#=GF ID   Phage_integr_3
#=GF AC   PF16795.9
#=GF DE   Archaeal phage integrase
#=GF AU   Eberhardt R;0000-0001-6152-1369
#=GF SE   PDB:4dks
#=GF GA   27.00 27.00;
#=GF TC   27.00 27.00;
#=GF NC   26.90 26.60;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF CL   CL0382
#=GF RN   [1]
#=GF RM   22593158
#=GF RT   The structure of an archaeal viral integrase reveals an
#=GF RT   evolutionarily conserved  catalytic core yet supports a
#=GF RT   mechanism of DNA cleavage in trans.
#=GF RA   Eilers BJ, Young MJ, Lawrence CM;
#=GF RL   J Virol. 2012;86:8309-8313.
#=GF RN   [2]
#=GF RM   22683788
#=GF RT   Structural and functional characterization of the C-terminal
#=GF RT   catalytic domain of  SSV1 integrase.
#=GF RA   Zhan Z, Ouyang S, Liang W, Zhang Z, Liu ZJ, Huang L;
#=GF RL   Acta Crystallogr D Biol Crystallogr. 2012;68:659-670.
#=GF DR   INTERPRO; IPR031857;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   Catalyses cleavage and ligation of DNA [1-2].
#=GF SQ   100
#=GS VINT_SSV1/176-331         AC P20214.1
#=GS A0A133UYN5_9EURY/87-257   AC A0A133UYN5.1
#=GS E0SPU8_IGNAA/164-316      AC E0SPU8.1
#=GS H6VZB8_9VIRU/149-309      AC H6VZB8.1
#=GS A0A550D542_9CREN/88-243   AC A0A550D542.1
#=GS Q5JDM7_THEKO/118-292      AC Q5JDM7.1
#=GS Q5JEI2_THEKO/124-286      AC Q5JEI2.1
#=GS A0A2T9WPQ2_9CREN/224-424  AC A0A2T9WPQ2.1
#=GS A0A370AKP2_9SPIO/126-287  AC A0A370AKP2.1
#=GS F2KR66_ARCVS/115-288      AC F2KR66.1
#=GS T0M0T9_9ARCH/83-156       AC T0M0T9.1
#=GS A0A2R4ZMK6_9CREN/231-407  AC A0A2R4ZMK6.1
#=GS A0A1P8KIR0_9PROT/191-337  AC A0A1P8KIR0.1
#=GS A0A133VNM4_9EURY/80-235   AC A0A133VNM4.1
#=GS A0A3S0QND5_9BACI/105-272  AC A0A3S0QND5.1
#=GS D2RF15_ARCPA/115-292      AC D2RF15.1
#=GS A0A3G8G957_9VIRU/151-313  AC A0A3G8G957.1
#=GS A0A133URR2_9EURY/89-256   AC A0A133URR2.1
#=GS Q6TDM9_9VIRU/180-335      AC Q6TDM9.1
#=GS A0A656YVP7_9EURY/69-236   AC A0A656YVP7.1
#=GS A0A133UQL6_9EURY/1-143    AC A0A133UQL6.1
#=GS A0A133VLM4_9EURY/200-366  AC A0A133VLM4.1
#=GS A0A0F7IDB7_9EURY/113-289  AC A0A0F7IDB7.1
#=GS G0EFM5_PYRF1/98-236       AC G0EFM5.1
#=GS B8D5S5_DESA1/254-431      AC B8D5S5.1
#=GS A0A133UVU7_9EURY/129-295  AC A0A133UVU7.1
#=GS A0A656YWW7_9EURY/87-257   AC A0A656YWW7.1
#=GS A0A133U3U8_9EURY/206-375  AC A0A133U3U8.1
#=GS A0A4E0Q235_9EURY/127-286  AC A0A4E0Q235.1
#=GS D2RFE6_ARCPA/100-266      AC D2RFE6.1
#=GS A0A133UL49_9EURY/176-343  AC A0A133UL49.1
#=GS A0A133UD72_9EURY/2-157    AC A0A133UD72.1
#=GS A0A2T9WXY3_9CREN/87-241   AC A0A2T9WXY3.1
#=GS Q980X9_SACS2/107-163      AC Q980X9.1
#=GS A0A1S5WVM4_9VIRU/175-330  AC A0A1S5WVM4.1
#=GS Q5JD00_THEKO/117-278      AC Q5JD00.1
#=GS Q9YE54_AERPE/137-300      AC Q9YE54.2
#=GS Q973D5_SULTO/113-270      AC Q973D5.1
#=GS Q6TRV6_9VIRU/198-348      AC Q6TRV6.1
#=GS A9D9I9_9CAUD/272-393      AC A9D9I9.1
#=GS A0A483CNQ0_9EURY/59-218   AC A0A483CNQ0.1
#=GS A0A1Q6DTZ4_9EURY/4-132    AC A0A1Q6DTZ4.1
#=GS M1SVA9_9VIRU/154-306      AC M1SVA9.1
#=GS A0A5J5H450_9BACI/107-272  AC A0A5J5H450.1
#=GS A0A484IJW0_9ARCH/182-296  AC A0A484IJW0.1
