#=GF ID   Phage_Arf
#=GF AC   PF17585.6
#=GF DE   Accessory recombination function protein
#=GF AU   El-Gebali S;0000-0003-1378-5495
#=GF SE   PRODOM:PD049896
#=GF GA   27.00 27.00;
#=GF TC   40.40 39.90;
#=GF NC   25.70 24.20;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -E 1000 -Z 75585367 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   25742714
#=GF RT   Bacteriophage lambda: Early pioneer and still relevant.
#=GF RA   Casjens SR, Hendrix RW;
#=GF RL   Virology. 2015;479:310-330.
#=GF DR   INTERPRO; IPR020293;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   Family members are found in Caudovirales such as Salmonella
#=GF CC   virus P22. Family members have a recombination accessory
#=GF CC   function [1].
#=GF SQ   17
#=GS H5UWI8_ATLHE/1-47      AC H5UWI8.1
#=GS A0A5C0CBM3_9CAUD/1-47  AC A0A5C0CBM3.1
#=GS A0A5C0CBP7_9CAUD/1-47  AC A0A5C0CBP7.1
#=GS I6S1M5_9CAUD/1-47      AC I6S1M5.1
#=GS B8K1E0_9CAUD/1-47      AC B8K1E0.1
#=GS A0A6B2FRJ7_9ENTR/1-46  AC A0A6B2FRJ7.1
#=GS A0A0N7CG59_BPP22/1-47  AC A0A0N7CG59.1
#=GS A0A7D7F2C1_9CAUD/1-47  AC A0A7D7F2C1.1
#=GS A0A4R6EZ95_9ENTR/3-52  AC A0A4R6EZ95.1
#=GS A0A5C0CAQ2_9CAUD/1-47  AC A0A5C0CAQ2.1
#=GS A0A513ZWZ1_9CAUD/1-46  AC A0A513ZWZ1.1
#=GS A0A5C0CC50_9CAUD/1-47  AC A0A5C0CC50.1
#=GS VARF_BPP22/1-47        AC P14112.1
#=GS I6R9C0_9CAUD/1-47      AC I6R9C0.1
#=GS A0A7L8ZHV6_9CAUD/1-47  AC A0A7L8ZHV6.1
#=GS A0A1R3Y5R4_9CAUD/1-47  AC A0A1R3Y5R4.1
#=GS A0A0N7CG08_BPP22/1-47  AC A0A0N7CG08.1
H5UWI8_ATLHE/1-47                 .....MLHDFNDEEFIALISPEI...EEEVEQQINLAAERNNPPITWAEFRGDFT.
A0A5C0CBM3_9CAUD/1-47             .....MLHDFDDDEFIALISPEI...EEEVEQQINLAAERQNPVISWDEFAGYYS.
A0A5C0CBP7_9CAUD/1-47             .....MLHDFDDDEFIALISPEI...EEEVEQQINLAAERQNPVISWDEFAGYYS.
I6S1M5_9CAUD/1-47                 .....MLHDFDDEEFIALSSPEI...EEEVEQQINLAAERQNPVISWDEFAGYYS.
B8K1E0_9CAUD/1-47                 .....MLHDFDDDEFIALISPEI...EEEVEQQINLAAERQNPIIGWDEFAGYYS.
A0A6B2FRJ7_9ENTR/1-46             ...mn---EMNEQEFIAEMSKQI...ADEYEEHVDLAAERIQPPITWEEFAGVYS.
A0A0N7CG59_BPP22/1-47             .....MQHEFSDEEFIALISPEI...EEEVEQQINLAAERQNPIIGWDEFAGYYS.
A0A7D7F2C1_9CAUD/1-47             .....MLHDFDDNEFIALIPPEI...EEEVEQQINLAAERQNPIISWDEFAGYYS.
A0A4R6EZ95_9ENTR/3-52             aaerw-----DDDAFVRLMSDVMatpQEEDSEPVNLAAERHNPVIPWGEFAGHF-n
A0A5C0CAQ2_9CAUD/1-47             .....MLHDFDDEEFIALISPEI...EEEVEQQINLAAERQNPVISWDEFAGYYS.
A0A513ZWZ1_9CAUD/1-46             .....-MHDFDDDEFIALISPEI...EEEVEQQINLAAERQNPVISWDEFAGYYS.
A0A5C0CC50_9CAUD/1-47             .....MLHDFDDEEFIALISPEI...EEEVEQQINLAAERQNPVISWDEFAGYYS.
VARF_BPP22/1-47                   .....MQHEFSDEEFIALISPEI...EEEVEQQINLAAERQNPIIGWDEFAGYYS.
I6R9C0_9CAUD/1-47                 .....MLHDFDDEEFIALISPEI...EEEVEQKINLAAERQNPVISWDEFAGYYS.
A0A7L8ZHV6_9CAUD/1-47             .....MQHEFSDEEFIALISPEI...EEEVEQQINLAAERQNPIIGWDEFAGYYS.
A0A1R3Y5R4_9CAUD/1-47             .....MLHDFDDDEFIALISPEI...EEEVEQQINLAAERQNPVISWDEFAGYYS.
A0A0N7CG08_BPP22/1-47             .....MQHEFSDEEFIALISPEI...EEEVEQQINLAAERQNPIIGWDEFAGYYS.
#=GC seq_cons                     .....MhHDFDD-EFIALISPEI...EEEVEQQINLAAERQNPlIoWDEFAGYYS.
//