#=GF ID   Lipoprotein_6
#=GF AC   PF01441.23
#=GF DE   Lipoprotein
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF SE   Prodom_1149 (release 99.1)
#=GF GA   27.80 27.80;
#=GF TC   27.90 73.60;
#=GF NC   25.40 27.60;
#=GF BM   hmmbuild --amino HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 --cpu 4 -E 1000 HMM pfamseq
#=GF TP   Family
#=GF RC   This family is discussed briefly on page 585.
#=GF RN   [1]
#=GF RM   9403685
#=GF RT   Genomic sequence of a Lyme disease spirochaete, Borrelia
#=GF RT   burgdorferi. 
#=GF RA   Fraser CM, Casjens S, Huang WM, Sutton GG, Clayton R, Lathigra
#=GF RA   R, White O, Ketchum KA, Dodson R, Hickey EK, Gwinn M, Dougherty
#=GF RA   B, Tomb JF, Fleischmann RD, Richardson D, Peterson J, Kerlavage
#=GF RA   AR, Quackenbush J, Salzberg S, Hanson M, van Vugt R, Palmer N, A
#=GF RL   Nature. 1997;390:580-586.
#=GF DR   INTERPRO; IPR001800;
#=GF DR   HOMSTRAD; Lipoprotein_6;
#=GF DR   SCOP; 1ggq; fa;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   Members of this family are lipoproteins that are probably
#=GF CC   involved in evasion of the host immune system by pathogens.
#=GF SQ   20
#=GS W6TGQ2_9SPIR/58-227  AC W6TGQ2.1
#=GS W6TFQ3_9SPIR/1-101   AC W6TFQ3.1
#=GS W6TFY7_9SPIR/47-216  AC W6TFY7.1
#=GS OSPC_BORBU/37-204    AC Q07337.1
#=GS W6TG21_9SPIR/2-120   AC W6TG21.1
#=GS W6TFN6_9SPIR/44-112  AC W6TFN6.1
#=GS W6TFP7_9SPIR/68-238  AC W6TFP7.1
#=GS W6TG18_9SPIR/26-195  AC W6TG18.1
#=GS W6TIX8_9SPIR/1-88    AC W6TIX8.1
#=GS W6TGT2_9SPIR/1-74    AC W6TGT2.1
#=GS W6TFV0_9SPIR/25-195  AC W6TFV0.1
#=GS W6TGG2_9SPIR/44-214  AC W6TGG2.1
#=GS W6TER4_9SPIR/2-158   AC W6TER4.1
#=GS W6TVR8_9SPIR/1-69    AC W6TVR8.1
#=GS W6TEQ5_9SPIR/1-145   AC W6TEQ5.1
#=GS W6TER1_9SPIR/1-102   AC W6TER1.1
#=GS W6TWU4_9SPIR/58-227  AC W6TWU4.1
#=GS W6TF11_9SPIR/31-200  AC W6TF11.1
#=GS W6TJ31_9SPIR/1-161   AC W6TJ31.1
#=GS W6TX59_9SPIR/1-94    AC W6TX59.1
W6TGQ2_9SPIR/58-227             ....VIDLKVVSKKIKDAVKFAEKVKEVHTLVKSVDEL.AKAIGKKIDAN.GSL.ADE...A..DHNGSLLAGVHSVISAVNTKLKGLETTD.NISDELKG....KIVAVGKEGKAFLDKLKEKNAALGKEG..AKDTDAKSAIDVTAN.TKDKGATELAKLNGTINELLNASNKIVSDVIAELVVKPT-i....
W6TFQ3_9SPIR/1-101              ...m------------------------HVLVKSVDEL.AKAIGKKIKQNfEEL.DVDngkN..NKNGELVAGVFQVMLTVKSKLEELWNTP.EISDELKG....KVAGSKNKCKEFVDKIKA-DSDIAKAE..VTDEH----------.----------------------------------------l....
