GenomeNet

Database: Pfam
Entry: Pept_S41_N_bact
LinkDB: Pept_S41_N_bact
Original site: Pept_S41_N_bact 
#=GF ID   Pept_S41_N_bact
#=GF AC   PF21558.1
#=GF DE   Bacteroidetes, Peptidase, S41 family, N-terminal domain
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF AU   Lazaro Pinto Beatriz;0000-0001-6837-2941
#=GF SE   ECOD:EF24345
#=GF GA   27.00 27.00;
#=GF TC   29.40 28.40;
#=GF NC   25.80 24.60;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -E 1000 -Z 75585367 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This domain is found at the N-terminal end of Peptidase, S41
#=GF CC   family Bacteroides uniformis and similar proteins from
#=GF CC   bacteroidetes. It is found associated with Pfam:PF03572 and
#=GF CC   shows an alpha-beta configuration.
#=GF SQ   6
#=GS D9RT39_PREMB/128-221      AC D9RT39.1
#=GS A0A415ZZ59_9BACT/125-218  AC A0A415ZZ59.1
#=GS C9MPB7_9BACT/141-235      AC C9MPB7.1
#=GS R7EL45_9BACE/125-219      AC R7EL45.1
#=GS A0A3N2MXA5_9BACT/143-234  AC A0A3N2MXA5.1
#=GS A0A416G804_9BACE/162-246  AC A0A416G804.1
D9RT39_PREMB/128-221                 ............gdn----ITVIGNRVFINHPSVFAIKAGLQDKDEIVTVDGVPTNKWVMHNSKYVSASTDATRYLLSALTILCSYTSPIKTLGIIRHGKPITITIHLQ-s.
A0A415ZZ59_9BACT/125-218             ...........safp-----AYIDDTLFVDKPDMYLQRSGFNDKDRIIAVDGTPIKEWMDRNEKYISASTPEYKRLFTARSLFKSFTDTVKTYTVCRGADTLNLQLVL--qp
C9MPB7_9BACT/141-235                 ............qgd---NITVIENSVFVNHPSVFAIKAGLQDKDEIVTVDGVPTNKWVMCNSKYVSASTDATRYLLSALTILCSYTSPIKTLGIIRHGRPITITIHLQ-s.
R7EL45_9BACE/125-219                 ...............ANQRVAFIEDSLFVDKPSDYLTEYGFQDKDRIIAINGLPYKQWIEQNEKYTEASTVPHRRLRTAYDAFRSYADTLRNYTLLRGGDTLTVTLPLKQ..
A0A3N2MXA5_9BACT/143-234             ............fpt------VIHDSIFINKPNYTMTRAGLRDKDRVIAVNGEPVIDWMNRNEKYVSASTPLNRRLFTAANIFKSLSDTIRNYTVCRGNDTIEVKLPL--vt
A0A416G804_9BACE/162-246             rcdslyvtgsllalp-------------------------VRAGDRILSIDGKEASVWRDSMMQYVSASTDKARYKSTASWVFSSYTDSIRRLGLSRGDSVLFVDVPLS-r.
#=GC seq_cons                        ............t.s.....shIcsolFls+Pshahh+uGlpDKDRIluVDGhPspcWhppNpKYVSASTstsRhLhTAhslFpSYTDoI+shslhRGucslslslsLp.p.
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