GenomeNet

Database: Pfam
Entry: Nuc_N
LinkDB: Nuc_N
Original site: Nuc_N 
#=GF ID   Nuc_N
#=GF AC   PF14448.10
#=GF DE   Nuclease N terminal
#=GF PI   NUC_N;
#=GF AU   Zhang D;0000-0001-8535-7620
#=GF AU   Iyer LM;0000-0002-4844-2022
#=GF AU   Aravind L;0000-0003-0771-253X
#=GF AU   Eberhardt R;0000-0001-6152-1369
#=GF SE   Zhang D, Iyer LM, Aravind L
#=GF GA   25.00 25.00;
#=GF TC   28.50 41.10;
#=GF NC   24.20 17.60;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -Z 75585367 -E 1000 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   21306995
#=GF RT   A novel immunity system for bacterial nucleic acid degrading
#=GF RT   toxins and its recruitment in various eukaryotic and DNA viral
#=GF RT   systems.
#=GF RA   Zhang D, Iyer LM, Aravind L;
#=GF RL   Nucleic Acids Res. 2011;39:4532-4552.
#=GF DR   INTERPRO; IPR027803;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This is a conserved short region that is found in many bacterial
#=GF CC   polymorphic toxin proteins [1]. It is often located before
#=GF CC   C-terminal nuclease domains [1].
#=GF SQ   6
#=GS Q813C4_BACCR/1-45         AC Q813C4.1
#=GS Q813C3_BACCR/20-77        AC Q813C3.1
#=GS Q65FQ0_BACLD/338-394      AC Q65FQ0.1
#=GS A0A2A8SIG7_9BACI/361-416  AC A0A2A8SIG7.1
#=GS A0A2A8SHW7_9BACI/1-40     AC A0A2A8SHW7.1
#=GS A0A073JUK8_9BACI/364-420  AC A0A073JUK8.1
Q813C4_BACCR/1-45                    ........m--------------PDGSV.VRSGTNYSGKFQEAHDASKASIQSRVSNLESGG...VKGTGN
Q813C3_BACCR/20-77                   .........ADSVSPIFKGVEILPDGSV.VRSGTNYSGKFQEAHDASKASIQSRISNLESGG...VKGTGE
Q65FQ0_BACLD/338-394                 .........ADALSDIARGAEAGAGGTL.VRKGSNYSAHVNDAHKASKAKMQDSIQRVEKE-...IEAGKS
A0A2A8SIG7_9BACI/361-416             kdfvlgksl------------APVDGVMgLNRGTNWEAAVKASHEESKGIIQSRISKLEESA...VKGTGD
A0A2A8SHW7_9BACI/1-40                .......mg-------------------.LRRGTNWEAAAKASHDESKGIIHNKISKLEES-...VKGTGE
A0A073JUK8_9BACI/364-420             .........FVSVKSL-----VPADGAMqLRRGTDLESRVKASHAESKADIQSRISKLEQEGrlnTKGTGD
#=GC seq_cons                        .....................h.sDGsh.lR+GTNapu+spsuH-tSKApIQSRIS+LEpuu...VKGTG-
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