GenomeNet

Database: Pfam
Entry: Lactococcin
LinkDB: Lactococcin
Original site: Lactococcin 
#=GF ID   Lactococcin
#=GF AC   PF04369.17
#=GF DE   Lactococcin-like family
#=GF AU   Finn RD;0000-0001-8626-2148
#=GF SE   DOMO_DM04110
#=GF GA   23.10 23.10;
#=GF TC   23.30 23.40;
#=GF NC   22.10 20.50;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -Z 75585367 -E 1000 HMM pfamseq
#=GF TP   Family
#=GF WK   Bacteriocin
#=GF CL   CL0400
#=GF DR   INTERPRO; IPR007464;
#=GF DR   TC; 1.C.22;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   Family of bacteriocins from lactic acid bacteria.
#=GF SQ   6
#=GS A0A2P8C9W3_9BACT/1-33  AC A0A2P8C9W3.1
#=GS A0A2P8C9Y0_9BACT/1-31  AC A0A2P8C9Y0.1
#=GS A0A7X1ZB81_9LACT/1-30  AC A0A7X1ZB81.1
#=GS T0TGC4_LACLC/1-53      AC T0TGC4.1
#=GS T0S5F6_LACLC/55-103    AC T0S5F6.1
#=GS A0A2P8C9W9_9BACT/1-34  AC A0A2P8C9W9.1
A0A2P8C9W3_9BACT/1-33             ........m--NSLNLEILSTEELSTLKGG--QYGTV.I-------------------------------apggtil.........
A0A2P8C9Y0_9BACT/1-31             ........m--NSLNLEILSTEELSTVKGGQ------.--------------------------------dgtvippggt......
A0A7X1ZB81_9LACT/1-30             .........MENQLNFETVSDEKLTEVFGGHV-----.--------------------------------etfedaw.........
T0TGC4_LACLC/1-53                 .........MEIQTNFQIVSDEELSEIVGGGYPNNQSmNDVLHWLN------------------------ghndgnpkqlsngwvd
T0S5F6_LACLC/55-103               sdsgywtnt--------------------SNLTFIQN.TASGVLYYDQVNHKYVFAQTRGPMGAAIYV--fn..............
A0A2P8C9W9_9BACT/1-34             .........MKSISTFEILSNEELSTVKGGQVGTVL-.--------------------------------apggtil.........
#=GC seq_cons                     ...........sphNhEIlSsEELSplhGGph......................................sssss...........
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