GenomeNet

Database: Pfam
Entry: N_formyltrans_C
LinkDB: N_formyltrans_C
Original site: N_formyltrans_C 
#=GF ID   N_formyltrans_C
#=GF AC   PF18216.5
#=GF DE   N-formyltransferase dimerization C-terminal domain
#=GF AU   Smart A;0000-0002-6965-5633
#=GF SE   ECOD:EUF02953
#=GF GA   25.80 25.80;
#=GF TC   26.40 26.70;
#=GF NC   25.70 25.00;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 --cpu 4 -E 1000 HMM pfamseq
#=GF TP   Domain
#=GF RN   [1]
#=GF RM   24347283
#=GF RT   Three-dimensional structure of a sugar N-formyltransferase from
#=GF RT   Francisella tularensis.
#=GF RA   Zimmer AL, Thoden JB, Holden HM;
#=GF RL   Protein Sci. 2014;23:273-283.
#=GF DR   INTERPRO; IPR040660;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This is the C-terminal domain of N-formyltransferase found in
#=GF CC   Francisella tularensis. N-formylated sugars are observed on
#=GF CC   O-antigens of pathogenic Gram-negative bacteria. This C-terminal
#=GF CC   domain is responsible for dimerization. In particular, the beta
#=GF CC   hairpin motif present in the domain helps create a
#=GF CC   subunit-subunit interface. The dimeric interface is
#=GF CC   characterized by a hydrophobic patch formed by Ile 195, Leu 197,
#=GF CC   Val 201, Met 203, Ile 207, Phe 223, Val 231, Val 233, Leu 235,
#=GF CC   and Leu 237 from both monomers [1].
#=GF SQ   56
#=GS A0A6L9HHR4_9CLOT/187-238  AC A0A6L9HHR4.1
#=GS A0A6N6N3V0_9DELT/208-257  AC A0A6N6N3V0.1
#=GS A0A6N9NNG6_9FLAO/189-240  AC A0A6N9NNG6.1
#=GS A0A3E0U2H6_9GAMM/187-238  AC A0A3E0U2H6.1
#=GS A0A2S9Q813_9HYPH/145-194  AC A0A2S9Q813.1
#=GS A0A086BMU7_9FLAO/193-245  AC A0A086BMU7.1
#=GS A0A6B0GX21_9EURY/212-262  AC A0A6B0GX21.1
#=GS E3CXE6_9BACT/207-257      AC E3CXE6.1
#=GS A0A521AKQ5_9BACT/193-245  AC A0A521AKQ5.1
#=GS A0A4Y8ZXE6_9SPHN/196-247  AC A0A4Y8ZXE6.1
#=GS A0A086YTN7_9FIRM/23-61    AC A0A086YTN7.1
#=GS H0ADG2_HALSG/168-215      AC H0ADG2.1
#=GS A0A368MYL9_9GAMM/189-240  AC A0A368MYL9.1
#=GS Q82SX5_NITEU/206-259      AC Q82SX5.1
#=GS A0A1E3SMU7_MYCIE/174-225  AC A0A1E3SMU7.1
#=GS A0A1A3NFS8_MYCAS/177-228  AC A0A1A3NFS8.1
#=GS A0A0Q5TR60_9SPHI/204-256  AC A0A0Q5TR60.1
#=GS A0A4Q9VRM7_9HYPH/194-243  AC A0A4Q9VRM7.1
#=GS A0A0Q2QDT6_MYCGO/177-228  AC A0A0Q2QDT6.1
#=GS A0A3M8GD20_9FLAO/198-249  AC A0A3M8GD20.1
#=GS A0A1H5UTC9_9EURY/158-208  AC A0A1H5UTC9.1
#=GS A0A6N0NRR2_9EURY/169-219  AC A0A6N0NRR2.1
#=GS Q5NF01_FRATT/188-239      AC Q5NF01.1
#=GS A0A7D5GH95_9EURY/4-51     AC A0A7D5GH95.1
#=GS A0A8J7W5X0_9EURY/202-253  AC A0A8J7W5X0.1
#=GS T1DUQ3_9HELI/192-234      AC T1DUQ3.1