#=GS A0A133UIR1_9EURY/155-323  AC A0A133UIR1.1
#=GS A0A2U9IET9_9CREN/332-424  AC A0A2U9IET9.1
#=GS A0A0P6VWJ0_9BACI/111-274  AC A0A0P6VWJ0.1
#=GS A0A557SUA2_9ARCH/128-286  AC A0A557SUA2.1
#=GS E0STG3_IGNAA/252-430      AC E0STG3.1
#=GS A2BLY9_HYPBU/1-149        AC A2BLY9.1
#=GS A0A133UDZ2_9EURY/176-343  AC A0A133UDZ2.1
#=GS A0A1D2W7K1_9EURY/127-326  AC A0A1D2W7K1.1
#=GS A0A133UU26_9EURY/523-692  AC A0A133UU26.1
#=GS Q980X9_SACS2/175-280      AC Q980X9.1
#=GS R7GHM3_9CLOT/28-207       AC R7GHM3.1
#=GS G3CAW3_APOV1/221-384      AC G3CAW3.1
#=GS A0A1S5WVQ5_9VIRU/169-324  AC A0A1S5WVQ5.1
#=GS Q7LXJ1_SACS2/67-220       AC Q7LXJ1.1
#=GS A0A5B2YV22_9ARCH/164-335  AC A0A5B2YV22.1
#=GS A0A0M0G1C1_9BACI/96-257   AC A0A0M0G1C1.1
#=GS V6ARN3_9ARCH/104-255      AC V6ARN3.1
#=GS D2RFV8_ARCPA/129-288      AC D2RFV8.1
#=GS F2KSJ7_ARCVS/33-196       AC F2KSJ7.1
#=GS A0A5B2Z7Z2_9ARCH/132-290  AC A0A5B2Z7Z2.1
#=GS D2RGV2_ARCPA/162-319      AC D2RGV2.1
#=GS A0A2R4ZVQ6_9CREN/132-291  AC A0A2R4ZVQ6.1
#=GS A0A4P2VHR2_9ARCH/229-406  AC A0A4P2VHR2.1
#=GS D2RI01_ARCPA/132-302      AC D2RI01.1
#=GS Q5JGU6_THEKO/110-308      AC Q5JGU6.1
#=GS A0A2T9WTM6_9CREN/85-240   AC A0A2T9WTM6.1
#=GS A4YJ18_METS5/87-242       AC A4YJ18.1
#=GS D3S0B0_FERPA/154-325      AC D3S0B0.1
#=GS A0A133USH6_9EURY/155-323  AC A0A133USH6.1
#=GS W9DRB1_METTI/155-314      AC W9DRB1.1
#=GS S2EXC3_9ARCH/100-254      AC S2EXC3.1
#=GS S2E9N6_9ARCH/122-271      AC S2E9N6.1
#=GS A0A5B2YWY6_9ARCH/226-378  AC A0A5B2YWY6.1
#=GS A0A484I6T7_9ARCH/190-367  AC A0A484I6T7.1
#=GS A0A498H2R8_9EURY/131-294  AC A0A498H2R8.1
#=GS A8TKH3_9VIRU/169-324      AC A8TKH3.1
#=GS F4B8Y5_ACIHW/114-264      AC F4B8Y5.1
#=GS R9N3M3_9FIRM/162-332      AC R9N3M3.1
#=GS A0A557SXN5_9ARCH/179-356  AC A0A557SXN5.1
#=GS D1GF58_9VIRU/176-331      AC D1GF58.1
#=GS D2REV3_ARCPA/108-272      AC D2REV3.1
#=GS H2C891_9CREN/83-236       AC H2C891.1
#=GS A3DM16_STAMF/3-120        AC A3DM16.1
#=GS A0A133U2W1_9EURY/161-328  AC A0A133U2W1.1
#=GS A0A133USZ8_9EURY/1-57     AC A0A133USZ8.1
#=GS A0A0V8RW68_PYROC/96-274   AC A0A0V8RW68.1
#=GS A0A5J6SY74_9BACI/94-260   AC A0A5J6SY74.1
#=GS F9VP84_SULTO/1-89         AC F9VP84.1
#=GS D1GF92_9VIRU/186-341      AC D1GF92.1
#=GS Q6UG89_SSV2/169-324       AC Q6UG89.1
#=GS A0A1R1MMT3_9BACT/104-273  AC A0A1R1MMT3.1
#=GS D1GF26_9VIRU/195-348      AC D1GF26.1
#=GS A0A2Z5WQ62_9VIRU/180-333  AC A0A2Z5WQ62.1
#=GS A0A133VHS7_9EURY/123-262  AC A0A133VHS7.1
#=GS A0A510DTK2_9CREN/104-261  AC A0A510DTK2.1
VINT_SSV1/176-331                    ......................................................................................................................................i-YIPTLEEIKRTLQ.LAKDY..SENV...Y.FIY.RIALE...SGVRLSEILK...V.LKE.........--.P.............ERD...............IC.....G..N...D.......V.CY..Y...........P....LS.....WTR......G....Y.KGVFYVF.H.....ITP.....LK.....--..--............R...V...E.V.TK.W..A...IA............DFERRHKd......................................aIA.IKYFRKFVASK.M........A.ELSVP.........LD.IIDFIQGRKP....TRVLTQHYV.SLF.GI.AKEQYKKYAEW............................................
