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Database: Pfam
Entry: NCAP_ISAV_hel
LinkDB: NCAP_ISAV_hel
Original site: NCAP_ISAV_hel 
#=GF ID   NCAP_ISAV_hel
#=GF AC   PF21453.1
#=GF DE   Infectious salmon anemia virus nucleoprotein, helical bundle
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF AU   Chuguransky S;0000-0002-0520-0736
#=GF SE   ECOD:EF15061
#=GF GA   27.00 27.00;
#=GF TC   34.00 240.10;
#=GF NC   23.10 16.90;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF RC   Paper describing PDB structure 4ewc
#=GF RN   [1]
#=GF RM   24068932
#=GF RT   The crystal structure and RNA-binding of an orthomyxovirus
#=GF RT   nucleoprotein.
#=GF RA   Zheng W, Olson J, Vakharia V, Tao YJ;
#=GF RL   PLoS Pathog. 2013;9:e1003624.
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This entry represents the helical bundle of Infectious salmon
#=GF CC   anemia virus (ISAV) nucleoprotein that forms the head domain
#=GF CC   described in [1]. The head and body domains from this protein
#=GF CC   affect the equilibrium-state RNA binding.
#=GF SQ   2
#=GS NCAP_ISAV8/273-377    AC Q8V3T7.1
#=GS D5LGG1_9ORTO/273-377  AC D5LGG1.1
NCAP_ISAV8/273-377               KMMRTNGFNASYTTLAEGANIPSKYLRHMRNCGGVALDLMGMKRIKNSPEGAKSKIFSIIQKKVRGRCRTEEQRLLTSALKISDGENKFQRIMDTLCTSFLIDPP
D5LGG1_9ORTO/273-377             KMMRTNGFNASYTTLAEGANIPSKYLRHMRNCGGVALDLMGMKRIKNSPEGAKSKIFSIIQKKVRGRCRTEEQRLLTSALKISDGENKFQRIMDTLCTSFLIDPP
#=GC seq_cons                    KMMRTNGFNASYTTLAEGANIPSKYLRHMRNCGGVALDLMGMKRIKNSPEGAKSKIFSIIQKKVRGRCRTEEQRLLTSALKISDGENKFQRIMDTLCTSFLIDPP
//
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