W6TFY7_9SPIR/47-216             ....VIDLKGVSNKIKDAVEFAQGVKEVHTLVKSIDEL.AKAIGKKIKND.GGL.DTE...A..GKNGTLVAGVFSVALDVQTKLVALEAKT.-SDNELKK....QIVDVKTKGNAFIDKMKSKHNDLGKQDsaVTDNDAKAAIDRSN-.SGDKGATELSALNVSIDGLLKTVNEVLKTVISELLTSDK-k....
OSPC_BORBU/37-204               vkgp--NLTEISKKITDSNAVLLAVKEVEALLSSIDEIaAKAIGKKIHQN.NGL.DTE...N..NHNGSLLAGAYAISTLIKQKLDGLKNEG.-----LKE....KIDAAKKCSETFTNKLKEKHTDLGKEG..VTDADAKEAILKTNG.TKTKGAEELGKLFESVEVLSKAAKEMLANSVKELTSPV--va...
W6TG21_9SPIR/2-120              ..vv----------------------------------.-----------.---.---...-..-HTGPLVSGSYQIITSVNTKLKALELEA.EKFDGMKA....KILAAKTLGEGFLTKLKTAHSDIAKND..AQDTDVKKALVKDNG.DKTKRAEELGKLNTAINDLVNSAKELAENTIKKFTASTKK.....
W6TFN6_9SPIR/44-112             ....VIDLKVVSNKIRYAVEFAESVKEVHTLVKSVDEL.AKAIGKKVGAV.-GL.GDI...V..DHNRSLIAGAYSVID-------------.--------....---------------------------..---------------.----------------------------------------scg..
W6TFP7_9SPIR/68-238             ....VIDLKVVGDKIKSAVEFAGKVKEVETLVKSVDEL.AKAIGKKIHND.GSL.TTE...S..GKNGSLLAGAHSIISAIKTKLEALEQKAiDQFAAMKA....QVITAKTASTDLLNKFKDKNAELGKNE..ATDDDAKAAILISNG.TKDKGVDELVKLNTAITNLLTSAKDELDSAISKLTAKPV-k....
W6TG18_9SPIR/26-195             ....VIDLKVVSKKIKDAVEFLGKVKEVHVLVKSVDEL.AKAIGKKIKND.GGL.DTE...A..GKNGSLLAGVHSVISALKAKVELLEKTS.GIFNDLKT....KVTEVRNKVDAFLTKLKENHSDLGKHD..AADDDAKKAILVSNG.DKSKGATELTQLNSSIDELLTASNKIVSDSIAELVVKPT-a....
W6TIX8_9SPIR/1-88               ...v----------------------------------.-----------.---.---...-..----------------------------.----EFKA....KVTGVKDKCTVLVNKLKGGHAELGIEG..ATDENVQKAIDRTNKpNGDKGVAELIALNTAINELLKASNKIVSDAITELVVTPT-t....
W6TGT2_9SPIR/1-74               ...m---------------EFVTSVKEVHALVRSVGEF.AKAIGKKVTQN.TGViAAD...AggNNNGGLIAGAYSLISELNTKVKHWEKKM.EI------....---------------------------..---------------.----------------------------------------lln..
W6TFV0_9SPIR/25-195             ....VVDLKVVSKKIRDAVEFAGRVKEVETLVKSVDEL.AKAIGKKIKDD.GSL.DAE...A..NHNGSLIAGAFQVILTVETKLKELEKQD.ELSVEFKA....KVTGVKDRCTVLVNKLKGGHAELGIEG..ATDENVQKAIDRTNKpNGDKGVAELIALNTAINELLKASNKIVSDVIAELVVTPT-t....
W6TGG2_9SPIR/44-214             ....VIDLKVIGEKIKSAVEFAGKVKEVHTLVKSIDVL.AKGIGKKIKNA.DEL.DTV...A..DKNGTLVAAVFNLMLEIKTKLTNLETGT.DKFNGMKV....KVIAAKSECEKFIATVKSKNTDLGKDG..VTDTHAQEVMDIISKpSGDKGASDLVKLNTEIEKLLTAAHELTRDTINELIMPAH-e....
