#=GF ID P_T4SS_TraN
#=GF AC PF20898.1
#=GF DE P-type Type IV secretion system, TraN
#=GF AU Lazaro Pinto Beatriz;0000-0001-6837-2941
#=GF AU Bateman A;0000-0002-6982-4660
#=GF AU Chuguransky S;0000-0002-0520-0736
#=GF SE ECOD:3481.1.1
#=GF GA 27.00 27.00;
#=GF TC 27.50 35.90;
#=GF NC 26.40 26.90;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch -E 1000 -Z 75585367 --cpu 4 HMM pfamseq
#=GF TP Family
#=GF RC Paper describing PDB structure 2ofq
#=GF RN [1]
#=GF RM 17244707
#=GF RT NMR structure of a complex between the VirB9/VirB7 interaction
#=GF RT domains of the pKM101 type IV secretion system.
#=GF RA Bayliss R, Harris R, Coutte L, Monier A, Fronzes R, Christie PJ,
#=GF RA Driscoll PC, Waksman G;
#=GF RL Proc Natl Acad Sci U S A. 2007;104:1673-1678.
#=GF RC Paper describing PDB structure 3jqo
#=GF RN [2]
#=GF RM 19946264
#=GF RT Structure of the outer membrane complex of a type IV secretion
#=GF RT system.
#=GF RA Chandran V, Fronzes R, Duquerroy S, Cronin N, Navaza J, Waksman
#=GF RA G;
#=GF RL Nature. 2009;462:1011-1015.
#=GF RC Paper describing PDB structure 3zbi
#=GF RN [3]
#=GF RM 23511972
#=GF RT Structure of a bacterial type IV secretion core complex at
#=GF RT subnanometre resolution.
#=GF RA Rivera-Calzada A, Fronzes R, Savva CG, Chandran V, Lian PW,
#=GF RA Laeremans T, Pardon E, Steyaert J, Remaut H, Waksman G, Orlova
#=GF RA EV;
#=GF RL EMBO J. 2013;32:1195-1204.
#=GF RN [4]
#=GF RM 12855161
#=GF RT F factor conjugation is a true type IV secretion system.
#=GF RA Lawley TD, Klimke WA, Gubbins MJ, Frost LS;
#=GF RL FEMS Microbiol Lett. 2003;224:1-15.
#=GF DR SO; 0100021; polypeptide_conserved_region;
#=GF CC TraN, a subunit of the P-type Type IV secretion system (T4SS)
#=GF CC encoded by the conjugative plasmid pKM101 from Escherichia coli,
#=GF CC is the homologue of the F-type T4SS protein VirB7
#=GF CC (Pfam:PF17413). This protein forms spokes radially crossing the
#=GF CC entire assembly of the T4SS in the periphery of the outer
#=GF CC membrane complex. It forms a complex with TraO (the homologue of
#=GF CC VirB9) that surrounds the inner ring formed by TraF (VirB10
#=GF CC homologue) [1-4].
#=GF SQ 2
#=GS D5QHZ0_NOVHA/4-52 AC D5QHZ0.1
#=GS A0A118DSM1_9BURK/1-63 AC A0A118DSM1.1
D5QHZ0_NOVHA/4-52 lwga------------AAVLCGCASMHVPPEPNMKHLVAVNQTLPPELMGHGATLSTT---------tgt
A0A118DSM1_9BURK/1-63 ....MILRLITAAALTVASLSGCGGFTPPPNPDMSHLVPANKTIPEELQGRVTPQSATWKKAGGKAQ...
#=GC seq_cons ................sAsLsGCuuhpsPPpPsMpHLVssNpTlP.EL.G+sss.SsT............
//