#=GS F8DAP5_HALXS/174-224      AC F8DAP5.1
#=GS A0A2K8V955_9FLAO/198-248  AC A0A2K8V955.1
#=GS B8FJQ8_DESAL/199-249      AC B8FJQ8.1
#=GS E1QM79_DESB2/199-249      AC E1QM79.1
#=GS A0A858X2A2_9HYPH/199-249  AC A0A858X2A2.1
#=GS A0A5Q0UHI2_9ARCH/170-219  AC A0A5Q0UHI2.1
#=GS A0A0S2HZU7_9BACT/203-255  AC A0A0S2HZU7.1
#=GS A0A8J8C9A5_9EURY/170-220  AC A0A8J8C9A5.1
#=GS A0A1I0MTP8_9EURY/171-221  AC A0A1I0MTP8.1
#=GS A0A1A2G8E6_9MYCO/77-128   AC A0A1A2G8E6.1
#=GS A0A329ZC25_9HELI/184-235  AC A0A329ZC25.1
#=GS SUGFT_MYCTU/177-228       AC P9WKZ3.1
#=GS R9KZ25_9FIRM/190-241      AC R9KZ25.1
#=GS A0A3D8I0T0_9HELI/186-237  AC A0A3D8I0T0.1
#=GS A0A1H6YH12_9EURY/170-220  AC A0A1H6YH12.1
#=GS A0A5B9P5Q8_9BACT/199-249  AC A0A5B9P5Q8.1
#=GS A0A1X2CIL8_9MYCO/177-228  AC A0A1X2CIL8.1
#=GS A0A6J4WWB0_9DELT/168-218  AC A0A6J4WWB0.1
#=GS A0A368L3Q1_9BURK/223-272  AC A0A368L3Q1.1
#=GS A0A7D5H6V7_9EURY/174-224  AC A0A7D5H6V7.1
#=GS A0A2W1KB60_9FLAO/198-248  AC A0A2W1KB60.1
#=GS A0A399SHN2_9BACT/190-241  AC A0A399SHN2.1
#=GS A0A6A9SIM7_9EURY/174-224  AC A0A6A9SIM7.1
#=GS A0A4R8DQ66_9BACT/198-249  AC A0A4R8DQ66.1
#=GS K6XJK5_9ALTE/192-242      AC K6XJK5.1
#=GS E4TQN2_MARTH/188-239      AC E4TQN2.1
#=GS A0A7U8TRQ7_MYCTX/177-228  AC A0A7U8TRQ7.1
#=GS A0A7I7MTA4_9MYCO/174-225  AC A0A7I7MTA4.1
#=GS A0A4Y6IDB5_9GAMM/187-237  AC A0A4Y6IDB5.1
#=GS A0A7U8TX00_MYCTX/177-228  AC A0A7U8TX00.1
A0A6L9HHR4_9CLOT/187-238             ......DFAALCRLDLDQRGTFGEFMRMLRAVT.FEG.Y.DN.AFFYD.QDGGKIYVEIRLRK..........
A0A6N6N3V0_9DELT/208-257             ....el--ENASELRRQQVYSWRQLLNLIRART.FRP.H.PA.CYFFQ.N-GKKVFIR-----snvt......
A0A6N9NNG6_9FLAO/189-240             ......DFIDLCELELDEKVTYREVINRLRALT.HGD.Y.KN.AYFFD.EEGRKVYVSVNLE-l.........
A0A3E0U2H6_9GAMM/187-238             ......DFKALCELDLNQKGTLQEHLNLLRALT.HGD.Y.AN.AHYIN.DEGEKVFVKIELAK..........
A0A2S9Q813_9HYPH/145-194             ..ldpk-----SQIDLDAPTTARELFNRLRART.FPP.H.RG.CRFTD.A-NNTYEVRIEITK..........
A0A086BMU7_9FLAO/193-245             ......DFNNLCKIDLQEQTTTGQFINKLRALS.HKS.F.KN.AYFIDpKSGKKVFISINIE-a.........
A0A6B0GX21_9EURY/212-262             ....ef--VDLCELDPDEELTTKELLDRLRALT.FPP.F.DN.ARIDV.D-GETYYVEVSITH..........
E3CXE6_9BACT/207-257                 ......DFRNMLEIDTKKTVVVGDFIKKLRAFT.FPP.Y.KN.LYFQE.N-GRRYYVEVVI--se........
A0A521AKQ5_9BACT/193-245             .....a-YKNLCEINLNETVTYGDAINRLRALS.HGK.Y.SN.AYFIDeKTKEKIFLNIVLK-q.........
A0A4Y8ZXE6_9SPHN/196-247             ......DFRELCALDLDQRGTLREHLALLRALT.HPP.F.KN.AYYDD.DAGNRIFVALDV--ev........
A0A086YTN7_9FIRM/23-61               ......DTDKIDKIEPDKFYKAIDLINIIRART.FPP.Y.KG.AYL--.--------------eym.......
