#=GF ID Mrpl_C
#=GF AC PF18502.5
#=GF DE 54S ribosomal protein L8 C-terminal domain
#=GF AU El-Gebali S;0000-0003-1378-5495
#=GF SE ECOD:EUF01394
#=GF GA 25.00 25.00;
#=GF TC 26.10 25.00;
#=GF NC 24.90 23.50;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch --cpu 4 -E 1000 -Z 75585367 HMM pfamseq
#=GF TP Domain
#=GF RN [1]
#=GF RM 24675956
#=GF RT Structure of the yeast mitochondrial large ribosomal subunit.
#=GF RA Amunts A, Brown A, Bai XC, Llacer JL, Hussain T, Emsley P, Long
#=GF RA F, Murshudov G, Scheres SHW, Ramakrishnan V;
#=GF RL Science. 2014;343:1485-1489.
#=GF DR INTERPRO; IPR040894;
#=GF DR SO; 0000417; polypeptide_domain;
#=GF CC This is the C-terminal domain of mitochondrial 54S ribosomal
#=GF CC protein L8.
#=GF SQ 30
#=GS Q6FPB1_CANGA/129-240 AC Q6FPB1.1
#=GS A0A1G4MFA3_LACFM/123-233 AC A0A1G4MFA3.1
#=GS G8JVI5_ERECY/124-237 AC G8JVI5.1
#=GS A0A3N4J057_9PEZI/119-172 AC A0A3N4J057.1
#=GS A0A1E5S0G2_9ASCO/165-281 AC A0A1E5S0G2.1
#=GS A0A4C2E9W7_9SACH/125-238 AC A0A4C2E9W7.1
#=GS Q758B4_ASHGO/124-233 AC Q758B4.1
#=GS G8ZT22_TORDC/125-237 AC G8ZT22.1
#=GS J8THU8_SACK1/129-238 AC J8THU8.1
#=GS A0A367YCF1_9ASCO/130-234 AC A0A367YCF1.1
#=GS H2ASQ8_KAZAF/129-237 AC H2ASQ8.1
#=GS J8Q0M7_SACAR/129-238 AC J8Q0M7.1
#=GS A7TQM6_VANPO/132-239 AC A7TQM6.1
#=GS A0A1G4JAI5_9SACH/123-235 AC A0A1G4JAI5.1
#=GS Q6CLM8_KLULA/126-243 AC Q6CLM8.1
#=GS A0A1S7H9V8_9SACH/125-238 AC A0A1S7H9V8.1
#=GS C5E369_LACTC/123-239 AC C5E369.1
#=GS A0A1E4TWP0_PACTA/122-216 AC A0A1E4TWP0.1
#=GS A0A7H9HMF8_9SACH/125-237 AC A0A7H9HMF8.1
#=GS G8BXK0_TETPH/141-253 AC G8BXK0.1
#=GS A0A376B1Q7_9ASCO/136-256 AC A0A376B1Q7.1
#=GS RM08_YEAST/129-238 AC P22353.4
#=GS A0A7H9B0Y6_ZYGMR/125-235 AC A0A7H9B0Y6.1
#=GS A0A1G4KGX2_9SACH/123-234 AC A0A1G4KGX2.1
#=GS G0W6V4_NAUDC/133-251 AC G0W6V4.1
#=GS A0A1S7HSZ5_9SACH/125-238 AC A0A1S7HSZ5.1
#=GS A0A0C7NEC3_9SACH/123-237 AC A0A0C7NEC3.1
#=GS G0VAA2_NAUCC/125-239 AC G0VAA2.1
#=GS A0A367YKD7_9ASCO/130-234 AC A0A367YKD7.1
#=GS A0A1X7R123_9SACH/130-248 AC A0A1X7R123.1
Q6FPB1_CANGA/129-240 .......g-DVAHPQ.PSIQRGNMKLWLLARATLTDESLARAHNPQTLLNLKKMLKFRDA..GD....VARDLLVV..RSLLREDM.........GLE.pVDKEQDHAAVTTLIQAA.......QAA..TPVSKKKVR....NDYKFETARP................................
A0A1G4MFA3_LACFM/123-233 .......s-PLFNSS.GEFQRGNLKLWLLCKTVMANEAEGTQYSELTLTNLKKMLKFTDD..VEs..fFTKHVLAV..KKLIAEQE.........GVV..WDKDRQLQLVKELKQQV.......VAQ..IPPKQADK-....-GFVYVQQRP................................
G8JVI5_ERECY/124-237 ........APVVDSD.GNLLKGNMKLWLIVKAILHANSKNEELHQMTLKNLHKLSKGMDR..DA....FLRDVRVV..REFILKKQ.........GVE..VNHEETDQFLQYIDTVIkd...ysVRE..HVPLAPKK-....VGYQFMKDRP................................
