GenomeNet

Database: Pfam
Entry: ODV-E18
LinkDB: ODV-E18
Original site: ODV-E18 
#=GF ID   ODV-E18
#=GF AC   PF10717.13
#=GF DE   Occlusion-derived virus envelope protein ODV-E18
#=GF AU   Mistry J;0000-0003-2479-5322
#=GF AU   Coggill P;0000-0001-5731-1588
#=GF SE   PRODOM_PD579825
#=GF GA   28.10 28.10;
#=GF TC   28.30 28.40;
#=GF NC   27.10 24.90;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -E 1000 -Z 75585367 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   8091653
#=GF RT   Transcription, translation, and cellular localization of
#=GF RT   PDV-E66: a structural protein of the PDV envelope of Autographa
#=GF RT   californica nuclear polyhedrosis virus. 
#=GF RA   Hong T, Braunagel SC, Summers MD; 
#=GF RL   Virology 1994;204:210-222.
#=GF RN   [2]
#=GF RM   17979668
#=GF RT   Molecular biology of the baculovirus occlusion-derived virus
#=GF RT   envelope. 
#=GF RA   Braunagel SC, Summers MD; 
#=GF RL   Curr Drug Targets. 2007;8:1084-1095.
#=GF DR   INTERPRO; IPR019655;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This family of occlusion-derived viral envelope proteins are
#=GF CC   detected in viral-induced intranuclear microvesicles and are not
#=GF CC   detected in the plasma membrane, cytoplasmic membranes, or the
#=GF CC   nuclear envelope. The ODV-E18 protein is encoded by baculovirus
#=GF CC   late genes with transcription initiating from a TAAG motif. It
#=GF CC   exists as a dimer in the ODV envelope and contains a hydrophobic
#=GF CC   domain which is putatively acting as a target or retention
#=GF CC   signal for intranuclear microvesicles [1].
#=GF SQ   17
#=GS A5IZL2_9BBAC/1-79      AC A5IZL2.1
#=GS Q91F32_GVCPM/1-81      AC Q91F32.1
#=GS Q0ILA7_NPVLS/1-81      AC Q0ILA7.1
#=GS A0A2H4UZQ1_9ABAC/1-83  AC A0A2H4UZQ1.1
#=GS A0A0M3N1X5_9ABAC/3-86  AC A0A0M3N1X5.1
#=GS Q7TLM5_NPVCF/4-85      AC Q7TLM5.1
#=GS K4ERT7_9BBAC/1-87      AC K4ERT7.1
#=GS Q918V8_GVCF/1-85       AC Q918V8.1
#=GS A0A346TQ74_9ABAC/1-81  AC A0A346TQ74.1
#=GS Q77KA2_9ABAC/1-81      AC Q77KA2.1
#=GS Q8B9B9_NPVR1/4-90      AC Q8B9B9.1
#=GS Q9J807_9ABAC/1-80      AC Q9J807.1
#=GS E18_NPVAC/4-90         AC P41701.2
#=GS Q462F4_9ABAC/4-81      AC Q462F4.1
#=GS A0A5C6PFC9_9TELE/2-57  AC A0A5C6PFC9.1
#=GS I3XMH3_NPVMB/1-85      AC I3XMH3.1
#=GS A0A0E3Z654_9ABAC/2-89  AC A0A0E3Z654.1
A5IZL2_9BBAC/1-79                 .....................MDTFRG----PEGSVGSRLGVLNPNLLMTILVTLVIIILLVMLINMSSNG-NSSGPA-....--T.QTAMFNPLNATMRNN.PVVTTATTT--ra.......
Q91F32_GVCPM/1-81                 .....................MDTFRG----TDTGVTRRIAGLEPSLLMTILVVLVIIILLVLLFNMSS-GSDSSGSGA....NNT.RTGFFNPLNTALRNN.PVVTT-NTTTT.........
Q0ILA7_NPVLS/1-81                 ....mddlrtgsssganrfnp-------------------TTMNPSTLMTVLIGLVIVILLIMLFQWSS--PNSSDKDP....NK-.-AFYTNPLNNTMRTN.PLMTTPQRTML.........