A0A133UYN5_9EURY/87-257              ......................................................................................................................................q-KVPDRKELERFYN.NIDGR.aGKKY...R.AFF.LIKAT...SGLRTNELTN...LtMEN.........LD.L.............EERmi...........epNH.....N..S...K.......T.KR..S...........Y....IS....fYNQ......E....T.EKVLKKF.L.....PHR.....KE.....DD..ER............L...F...Q.V.GE.S..N...VH............RKFRKISeka..................................nvkII.PKMLRKWFTKQ.M........Q.NSEIP.........GK.YIDAFCGRLP....RSVRAKHYT.DY-.--.-----------sperlkeiyena................................
E0SPU8_IGNAA/164-316                 ....................................................................................................................................qka---IEVGDIVGSLQ.VLKDR..RPDI...Y.ILY.LFMLY...SSVRFEHALR...L.FDE.........WN.P.............DEKlyisyl..nrnvkrlEC.....F..D...M.......F.CR..Y...........Y....MG.....KET......D....K.KPTGFAY.F.....PKQ.....LL.....AL..IEr..........yR...E...K.LpNK.R..R...IE............RIVSNLS.......................................iLK.PKMIRVSALRE.M........K.AVFGD.........TD.VWRFIT----....---------.---.--.-----------skfge.......................................
H6VZB8_9VIRU/149-309                 .....................................................................................................................................gk--FITTGELLEAYD.YFRKH.gRPEE...L.LLF.RILAY...SGIRLRHAVQ...L.LNS.........FS.R.............DKL...............IY.....H..E...N.......F.AK..Y...........P....LF.....KHE......G....T.KVVYYAY.M.....PRE.....LA.....EE..LF............Q...S...G.Y.TE.D..M...AR............KYLRYGK........................................VS.ASTIRKWFSTF.L........V.SKGVP.........PA.AVNYIQGRKP....KNVLDAYYV.QLE.KL.ADEAYSRVLP-d...........................................
A0A550D542_9CREN/88-243              ......................................................................................................................................l-YVPTLEEVRKTLM.LAKEY..SENV...Y.LVY.RLALE...SGARLSEILK...A.LSE.........--.P.............ERD...............VC.....E..G...D.......I.CY..Y...........P....LA.....WTR......G....Y.KGSYYLF.H.....ATP.....LR.....--..--............K...V...D.I.TR.Y..A...IH............DFERRHKd......................................aVA.IKYFRKFVSTQ.M........A.SLGIP.........FD.VIDFIQGRKP....TRVLTQHYV.SLF.GI.TKEQYKKYAEW............................................
Q5JDM7_THEKO/118-292                 ......................................................................................................................................k-VNVPDAQIREALK.YYEQK..DPIL...A.TIY.KTLVF...SGLRLKAVIE...L.FNE.........FD.P.............EKLi............lpRE.....Y..P...N.......I.AK..Y...........P....IH.....KQK......G....Q.KKAFYAY.L.....PRD.....FA....lTE..LE............Q...L...P.L.DY.E..H...VK............NRLRVKLrsvrn.............................teksvqFS.AAAVREWFATF.L........A.RKGCP.........FE.VINFIQGRAE....RGVLEKHYL.NLE.IL.ADEWYSSVVDD............................................
Q5JEI2_THEKO/124-286                 ......................................................................................................................................q-VFISNEELREAYI.ELTKH.yGKEA...E.VLF.KLLAF...TGLRLKHIVK...M.LNT.........YD.P.............QKL..............vIV.....N..E...K.......V.AR..Y...........P....MA....eHGK......G....T.KRAFWAY.M.....PAD.....FA.....RS..LE............R...M...S.I.TY.F..Q...AQ............PRTTYKR........................................VS.ASTVRKWFSTF.L........A.QRKVS.........ME.VIDFIQGRAP....RSVLERHYL.NLT.VL.ADEAYAKVVDD............................................
A0A2T9WPQ2_9CREN/224-424             .....................................................................................................................................pf--IPEITTVKQIFN.NIKDI..--GA...K.AFF.LLLAE...TGLRVGEVLS...LkLEQ.........VD.L.............EHRii...........rvMK.....E..S...E.......T.KR..A...........Y....ISflhesTAK......W....I.KEVYLPY.Re..efIRK.....YE.....SS..LR............K...L...-.-.--.-..-...--............------VeanptqginieewkaklfpfredslrveikeamrkvlgkeFR.LYDMRAFFTSY.M........I.NQKVP.........GT.IVNLLQGRAPpqefRIMEENYFV.ISE.IK.LREWYDKYAP-r...........................................
A0A370AKP2_9SPIO/126-287             .....................................................................................................................................qk--IITHEEYRILLE.DCTDS..--RI...E.ALA.RFLFN...TGIRISEALS...IrLRG........aYM.S.............DESvsfsv.....vgkgnSE.....R..D...I.......I.CD..R...........K....VWe...rAAE......V....F.QGKTWLF.E.....NTR.....SN.....KP..YD............P...V...Y.L.TQ.L..I...RR............YSEKKIGr......................................tVT.AHVFRHYFATT.Q........I.EKGMP.........IH.TLSKLLGHSS....VDITAQYYL.H--.--.-----------dvp.........................................