H0ADG2_HALSG/168-215                 ......DLDEISNLDLEKEMTLREAINLLKGLT.FGD.K.KL.ASIDE.E----YFVGVNIEK..........
A0A368MYL9_9GAMM/189-240             ......DFNALRSLDLSSEGSLGEHIDLLRALT.HGD.F.NN.AYFLD.ENSEKIYIKISLNK..........
Q82SX5_NITEU/206-259                 .....k-FEKTCLIDLNKSYQGVEFFNLLRGLAfFED.S.KN.AYVIDdESGQKIYISLNLR-e.........
A0A1E3SMU7_MYCIE/174-225             ......DFAALRELDLTERGTFGAFLNRLRALT.HDE.Y.RN.AWFVD.ESGRKVFVRVVL--ep........
A0A1A3NFS8_MYCAS/177-228             ......DFARLRQLDLDEQGTFGQFLNRLRALT.HDE.F.RN.AWFVD.DSGRKVFVRIVLE-p.........
A0A0Q5TR60_9SPHI/204-256             ......DFKELCKLNLEEKLTMLEAINRLRALS.HGE.L.NN.AYFIDpDTGQKIFVTLNLKY..........
A0A4Q9VRM7_9HYPH/194-243             .lepas------LIDLDSAYRARDLFDLLRART.FTG.Y.PS.ARFVDgD--ETYEVSISIT-r.........
A0A0Q2QDT6_MYCGO/177-228             ......DFERLRQLDLDEHGSFGQFLDRLRALT.HDE.F.RN.AWFVD.SSGRKVFVRVVL--ep........
A0A3M8GD20_9FLAO/198-249             ......DLFKINEISLEENIRAGDLIDKLRALT.TNR.V.DEfAYFIH.N-SKKYALEIKIT-e.........
A0A1H5UTC9_9EURY/158-208             .....e-FDDLCELNPDEEVRVKDFLDRLRALT.YPP.Y.DN.AEIEV.D-GETYYIEVDITK..........
A0A6N0NRR2_9EURY/169-219             ...emd---DIVEIDRDEKVRAGELIDRLRALT.FPP.H.RN.AFFTE.K-GEKYFIEVEIT-p.........
Q5NF01_FRATT/188-239                 ......DYKNMCEIDLDKIVTMREAIDYLRAMT.HPP.Y.KN.SYFID.EHGNKVFVALELEK..........
A0A7D5GH95_9EURY/4-51                ......DFFDLCELGIDKTVAVHVFLNRLHALS.FPP.F.DN.NGIEE.G-GETYSVNI----w.........
A0A8J7W5X0_9EURY/202-253             ......DIHSIQKIDVNEPIKPKALINVLRALT.TNNiH.EA.AYFED.N-GNRYRVQISI--ik........
T1DUQ3_9HELI/192-234                 keidsa-----STIDLNKSYIARDLLNLLRAKS.FKP.H.KG.CVFK-.--------------asngg.....
F8DAP5_HALXS/174-224                 ......DFKELCRLDPDETVRVKEFLDRLRALT.FPP.Y.DN.AEIEV.D-GETYYVDIDITK..........
A0A2K8V955_9FLAO/198-248             ......DLESIQEINVDKNYKGKDIINLLRGLT.TNNiK.ES.AYFVE.N-GKKQYIQINI--i.........
B8FJQ8_DESAL/199-249                 ......DLKTIQEIKPNKLYTARELVDVIRART.FEP.H.PG.AHMVV.D-GKKVFMRLELYY..........
E1QM79_DESB2/199-249                 ......DVKKIDHIDLDKSYNARELIDILRART.FPP.H.AG.AYFVE.N-GRRVYVSLQLSH..........
A0A858X2A2_9HYPH/199-249             ......DLAELDEIDRARTYQARDLLNLLRART.YPP.Y.PA.AYDIE.S-GERRYLRVALS-e.........
A0A5Q0UHI2_9ARCH/170-219             ......DLEDERRIKLNEETSKEDFIDELRALT.YPP.H.RN.AYIER.N-GKKYHLELDI--v.........
A0A0S2HZU7_9BACT/203-255             ......DYEESNYIELDKKVTFGEVIDYLRGKT.FQD.K.SP.AFYIDrNTNEKIFVSIKFTK..........
A0A8J8C9A5_9EURY/170-220             .....e-FSELCELDPEAEYTVRELLDRLRALT.FPP.F.DN.AYVDV.D-GERYYLELSIT-p.........