A0A2H4UZQ1_9ABAC/1-83             ...............mddlrt---------GGNGGIGRQLGMFNPNLLMTILISLVIIILLVLLFQSSSNGNGSSSPN-....NDA.ATRFVNPTNNIMRNN.PLLGNTQRTML.........
A0A0M3N1X5_9ABAC/3-86             ..dmrppttnatgrfmannpt--------------------FFNTSFLMTVLIVLVIVILLIMLFQSSSAGTGSSA--T....DVT.RFGYTNPLNATMRAN.PFVNTPQRTML.........
Q7TLM5_NPVCF/4-85                 .....................TDPATGTTTNTDATGNGYLNRLTPNTFLIILAVVVIVALVIIFIQSSSNGNNSSSPGA....T-P.QMGF--PLNTTMRAN.PFVATPQR---l........
K4ERT7_9BBAC/1-87                 .....................MDTFRG----AGDNATRRIAGLEPNLLMTILVVLVIIILLVLLFNMSS-GSDSSGSGGvanpNAA.NRNFFNPLNNAMRNNsPVVTTATTT--ra.......
Q918V8_GVCF/1-85                  .....................MDTFRG---TADTGVNRRIAGLEPNLLMTILVVLVIVILLVLLFNMSS-GSDSSGSGA....-NP.NAGFFNPLNTAMRNN.TVRNTPVVTT-attt.....
A0A346TQ74_9ABAC/1-81             .................mdin----RP--TTTTSGGGFNLSSVNTNTMMTVLIALVIIILIILLFQSSS----QPGGSS....PAQ.QTAYMNPLNATMRAN.PFVNTPQRNML.........
Q77KA2_9ABAC/1-81                 .....................MDDLRG-TTTTGAGRFN-PNMLNPSMLMTILIALVIIILLIMLFQSSSPGSKG----A....DTN.AFAFQNPLNATMRNN.PFVNTPQRTMM.........
Q8B9B9_NPVR1/4-90                 .....................TDPTTGATTSTDAPSTNYLNRLTPNMFLTILAVVVIIALIIIFVQSSSTGNNSSSPNT....PNA.NMGFVNPLNATMRAN.PFMNTPQRQML.........
Q9J807_9ABAC/1-80                 ...............mdinrs---------TTTTGGGFNLSSINTNTMMTVLIALVIIILIILLFQSSS----QPGGSS....PAT.QAAYMNPLNATMRAN.PFVNTPQRNML.........
E18_NPVAC/4-90                    .....................TDPTTGATTSTDAPSTNYLNRLTPNMFLTILAVVVIIALIIIFVQSSSNGNSSGGNVP....PNA.LGGFVNPLNATMRAN.PFMNTPQRQML.........
Q462F4_9ABAC/4-81                 .........lrspgttsrfnp-------------------NMFNPSMLMTILIGLVIIILLIMLFQSSSAGGGSSPANA....PPA.--GFTNPLNATMRAN.PFVNTPQRAML.........
A0A5C6PFC9_9TELE/2-57             .................dtwk--------------------------LLTIIIIIIIITIIIIIITITSSPSSSSSSSS....SPA.NEGTFAPM-------.-----------ldfpgqndm
I3XMH3_NPVMB/1-85                 ...............mdinrp----------TTTSSGFNLAGVSQNTMMMVLIALVIIILLILLFQSSSPGSSQNGGGNg..gGGG.GNTFVNPLNATMRAN.PFVNPAQRNML.........
A0A0E3Z654_9ABAC/2-89             ddmmapntnsagrfinnnptl---------------------FNTSTLMTILIGLVIVILLIMLFQSSSNGGNSSSPAD....PTAgRIAYTNPLNATMRAN.PFTNTPQRAM-m........
#=GC seq_cons                     ...............................ssss.s..lshlsPshLMTILlsLVIIILLIlLFQSSSsGssSSusss....sss.ptuahNPLNsTMRsN.PhlsTPQRsMh.........
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