W6TER4_9SPIR/2-158              ..rw---------------EFAGKVKEVHTLVKSVDEL.AKAIGKKIKDD.GSL.DAE...A..DHNGSLIAGVFQLIVDAKVKLDALEQTV.GISNEMKG....KVSDVKTKAEAFSKKLKDNHTDLGKKD..ATDANAKKAIDIADA.TKDKGATELIALNTAIDGLLKGVEVAVASAIKELTTPPV-n....
W6TVR8_9SPIR/1-69               ...m------------------GKVKEVHTLVKSVDEL.AKAIGKKIENDdDGF.DDE...A..DKNGSLIAGVFSIVRAVGDGLSKLDTSN.--------....---------------------------..---------------.----------------------------------------isekl
W6TEQ5_9SPIR/1-145              ....-------------------------VLVKSVDEL.AKAIGKKIKND.GGL.DTE...A..GKNGSLLAGVHSVISVVKAKVELLEKTS.GISNDLKT....KVTEVRNKVDAFLTKLKDNHSDLGKHD..VSDDDAKKAILVSNG.DKSKGATELTQLNSSIDELLTASNKMVSDAISELVVKPT-a....
W6TER1_9SPIR/1-102              ...m----------------------------------.-----------.---.---...-..-----------------DTKLATLLGKA.ELSSDLST....KVNDAKVKSTAFLNTLKSSTTEFDKEG..ASDADSKKALFKDNA.DKTKGRDELDKLNTSIDILMASFKKELDDSIKKLIEEP--vr...
W6TWU4_9SPIR/58-227             ....VIDLKVVSEQIKETTAFLVGLKEVHVLVLSINDL.AKVIGKKIDAN.GSL.VDD...A..NHNGPLVSGSYQIITSVNTKLKALESEA.EKFDGMKA....RILAAKTLGEGFLTKLKTAHSDIAKND..AQDTDVKKALVKDNG.DKTKGAEELGKLNTAINDLVNTAKELAENTIKKLTASTKK.....
W6TF11_9SPIR/31-200             ....VIDLKVVSKKIKDAVKFAEKVKEVHTLVKSVDEL.AKAIGKKIDAN.GSL.ADE...A..DHNGSLLAGVHSVISAVNTKLKGLETTD.NISDELKG....KIVAVGKEGKAFLDKLKEKNAALGKEG..AKDTDAKSAIDVTAN.TKDKGATELAKLNGTINELLNASNKIVSDVIAELVVKPT-i....
W6TJ31_9SPIR/1-161              ...m--------------VEFLGKVKEVHTLVKSIDEL.AKAIGKKIKNDdDGF.DDE...A..DKNGSLIAGVFSIVRAVGDGLSKLDTSN.-ISGNFKAtissTINNAKTKSEAFLAKLKGQDANLGKND..ASSNDVKAAILKSNA.TKDKGLEELIALNTAIDALLKSATDMVEASIGELTVKS--iv...
W6TX59_9SPIR/1-94               ..mg----------------------------------.-----------.---.---...-..-------------------------KKD.GNSFELKT....KFDDVNKKCKAFLDKVKG-DSDLCKKD..VTDENAQKALDTNNA.TKDKGASELVALNTSIDGLLKSVTDMIEASIGELTVKP--iv...
#=GC seq_cons                   ...................tFhttVKEVHsLVKSlDEL.AKAIGKKIcss.suL.ss-...A..s+NGoLlAGsasllpslpsKLctLEpps.th.sphKs....KlsssKscscsFlsKLKstcu-LGKps..soDscsKpAl.hsNs.sKsKGssELstLNouIstLLpuupchlpssItELsspsh.h....
//