIAIDNPPQVKMEDWNNLLKILYKEINNDVNRKSRKYFYHYISLVPKPD-v
L7RC52_9VIRU/211-354                 YQLQLANYSREYYYMLFPLRYYFKNNKEISKEIDDIIEKKYGLYKQLMVRINDYTTLYESGNLDIKTATDIVLSIIRDVKNLKDFTSDTIYQIQKVAINNSPQVKMEDWNTLLKILYKEINFDVSKKSKKYFYHYINLVPKPD-v
K7YWL0_9VIRU/211-354                 YQLQLANYSREYYYMLFPLRYYFKNNQDISQQLENIIEKKYGLYKQLMVRIDDYHTLYKSGNLKIDMATNIVIGILRDIEKLPGFESDTIYQIKKVATNNSPSIKIEEWDILLKVLYQEINTAVNNKSRKYFYRYIAMVPPQDR.
#=GC seq_cons                        YQLQLANYSREYYYMLFPLRaYFKNNp-ISKcLEsIIEKKYGLYKQLMVRIDDY+TLYESGNLcIcTATsIVlSIIRDI+pLssFsSDTIYQIQKVApNNuPQlKhE-WNTLLKlLYpEINpuVNcKSKKYFY+YIslVPKpDR.
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