F2KR66_ARCVS/115-288                 .....................................................................................................................................ea--FTTDEKIIEALN.SPKVK.kDERR...Q.ILI.RLLAY...TGLRLREALE...L.LRT.........FD.K.............NKL...............EF.....H..G...N.......Y.AR..Y...........Pt.yeLK.....SKA......G....T.KRTYYAY.M.....PAD.....FA.....RQ..LK............R...I...D.I.KE.T..T...VK............GAKLADR.......................................iIL.PEQLRKWHTNF.LkrkikekkL.QLGVT.........AEtLINFIQGRVG....KAVIDRYYL.DLV.ED.ADELYTKIAD-e...........................................
T0M0T9_9ARCH/83-156                  .....................................................................................................................................gf--MPSDDKVNEIYR.KIDNE..--TM...K.TAF.SVLAM...SGIRIMELVK...M.MKE.........FD.R.............ERL...............IV.....N..Q...N.......L.AK..Y...........P....LN.....YFR......G....H.KKG----.-.....---.....--.....--..--............-...-...-.-.--.-..-...--............-------........................................--.-----------.-........-.-----.........--.----------....---------.---.--.-----------ilri........................................
A0A2R4ZMK6_9CREN/231-407             .....................................................................................................................................ay--EISIEDLRKTLE.YLRKK..HELY...Y.TIY.LLMLY...SGARLQHALK...L.IRE.........WN.P.............DQVvyipml..dresrrlVC.....F..E...G.......F.CR..Y...........Y....LG.....LRG......G....S.KPCEWVY.M.....PKE.....LV.....QM..IE............RhrgV...R.R.SR.T..L...VE............RYAKRHG.......................................lIQ.PKMLRKINWRI.-........V.ASAME.........RD.AARFMQSRFG...eLAISEALYE.NLL.EK.TDRQYPKALE-e...........................................
A0A1P8KIR0_9PROT/191-337             ....................................................................................................................................dry---LKEEEIKTLYN.YLKDD..-KKL...F.LFS.KIALT...TGARLASILF...I.SKK.........--.-.............DID...............FS.....N..N...L.......I.TL..Y...........D....LK.....KDQ......D....A.RVSYTAF.L.....TDE.....LS.....SL..LK............D...W...T.V.NH.E..L...ND............KIFNKDP........................................ST.IQKQMRIVIND.L........F.NKGID.........Q-.----------....---------.---.--.-----------ddrknravvhtlrhtfashlaingtpi.................
A0A133VNM4_9EURY/80-235              ......................................................................................................................................k-KIPPDEAIRDTYS.NLETL..--EF...K.TAY.LMLAS...SGMRRSELMS...L.TPE.........-D.I.............EFD...............--.....-..S...R.......M.--..V...........T....PN.....KRS......A....T.KGAWLTF.Y.....NAE.....TE.....EH..LD............R...L..gH.L.PN.Q..H...FP............DSYTRAFkea.................................ssgeIS.PQVLRQWFADK.M........G.RLGVQ.........DR.FVDAFCGRTP....KSVLANNYS.D--.--.-----------frprrlekiyk.................................
A0A3S0QND5_9BACI/105-272             ...................................................................................................................................qerl----TDRQLVHFYA.YIDSL..RPNA...R.AAF.YLMLG...SGARVSEVTN...L.LAE........dFK.V.............EGDq.............lFI.....D..I...K.......N.AK..W...........GsnrcIP....vVDR......K....A.TEVLFNY.L.....STL.....DV.....SS..LP............A...F...R.V.SK.R..T...LQ............TYATRFSekt..................................gipFS.CHVLRHTFATL.L........M.EKEIP.........IE.KIQYLLGHKS....VSM-TRHYT.QSA.--.-----------vidvsnlk....................................
D2RF15_ARCPA/115-292                 .....................................................................................................................................qa--FTTTDKIIKAYE.YLKSI.nSEKK...I.ILL.KLLIY...SGLRLTEACD...I.LKN.........FN.K.............SELt.............iLE.....D..K...G.......I.AR..Y...........D....LLa...mYKRid.sskAkaevT.KRAWVAY.M.....PAD.....FA.....KE..LLe.........vcP...I...E.I.SE.E..A...MK............GKRFCNG.......................................iIL.PNQLRKWFSNF.L........K.DNSVP.........ER.VIEFMTGKTP....ERVLRQFYF.DLL.RE.ADEEYSRIVD-k...........................................
A0A3G8G957_9VIRU/151-313             ......................................................................................................................................i-YIPTLEDIKRTLK.IAKEY..SENV...Y.LVY.RLALE...SGSRLSEILR...V.LEK.........--.P.............EKD...............IC.....D..V...GgtpttplL.CY..Y...........P....LS.....WQR......G....Y.KGVFYVF.H.....LTP.....LR.....--..--............K...V...D.I.TQ.W..A...IS............DFERRNKd......................................aIA.IKYIRKFVASK.M........A.ELGIP.........LD.IIDFIQGRKP....TRVLTQHYV.SLF.GI.AKEQYKKYAEW............................................
