GenomeNet

Database: Pfam
Entry: PBP_N
LinkDB: PBP_N
Original site: PBP_N 
#=GF ID   PBP_N
#=GF AC   PF17093.9
#=GF DE   Penicillin-binding protein N-terminus
#=GF AU   Eberhardt R;0000-0001-6152-1369
#=GF SE   Jackhmmer:Q9A3C7
#=GF GA   30.00 30.00;
#=GF TC   60.90 60.90;
#=GF NC   28.80 27.20;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -E 1000 --cpu 4 -Z 75585367 HMM pfamseq
#=GF TP   Family
#=GF DR   INTERPRO; IPR031375;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This domain occurs at the N-terminus of some penicillin-binding
#=GF CC   proteins in Caulobacter species.
#=GF SQ   6
#=GS A0A2D2AVU7_9CAUL/4-131  AC A0A2D2AVU7.1
#=GS A0A0Q7T8H1_9CAUL/1-119  AC A0A0Q7T8H1.1
#=GS A0A318BC11_9CAUL/1-118  AC A0A318BC11.1
#=GS A0A0H3CES2_CAUVN/1-138  AC A0A0H3CES2.1
#=GS A0A4Q3S3V4_9CAUL/5-151  AC A0A4Q3S3V4.1
#=GS Q9A3C7_CAUVC/1-138      AC Q9A3C7.1
A0A2D2AVU7_9CAUL/4-131             ..s-DNWSLPPYRFEPEQEPAPEAAPN..PDSE-------PKAEFARGTGRK---PPKPPKPPKPPREpgGGFRWTSLFSW......--AGSPKLRWVWLSLLILILAGMVAVMAGLVYIDRKYLTDLPALPARDALFAVNRAPGIRFEDR
A0A0Q7T8H1_9CAUL/1-119             ...MNDWTLPPYRFDDGPKGQQPARPA..EF-----ASAPPPPPSEP----------PPPPPGRRPPE..EPFRADLKHAK......AK----RGRWIWWTLAVVVLLALLTAASGAGYVWWKYLRDAPPLPSREALFAVNRAPGIRFEDR
A0A318BC11_9CAUL/1-118             ...MNDWTLPPYKFDDTPA-----RPT..PP------AQGGFAPVPPSPP------EPPAQPPQRPPE..EPFRADLKPP-......--RKKGGWGWVWITLLVSALIGFIAVGGGAAYLWFKYLKDTPELPSREALFAINRAPGVRFEDR
A0A0H3CES2_CAUVN/1-138             ...MNDWTLPPYKFDDGKSPGEPPKPG..PASASDGVSQDPWAPQGPDPFRLSSDAATPPPPPEPPPE..EPFRADLKHAA......AKKKARKWGWVWGTLLVGFLLAVLSVAGGGAYVWFKYLKDTPALPSREALFAVNRAPGIRFEDR
A0A4Q3S3V4_9CAUL/5-151             dnd--RWRLEPFRFSDSRPAAEDPEPEaePAPAPRRAPFGKETPGKAKKVKPPEPARAPKVRKERVRK..ERVRKERPIADgsgwdrFKAGVAQLKWLWITLLVLFVLGAAAALGGGVYVWRKYLTDVPPLPDRAALFAVNRAPGIKFLDR
Q9A3C7_CAUVC/1-138                 ...MNDWTLPPYKFDDGKSPGEPPKPG..PASASDGVSQDPWAPQGPDPFRLSSDAATPPPPPEPPPE..EPFRADLKHAA......AKKKARKWGWVWGTLLVGFLLAVLSVAGGGAYVWFKYLKDTPALPSREALFAVNRAPGIRFEDR
#=GC seq_cons                      ...MNDWTLPPY+FDDupssupss+Ps..Psst...sutsPhAPtsPssh+....stsPPsPPc.PPE..EPFRADLKaAt......hKttst+htWVWhTLLVshLLuhluVuGGuuYVWaKYL+DsPsLPSREALFAVNRAPGIRFEDR
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