A0A3N4J057_9PEZI/119-172 .....gpr-------.------DMRFWMTARTIAHSRKEGKELSDITLLNVKKVTRFRKN..GQ....KELE----..--------.........---..-----------------.......---..---------....----------aaikkfe.........................
A0A1E5S0G2_9ASCO/165-281 nvveeiae-------.-VVNKGNMKLWMLMRTILKQEQEG-VIXPLTLQNLSKMIALKNE..TQvndfFSQDLLKM..RKVIRENS.........NEV..FNETEELEKLKLLQEKVf....efKEQ..QKSQKNKYF....KGYNKLTVRP................................
A0A4C2E9W7_9SACH/125-238 ........TPVIDAK.GKFQRGNLKMWLMVKNTLTDEQSGKPYSMLTLQNLKKMTLDKSR..EQ....LSNEILAI..RKFLVDED.........GDH..WDESQQQNSVQELLVQV.......YEK..DLKNLKENNrvynGGYRFAP-RP................................
Q758B4_ASHGO/124-233 ........QPLRGPD.GELQRGNLKLWLTVKAAMYAAEQGAAPSPLTVRNLVKLAHGKEL..EQ....FLADVADV..RRLLLEHQ.........GAA..-DSPEEAERFVGGLRSA......lEAP..AAAPAPPAR....KRYEFAP-RP................................
G8ZT22_TORDC/125-237 ........TPVVDKE.GNYNRGNMKLWLLVKNSVNDESSRRPYNAFTLKSLKKMLVGKAP..GQ....LATEILAI..RKFLKQNQ.........DSE..WNESLEKESVSLLLDQVn.....eLGS..TKPQSQTKR....GGYAFVSQRP................................
J8THU8_SACK1/129-238 .......s-PVMSES.HTVNRGNLKMWLLVKSVINDDANQLPHNPLTXQNLHKLAKFKPE..AQ....LHDEITLI..KKILFEEM.........SMP..YDEALEKERTQALLKQA.......CSI..PLPKKQRKP....SSYVMVA-RP................................
A0A367YCF1_9ASCO/130-234 ....dsky-------.------ELKFWYIAKTVARLELQGVPLDDLTELNVKKLTEFRPN..GEk..aFREAVTVC.kRKFFNEDK.........KTK.eVPEEVQENLT-------.......---..---------....----------nlpnmkmhtgdlkgkllvskryltkprp....
H2ASQ8_KAZAF/129-237 ........TPILDKD.GNLNKGNLKFWLLIKNVINDESQSKPYNDITIHNLQKMAKFKDR..KQ....FETEILTV..KRLLKGQA.........NQF..WDENSESGLVTLLVNQV.......YHT..VLSSKGHS-....-GYKFINERP................................
J8Q0M7_SACAR/129-238 .......l-PVVSES.ETVNRGNLKMWLLVKSVINDDANHLPHNPLTLQNLHKLAKFKPE..AQ....LHAEITLV..KKILFKEL.........SLP..YDETLENEKTQELLKQV.......CSS..SLPKKHAKP....SSYAMVP-RP................................
A7TQM6_VANPO/132-239 .......y-PTSTTD.GQLQRGNLKLWLLCKTTLLDESLGNDYAQLTLKNLHKQTLFKSK..DE....FINEIKSI..RSYLSPNQ.........---..--ESKDDDALNNLIDKIy.....sFKQ..TSPELNEQL....LGYKILDKRP................................
A0A1G4JAI5_9SACH/123-235 ........SPVLGHD.GAFQRGNLKLWLLCKNAIASESSNTAYTPLTLRNFAKMLKFKSN..RK...qFVSELLAV..RRFLKDEM.........SLP..WIEAHERKTTSQLLKLA......tGSA..LEPPKQVKP....LGYVVMEERP................................
Q6CLM8_KLULA/126-243 ........APVQNED.GQLLKGNLKLWLLTKTCMQQIEDAGQLAPKTVQNLKKMVHNKTL..DQ....LLHEIGVI..RKYILESQqqnsttevsELP.eFDETLQQQFLAAVKDQI.......--Q..NHTAEKKQP....DGYVFRE-RP................................
A0A1S7H9V8_9SACH/125-238 ........TPVMDAK.GNFNRGNMKLWLLVKNTLADENACRPYTILTLQNLRKIGLGKSR..EQ....LEREITAV..RKFLIEQE.........DLP..WDEPAQVGQVKTLLDQVyd...tdLKK..LREEDRARK....GGYRFVE-RP................................
C5E369_LACTC/123-239 ........TPVVDAA.GALQRGDIKLWLLCKTTIQNESKSVGYSQLTLRNFAKMLKFRKN..SHt..fFTNDVLAV..RKFIKQEQ.........GLD..WDEKHELKLVKQLKKQVln...eqAQP..AQTQTQPEA....PGYTYVQERP................................
