#=GF ID   Nepo_coat_N
#=GF AC   PF03689.19
#=GF DE   Nepovirus coat protein, N-terminal domain
#=GF AU   Mifsud W;0000-0002-9805-6461
#=GF SE   Pfam-B_3589 (release 6.6)
#=GF GA   27.30 27.30;
#=GF TC   29.20 60.20;
#=GF NC   27.20 19.10;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 --cpu 4 -E 1000 HMM pfamseq
#=GF TP   Domain
#=GF CL   CL0055
#=GF RN   [1]
#=GF RM   9519407
#=GF RT   The structure of tobacco ringspot virus: a link in the evolution
#=GF RT   of icosahedral capsids in the picornavirus superfamily. 
#=GF RA   Chandrasekar V, Johnson JE; 
#=GF RL   Structure 1998;6:157-171.
#=GF DR   INTERPRO; IPR005306;
#=GF DR   SCOP; 1a6c; fa;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   The members of this family are derived from nepoviruses.
#=GF CC   Together with comoviruses and picornaviruses, nepoviruses are
#=GF CC   classified in the picornavirus superfamily of plus strand
#=GF CC   single-stranded RNA viruses. This family aligns several
#=GF CC   nepovirus coat protein sequences. In several cases, this is
#=GF CC   found at the C-terminus of the RNA2-encoded viral polyprotein.
#=GF CC   The coat protein consists of three trapezoid-shaped beta-barrel
#=GF CC   domains, and forms a pseudo T = 3 icosahedral capsid structure
#=GF CC   [1].
#=GF SQ   2
#=GS POL2_SDVS5/944-1033   AC Q9WAL9.1
#=GS POL2_TORVR/1330-1421  AC P25247.1
POL2_SDVS5/944-1033              .HLFTKNLEIPSTADFCKELARYSGLTEAMSYRGASYYSRLLSGvaILRPHFKFTFRLVTPILESIPLFVVWDDLGQL.---NTKVSLLSSAFQ-v
POL2_TORVR/1330-1421             a-AYLGKVTCAKDAKGGTLLHTLDIIKECKSQNLLRYKEWQRQG..FLHGKLRLRCFIPTNIFCGHSMMCSLDAFGRYdSNVLGASFPVKLASL-l
#=GC seq_cons                    ..hahtplphspsAchsp.LtphshlpEshS.phhpYhph.hpG..hL+s+h+hphhlsTsIhpuhshhsshDshGph.....sts..lp.A...l
//