A0A133URR2_9EURY/89-256              .....................................................................................................................................sp---PSKEEIQKLYE.AMDSL..--RD...K.TIL.LMFAT...TGLRRNELFN...L.TRA........hID.F.............DKR...............MI.....T..-...-.......-.--..-...........-....PN.....ENS......R....T.KRTYVTF.Y.....NRE.....AE.....NH..LE............E...-...H.L.DK.K..D...SNkgifsirprsanR-----Ifrkksk............................kigietIT.PQDLRKWFAKE.I........R.NRGVS.........GE.HIDAFCGRIP....RSVRAKHYT.DYSpER.LKEVYE-----kad.........................................
Q6TDM9_9VIRU/180-335                 .....................................................................................................................................lk--VPTLEEVRETLD.KVKQY..-PSL...Y.LLY.RLLLE...SGSRLREALK...L.LNN.........YN.P.............QNE...............IR.....G..D...G.......F.SI..Y...........V....LN.....WTR......G....Q.KKSFYLF.H.....ITE.....LK.....--..AE............-...-...K.V.TE.G..Q...IT............SAVRRLN.......................................lVP.PKYIRKFVATK.L........F.ELGVS.........SE.VVDFLEGRTP....GNILTKHYL.DLL.TL.AKKEYKKYAEW............................................
A0A656YVP7_9EURY/69-236              .....................................................................................................................................le--IPDKGDLQKFFD.NIDMS..--KY...R.AIF.LFKAT...SGLRTSEVAS...L.KMD........nIN.F.............EKRmv...........vpNH.....D..G...N.......T.KR.sY...........V....TF.....YNR......E....T.ERELEEF.L.....PER.....RS.....GD..ER............L...F...Q.T.TV.R..P...IQ............KAFQRASdes..................................gikIS.PKTLRKWFAKE.M........R.NLNVS.........GE.HIDAFCGRLP....SSIRAKHYT.DLS.--.-----------perlrevyeea.................................
A0A133UQL6_9EURY/1-143               .....................................................................................................................................mf--------------.-----..----...-.---.--LAT...SGLRTGEVTG...L.EMDd......vdFD.K.............RKV...............IP.....N..H...Es.....tTkRS..Y...........V....TF.....YND......E....T.EEALNKY.L.....PKR.....KD.....GD..SR............I...F...Q.V.SS.N..P...LQ............KSFRKTSers..................................gvkIT.PKTLRKWFAKE.M........R.NLGVS.........GE.HIDAFAGRLP....QSVRAKHYT.SY-.--.-----------sperlkeiytra................................
A0A133VLM4_9EURY/200-366             .....................................................................................................................................gp---PTKDQIRNLYE.ALDTL..--RD...K.TIL.LMFAT...TGLRRNELMG...L.SEK.........--.-.............---...............--.....N..I...D.......F.AK..R...........M....VTp...nKNS......R....T.KRTYVTF.Y.....NNE.....AE.....DH..LE............K...-...Y.L.SE.K..D...IEeeif....pirpR-----Svnrifrkr........................skeagletVT.PQDLRNWFTEE.L........R.KKKIS.........GE.YIDAFCGRLP....RSVRGKHYT.DY-.--.-----------sperlkevyeea................................
A0A0F7IDB7_9EURY/113-289             ....................................................................................................................................giy---LKDEEIRQAYE.WLKEKwkDKDT...E.LLF.KLLVF...SGIRLDHALD...L.LYN.........FD.P.............RKL...............EF.....K..G...R.......V.AR..Y...........P....LT....dISN......E....I.KSGEYAF.M.....PAE.....FA.....RK..LR............K...Ik.kK.L.DY.Q..T...WE............NRINVKRwrgde.............................kykksrVD.ANAIRKWFGNF.C........L.GHDVS.........ES.ATEYFMGHAI....KGMGGKAYF.DLRdKL.SWREYEKIVD-k...........................................
G0EFM5_PYRF1/98-236                  ................................................................................................................................grvelde--------------.-----..KEWA...Q.TLQ.QAVLW...SGSRLKH-LW...L.LPR.........FT.S.............KRR...............IA.....-..A...G.......L.AV..Y...........D....LK.....ATI......G....R.KRVNVII.L.....PVD.....LE.....ER..LL............R...-...V.V.KE.Y..S...YE............SRREIKG........................................TP.ATCLRKIHYELcL........A.TASGE.........EElLCSFLHGRH-....RPVSVKHYM.MYV.--.-----------ahsvrk......................................
B8D5S5_DESA1/254-431                 ....................................................................................................................................pyp---INAEDLAKTMG.FLRTN..HEKY...Y.LVY.KLMLE...GGLRLSHALT...L.IET.........FN.P.............GEVievpgvgletkrlvcLH.....D..K...G.......F.CR..Y...........Y....LG.....VKD......I....A.KPCEWVY.F.....SLN.....TL.....RL..LEk.........yrG...S...R.I.SR.R..V...VE............KFVRGHG.......................................lLA.PKYMRKASWRL.M........I.QV-MP.........RE.VARFIQSRFG...eLKVSEARYE.DLL.GE.ADKYYPAYL--g...........................................
A0A133UVU7_9EURY/129-295             .....................................................................................................................................le--IPDKGDLRKFFD.NIDMS..--KY...R.AIF.LFKAT...SGLRTSEVAS...L.KTG........dVD.F.............EKR...............--.....-..-...M.......V.VP..-...........-....-N.....HDG......N....T.KRSYVTF.Y.....NRE.....TE.....RE..LEeffpkrengderL...F...Q.T.TV.R..P...IQ............KAFQRASdes..................................gikIS.PKMLRKWFAKE.M........R.NLNVS.........GE.HIDAFCGRLP....SSIRAKHYT.DLS.--.-----------perlrevyed..................................
