GenomeNet

Database: Pfam
Entry: ORF45
LinkDB: ORF45
Original site: ORF45 
#=GF ID   ORF45
#=GF AC   PF17620.6
#=GF DE   Family of unknown function
#=GF AU   El-Gebali S;0000-0003-1378-5495
#=GF SE   PRODOM:PD105597
#=GF GA   27.00 27.00;
#=GF TC   410.20 410.10;
#=GF NC   26.60 23.20;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -E 1000 -Z 75585367 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF RN   [1]
#=GF RM   10049816
#=GF RT   Identification of additional genes that influence baculovirus
#=GF RT   late gene expression.
#=GF RA   Li L, Harwood SH, Rohrmann GF;
#=GF RL   Virology. 1999;255:9-19.
#=GF DR   INTERPRO; IPR035125;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   Family members found in alphabaculoviruses such as orf45 have
#=GF CC   been implicated in late gene expression when linked to orf41
#=GF CC   [1].
#=GF SQ   2
#=GS Q8B9K5_NPVR1/1-191  AC Q8B9K5.1
#=GS ORF45_NPVAC/1-192   AC P41450.1
Q8B9K5_NPVR1/1-191             MLPYEMVIAVLAYLSPAQILNLNLPFAYQKSVMFASNSAKVNELIRRRARDD.DDNPYFYYKQFIKFNFLTNKIINVYSKTEKCIRMTFDGRYMVTRDFLMCFVNKSYIKQLLREVDTRITLQQLVKMYSPEFGFYVNSKIMFVLTESVLAFICLKHSFGKCEWLDKNIKTVCLQLRKICINNKQHLTCLSY
ORF45_NPVAC/1-192              MLPYEMVIAVLVYLSPAQILNLNLPFAYQKSVLFASNSAKVNERIRRRARDDnDDDPYFYYKQFIKINFLTKKIINVYNKTEKCIRATFDGRYVVTRDVLMCFVNKSYMKQLLREVDTRITLQQLVKMYSPEFGFYVNSKIMFVLTESVLASICLKHSFGKCEWLDKNIKTVCLQLRKICINNKQHSTCLSY
#=GC seq_cons                  MLPYEMVIAVLsYLSPAQILNLNLPFAYQKSVhFASNSAKVNEhIRRRARDD.DDsPYFYYKQFIKhNFLTpKIINVYsKTEKCIRhTFDGRYhVTRDhLMCFVNKSYhKQLLREVDTRITLQQLVKMYSPEFGFYVNSKIMFVLTESVLA.ICLKHSFGKCEWLDKNIKTVCLQLRKICINNKQH.TCLSY
//
DBGET integrated database retrieval system