A0A1I0MTP8_9EURY/171-221             ...efg---AVCELNLSEEARIGDVIDTLRALT.FPP.Y.YN.AYFEQ.D-GERYYVRVSI--ep........
A0A1A2G8E6_9MYCO/77-128              ..lepa-----SVIDLDAPTTARDLLNRLRART.FLP.H.PA.CRFYDgD---DVF-------evrvtidklr
A0A329ZC25_9HELI/184-235             ......DYKKICHIDLDEILSMRDAINRFRALT.HPP.H.KN.AYFLD.SNGEKIYIEITLTK..........
SUGFT_MYCTU/177-228                  ......DFEQLRRLDLNERGTFGHFLNRLRALT.HDD.F.RN.AWFVD.ASGRKVFVRVVL--ep........
R9KZ25_9FIRM/190-241                 ......DFERLCHIDMGQEATYGEVIDLLRAMT.FDT.Y.DN.AYFVD.SKGNKIYVSVNLK-r.........
A0A3D8I0T0_9HELI/186-237             ......DFKNLCKINLDKILTMQEAIDYLRALS.HKP.Y.KN.AYFID.KNGDKIFVSLKLQK..........
A0A1H6YH12_9EURY/170-220             ......DFVDLCRIDPEQTYEAKELIDILRALS.FPP.F.DN.AYIEI.D-GEKQYIEIEVT-p.........
A0A5B9P5Q8_9BACT/199-249             ......DTANIDRIDLDATVRAGDLIDVLRART.FPP.H.RG.AYFEV.D-GQRYFLELKIEK..........
A0A1X2CIL8_9MYCO/177-228             ......DFERLRQLDLNERGTFGQFLNRLRALT.HDD.F.RN.AWFVD.ASGRKVFVRVVL--ep........
A0A6J4WWB0_9DELT/168-218             ......DFKKLRKIDPQSTVRAIDFINFLRAMT.FPP.F.NN.AYIEQ.N-GKKYFVKIEIT-p.........
A0A368L3Q1_9BURK/223-272             ..ldaa-----SEIKLDHPYPARELLNRIRART.FPG.H.PG.CWFTD.D-GQTYEIQLTIRK..........
A0A7D5H6V7_9EURY/174-224             .....e-FDGLCELDPEETVQVKPFIDRLRALT.YPP.Y.DN.ARIEV.D-GETYTVEVDITK..........
A0A2W1KB60_9FLAO/198-248             ......DLEKVKELKLEEKYTAREILDKIRALTtNKD.S.EL.AFFVE.D-GKKVGVRVEF--i.........
A0A399SHN2_9BACT/190-241             ......DFNNFLLLDLEQKGTMEEILDKLRALT.HGT.Y.KN.AYYIDkQTGKKVFVSLQL--i.........
A0A6A9SIM7_9EURY/174-224             ......DFKDLCHLDPHEEVKVKELLNRLRALT.FPP.Y.DN.AEIEI.D-GDTYYIEIDIE-r.........
A0A4R8DQ66_9BACT/198-249             ....dl--GLLQPLDPEENVRTGDLLKRLRALT.TNK.TeEA.AYLIE.D-GRKYFIQVTM--tp........
K6XJK5_9ALTE/192-242                 ....el--EQASQINLEKQYRARDLLNLLRART.FSG.H.PS.CWFVD.D-GSKYEVTIKIKK..........
E4TQN2_MARTH/188-239                 ......DFKNLSEIDLDKKVSFREALDFLRAMT.HGD.Y.KN.AYFID.KKGDKVFVSIKLNK..........
A0A7U8TRQ7_MYCTX/177-228             ......DFEQLRRLDLNERGTFGHFLNRLRALT.HDD.F.RN.AWFVD.ASGRKVFVRVVL--ep........
A0A7I7MTA4_9MYCO/174-225             ......DFERLRHLDLNEHGTFGDFLNRLRALT.HDG.Y.RN.AWFVD.ASGRKVFVRVVL--ep........
A0A4Y6IDB5_9GAMM/187-237             ......DFNELCNLNLEHVGTLKEHIELLRALS.HGD.F.KN.AYFVDaD-EIKRYIKVDI--m.........
A0A7U8TX00_MYCTX/177-228             ......DFEQLRRLDLNERGTFGHFLNRLRALT.HDD.F.RN.AWFVD.ASGRKVFVRVVL--ep........
#=GC seq_cons                        ......DapplsclDL-cpssht-hlshLRALT.ass.a.cN.AaFh-.s.GcKhalplsl............
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