A0A656YWW7_9EURY/87-257              ......................................................................................................................................q-KVPDRKELERFYN.NIDGR.aGKKY...R.AFF.LIKAT...SGLRTNELTN...LtMEN.........LD.L.............EERmi...........epNH.....N..S...K.......T.KR..S...........Y....IS....fYNQ......E....T.EKVLKKF.L.....PHR.....KE.....DD..ER............L...F...Q.V.GE.S..N...VH............RKFRKISeka..................................nvkII.PKMLRKWFTKQ.M........Q.NSEIP.........GK.YIDAFCGRLP....RSVRAKHYT.DY-.--.-----------sperlkeiyena................................
A0A133U3U8_9EURY/206-375             .....................................................................................................................................td--IVDKGDLQEFYK.HIDSL..--KY...E.AIF.LFKAS...SGLRLGEVTA...L.TV-.........-D.S.............EDV...............DF.....E..K...R.......M.VT..-...........-....PN.....HDS......P....T.KKSYLTF.Y.....NSE.....AE.....EK..LGeflperekgddrL...F...Q.T.NE.R..T...VQ............KSFRRTSkra..................................girIT.PKMLREWFSKE.M........R.NLGVA.........GE.HIDAFCGRLP....KSVRGRHYT.DFSeGR.LKEVY------eea.........................................
A0A4E0Q235_9EURY/127-286             ......................................................................................................................................e-VYITDEEVQEGYV.SCPT-..--EV...K.ILY.KLLVC...SGNRLIHLYR...M.LQL.........FN.E.............KKV...............VI.....D..G...D.......I.AH..Y...........P....SS....eFSS......G....N.KRTFQVF.F.....PTA.....YI.....SE..IKs..........fQ...S...P.D.KY.K..T...VS............KKLQVGR........................................VS.AKTIRKWHLNV.M........I.KEGVT.........ES.LADFIQGRAP....ATVGSAHYL.NKV.QQ.AKEEYKRIIE-k...........................................
D2RFE6_ARCPA/100-266                 ......................................................................................................................................e-IFIDTNELLEAWRdKISRR..SRKM...Q.ILF.KLFVY...SGVRGKQAVA...M.LNN.........FD.P.............LKI...............VY.....K..D...R.......I.AR..Y...........P....IA....nISK......G....S.KKGYWVY.M.....PSK.....FA.....KE..LVdfi......ksfN...G...K.M.TK.K..T...ID............NMRFG-R........................................VS.ASTIRKWHLNF.L........I.ENGVP.........ES.VADFIQGRAS....LTVGSTHYL.NKT.KQ.ADEWYSRVVD-r...........................................
A0A133UL49_9EURY/176-343             .....................................................................................................................................cn--IPDKKDLQEFYK.HISNE..--KY...R.AIF.LFLAT...SGLRTGEVTG...L.EMDd......vdFD.K.............RKV...............IP.....N..H...Es.....tTkRS..Y...........V....TF.....YND......E....T.EEALNKY.L.....PKR.....KD.....GD..SR............I...F...Q.V.SS.N..P...LQ............KSFRKTSers..................................gvkIT.PKTLRKWFAKE.M........R.NLGVS.........GE.HIDAFAGRLP....QSVRAKHYT.SY-.--.-----------sperlkeiytra................................
A0A133UD72_9EURY/2-157               .........................................................................................lyntmtkirdktvllmfattglrrnelfgltrenidfdrrmvtpde--------------.-----..----...-.---.-----...----------...-.---.........--.-.............---...............--.....-..-...-.......-.--..-...........-....--.....-NS......R....T.KRTYVTF.Y.....NQE.....AE.....NH..LE............K...-...H.L.DK.K..D...SNkgifsirprsanR-----Ifreksk............................kagietIT.PQDLRKWFAKK.M........R.DLGVS.........GE.HIDAFAGRLP....RSVRGKHYT.D--.--.-----------ysperlrevyed................................
A0A2T9WXY3_9CREN/87-241              ......................................................................................................................................v-YVPTLEEVVKTLE.LAKEY..SEDV...Y.FVY.RLALE...SGSRLSEILR...V.LKE.........--.P.............EKD...............VC.....D..S...G.......I.CY..Y...........P....LA.....WQR......G....Y.KGVFYVF.H.....VTP.....LR.....--..--............K...V...D.I.TR.Y..A...VA............DFERRRD.......................................aLA.IKYVRKFVASK.M........A.ELGIP.........LD.VIDFVQGRKP....TRVLTQHYV.SLF.GI.AREHYRKYAEW............................................
Q980X9_SACS2/107-163                 ......................................................................................................................................l-YIPTEEGIRKTLK.LAKEY..SENV...Y.FVY.RIALE...SGARLNEILK...V.LKK.........--.P.............EKD...............VC.....D..S...-.......-.--..-...........-....--.....---......-....-.-------.-.....---.....--.....--..--............-...-...-.-.--.-..-...--............-------........................................--.-----------.-........-.-----.........--.----------....---------.---.--.-----------add.........................................