A0A1E4TWP0_PACTA/122-216 .....edr-------.------EIKYWLLAKTMARLELQKQPLNDLTKKNLDKLLKHKDEagKQ....KFRDIVEIckKEFYANEE.........---..-----------------.......---..---------....----------slenlpqlkensngfnrsllkdqivmvprprk
A0A7H9HMF8_9SACH/125-237 ........TPVVDSE.GNFNRGNMKLWLLVKTIMHDESCNKPYNALTLKNLKKMLVGKAP..EQ....LRSEILAI..RRFLKEHQ.........GEE..WNETIETGLVDVLLEQV.......QQPssSTTKKGKKN....GGYAFVSQRP................................
G8BXK0_TETPH/141-253 .tldtdtd------A.VKLHRGNIKLWLLVKTVLYNEAHSLPHDQLTLKNLHTIAAYKTK..EA....FAKEIGAI..RSVLLQEIy.......nDKP..IVPEQETKTLDALITQI.......YNY..TKPEALQR-....RGFQVMQERP................................
A0A376B1Q7_9ASCO/136-256 ..nklkng------K.EEVVRGNMKLWILVKTIIQQEEEG-NIKELTLNNLNKYLKNKSP..DQidyfFNVDILKM..KQLLRSDN.........KLD.pVDEQIDKTKIQELRNNLlny.qtqLKT..VANNKNNAT....RGYVYVESRP................................
RM08_YEAST/129-238 .......s-PVMSES.HTVNRGNLKMWLLVKSVINDDANQLPHNPLTLQNLHKVAKFKAE..AQ....LHGEIMLI..KQVLLKEM.........SLP..YDEALENERTQALLKEV.......YSS..SLPKKTKKP....SSYVMVP-RP................................
A0A7H9B0Y6_ZYGMR/125-235 ........TPVLDAN.GNIQRGNMKLWIAVRYILRDEERGAGYKTVTLQNLNKMLLGKSK..EQ....LSSEILTI..KKLFKKND.........KLA..WDTVAEEKKVAQLMEQIn.....sVGA..TRSSSKKK-....PGYSLAE---di..............................
A0A1G4KGX2_9SACH/123-234 .......m-PVLDSA.GELKRGNMRLWLACKATIADELSGLNYTPLTLQNLYKLSKFKTN..VAq..fFQTDILAI..RRFIKEKE.........DLE..WNEVQEVKLVKELQNRV.......FAT..EKPARNVQ-....RGYQLFPNRP................................
G0W6V4_NAUDC/133-251 .pvktnst------E.MGLNKGNMKLWLLINNIVKSNHL-NDVKDITWKNLYKIGQFKDK..ET....FSNDILQI..TKFLKLNE.........NNTndWNESKEIDNVNKIIEKIysf.ipnKCK..TARINEFQK....KGYVIMDKRP................................
A0A1S7HSZ5_9SACH/125-238 ........TPIMDAK.GNFNRGNMKFWLLVKNTLADENAGRPYTILTLQNLRKIGLGKSR..EQ....LEQEIAAV..RKFLIEEE.........DLQ..WDEPEQMGQVKTLLNQVyg...tdLKK..LREEDRARR....GGYQFVE-RP................................
A0A0C7NEC3_9SACH/123-237 ........APVVDQK.GVFQRGNIKLWILCKTAIANETANVPYAPLTLQNFAKMFKFKSN..RNe..fFSRDVLAV..RRFIKEDS.........KLP..YDEATELQIIAQLQEQIk.....tLPE..QASSNTTKT....PGYTVVAERP................................
G0VAA2_NAUCC/125-239 ........SPVIDAN.GGLTRGNLKLWLLASYTINDEIASKAYKELTLQNLFKEAQYKPK..EQ....FTKEMLAI..RKYLKEEK.........KLE..WNEEVEKDRVSKLLDKV.......YNT..KKKSQDVGTkmgrGGYTLLKNRP................................
A0A367YKD7_9ASCO/130-234 ....dsky-------.------ELKFWYIAKTVARLELQGVPLDDLTELNVKKLTEFRPN..GEk..eFREAVTVC.kRKFFNEDK.........KTK.eIPEEVQENL-T------.......---..---------....----------nlpnmkmhtgdlkgkllvskryltkprp....
A0A1X7R123_9SACH/130-248 .......t-PIINPKtNQIQKGNLKFWLLVKNVIMDENSNVDVNPLTLINLKKIQNFKSD..EE....FLNDLLII..KKCIKDQE.........NLA..WDDTKELESIKNLMENVkstilphVDE..SSRTSPTIK....QGFEIMEKRP................................
#=GC seq_cons .........Plhstp.splpRGNlKLWLLsKsslpsEpputsassLTLpNL+KhscaKsp..cp....hpp-lhsl..R+hltccp.........sh...asEst-pptlptLhppl.......hpp..ttsppptp.....tGYthhp.RP................................
//