A0A1S5WVM4_9VIRU/175-330             .....................................................................................................................................lk--VPTLEEVRQTFI.TVKQY..-PTL...H.TFY.RLLLE...SGSRETEALK...V.LND.........YN.P.............ENE...............IR.....E..E...G.......F.SV..Y...........I....LN.....WTR......G....Q.KKSFYLF.H.....VTE.....LK.....--..--............Q...I...K.I.SK.A..Y...VD............KYVRKLN.......................................lVP.PKYIRKFVATQ.L........L.SLGIP.........SE.IVDFLEGRTP....GNILTKHYL.DLL.TL.AKKEYKKYAEW............................................
Q5JD00_THEKO/117-278                 ......................................................................................................................................e-VFITNEDVRTAYN.EVQKR..GKPA...E.TLF.LLLVF...SGIRLKQAVE...L.LRT.........YD.P.............TKL..............yLI.....D..D...K.......A.AR..Y...........P....IF....sTSK......G....K.KKAFWAY.G.....PRD.....FF.....ER..LE............P...L...E.V.KY.N..T...AK............DLVAFGK........................................VS.ANSIRKWHYTF.L........I.QKGMP.........SE.IADFIQGRVS....GSVGATHYL.NKA.VL.ADEWYSAVVDD............................................
Q9YE54_AERPE/137-300                 ......................................................................................................................................t-YVPPDSSILEAAR.RLEGT..--RV...Y.HVF.LLLVG...SGARLSTVHW...L.LRQ........gLD.S.............SRLv.............cLE.....D..R...G.......F.CR..Y...........H....VD.....YVK......G....E.KLQWALY.S.....PRE.....FW....eRV..LEe..........pR...L...T.L.SY.N..R...VQ............EQIAGAG........................................VK.AKHIRNWVYNK.M........L.SLGMP.........EG.VVEFIVGHKA....SSIGRRHYM.NMI.VQ.ADMWYTTYL--pv..........................................
Q973D5_SULTO/113-270                 ......................................................................................................................................t-YVPTDAEVLKLRD.SLPN-..--EY...A.DVY.NVLIS...TGLRLTEVLY...L.LNN.........KD.K.............VRV...............VD.....L..G...E.......F.VR..I...........H....LD.....LMR......K....S.KNALVCY.L.....PKS.....VF.....ES..LK............P...L...K.A.HK.D..T...VS............DVFCDSG........................................LC.EKYLRKWFNQK.V........R.QVVKD.........RD.LAEFLEGRIS...gLSVGAVHYT.DLI.AL.ADKEYPKVFE-v...........................................
Q6TRV6_9VIRU/198-348                 ......................................................................................................................................y-RIPSLEEIKKVLN.HEDE-..--RI...R.ILY.RLLLE...SGIRLKEALF...I.LNN.........YD.P.............ALD...............QM.....E..D...G.......F.YV..Y...........T....VN.....LIR......K....S.KKSFYAF.H.....ITP.....LQ.....--..--............K...T...Y.I.TE.S..I...ID............HTDLP--........................................VK.PKFIRKFVATK.M........L.ELGIP.........SE.VVDFFQGRTP....SSILSKHYL.DLL.TL.AKKEYKKYAEW............................................
A9D9I9_9CAUD/272-393                 .................................................................................................................................aknats--------------.-----..----...-.---.-----...----------...-.---.........--.-.............NRD..............vLL.....S..P...S.......A.QK..I...........A....IR.....LIK......N....K.KANDYIF.Knn.rsPQG.....FF.....-K..PT............K...L...D.L.FL.K..G...VK............KRTKIDK.......................................iFT.THTFRHSYISI.L........A.QKGVP.........LQ.IIQQQTGHSN....SRVISQIYL.HIT.KK.AQQDFAN----klke........................................
A0A483CNQ0_9EURY/59-218              ......................................................................................................................................e-VYVSDEEILDAFL.ACPD-..--EL...K.PVF.KLLVY...SGSRFSHIYG...M.LKG.........FD.T.............QNV...............IV.....E..N...G.......V.AH..Y...........P....TS....gLSK......G....A.KKTFHVY.F.....PSS.....FL.....PE..LE............N...V...SeLkSE.D..Y...IL............RMIKHGR........................................VS.AKTIRKWHLNF.M........I.GHGVQ.........ES.VADFIQGRAA....VTVGSAHYL.NKV.KQ.ATDSYGSL---ile.........................................
A0A1Q6DTZ4_9EURY/4-132               ......................................................................................................tpsqidfnnraiypksnrhttkgqwvtfynkea--------------.-----..----...-.---.-----...----------...-.---.........--.-.............---...............--.....-..-...-.......-.--..-...........-....--.....---......-....-.-------.-.....-EN.....LL.....KE..LE............P...R...K.D.SG.K..E...IFdf.......vprT-----Ltrdmrkt.........................skkegimkIT.PQVLRIWFCNE.M........N.DLGVA.........DR.YIDAFCGRVP....KSVLAKHYT.DFT.--.-----------pnrlkeiydkad................................
M1SVA9_9VIRU/154-306                 .....................................................................................................................................lr--LVTEDEVKRALK.NSSG-..DEVA...H.YIL.SLLVE...SGLRLSEVVK...V.LNE.........YE.P.............SQD...............TA.....Y..N...T.......F.NV..Y...........N....VN.....WRR......G....R.KNTLYMF.H.....ISP.....LR.....--..--............Q...M...T.L.DY.E..N...TR............VKLAR-Y........................................ID.AKFMRKFVATK.M........F.ELEIP.........AE.VIDFIQGRAP....TTVATKHYI.YLF.TI.ARKYYEE----kwv.........................................
A0A5J5H450_9BACI/107-272             ..........................................................................................................................neietlsafeynq-----------LLK.KVKEDgnLRNI...T.IVY.-VLLH...TGIRVSELCS...L.NRSh......idLD.N.............HEL...............IV.....E..K...T.......N.EKrvI...........P....LS....qEAR......E....Y.LKNYLAS.H.....SAE.....EA.....VF..VSn..........aG...E...R.L.TE.R..A...VQ............YMLKKYQ........................................VN.PQKLRHTFCQR.L........I.DNKVD.........VE.TVSRLAGHKD....INVTKRY--.---.--.-----------ikssmnkqkveea...............................
A0A484IJW0_9ARCH/182-296             ..................................................................................................................mdlirtegttyidkkrmllmh--------------.-----..----...-.---.-----...----------...-.---.........--.-.............---...............--.....-..-...-.......-.YK..F...........P....NH.....FIR......V....S.KKAYVSI.I.....NEE.....IL.....--..--............Q...I...A.R.KS.E..Q...VT............SYNLMRNtfse................................ycvsMN.MYYCRKVFATF.L........R.NEGIE.........PE.IIDLLQGRIP....NSIFVRHY-.---.--.-----------yrpds.......................................
A0A133UIR1_9EURY/155-323             .....................................................................................................................................qs--VLSDQNLRKFYQ.DIQSD..--KY...R.AIF.LFYAS...SGLRTSEVLN...L.TME........dVD.F.............EKRml..........ipkNR.....S..R...T.......K.KS..Y...........V....SF.....YNS......E....S.EEALDKF.L.....PQR.....KP.....DD..DK............I...F...Q.V.SR.N..V...VA............KTFRRISkrs..................................gvkIT.PKMLRKWFCEK.M........R.RLNVD.........RG.YIDAFCGRVP....KTVLDSHYS.DFSpER.LKEVYE-----kan.........................................
A0A2U9IET9_9CREN/332-424             ......................................................................................................................dienwkaklfpfredil--------------.-----..----...-.---.-----...----------...-.---.........--.-.............---...............--.....-..-...-.......-.--..-...........-....--.....---......-....-.-------.-.....---.....--.....--..--............-...-...-.-.-R.T..K...IE............NEMRKILg.....................................stFR.LYDLRSFFASY.M........L.KRGAN.........PM.IVDFLQGRASp.kdFRILQNHYF.VIS.EIeLQQNYDKYAP-k...........................................
A0A0P6VWJ0_9BACI/111-274             .........................................................................................................................vlmkkdcemllsev--------------.--REHenERNI...A.IVY.-MLLH...TGIRVSELCG...L.NQS.........-D.L.............DFLeg..........nlkVM.....S..P...H.......G.EE..R...........V....IP.....LSD......E....L.KDHLTKY.L.....PLN.....PT....eKA..LFvs........ksN...E...R.L.TE.R..A...VQ............YMLKKYG........................................VN.AQKLRHTFCQQ.L........I.DKGVG.........LE.VVSKLAGHKD....INVTKKY--.---.--.-----------aksrvqhseyedai..............................
A0A557SUA2_9ARCH/128-286             .....................................................................................iklvigkyprfrnillfntltglrptealesynlllsssssyisndgkrl--------------.-----..----...-.---.-----...----------...-.---.........--.-.............---...............--.....-..-...E.......H.YK..Y...........P....TI.....FLR......R....T.KKAFISL.I.....NEN.....IL.....RL..VKd.........peN...S...I.P.NY.S..K...IR...........lTFQRN-Nq......................................nFK.MSYCRKVFATF.L........R.NEGVE.........AE.IIDLLQGRIP....NSIFLRHYY.---.--.-----------rppldkfnqlsklldk............................
E0STG3_IGNAA/252-430                 ....................................................................................................................................pyp---INLDDVRKTFE.FLKNN..HQVY...Y.TIY.RAMLE...SGARFEHVLK...M.IES.........WS.P.............NEVieipgigietkrlvcFE.....D..K...G.......F.CR..Y...........Y....MG.....LRE......S....E.KPCEWIY.I.....SLE.....TT.....EM..IQ............K...IvgkR.I.SR.Q..N...VW............RYAKRHG.......................................lIA.PKYMRKVAWR-.L........M.VKAMN.........RE.VARFIQSRLG...eLRISEARYE.DLL.SE.ADEAYPKYLQ-i...........................................
A2BLY9_HYPBU/1-149                   ......................................................................................................................................m--------------.-----..----...-.---.---LE...SGLRFEHALR...L.LASpilegsvvvYD.R.............VYPr.............lYC.....DegR...G.......F.CR..L...........Y....LG.....FNQ......G....V.KRAEFAY.F.....STK.....TRr..lvED..LT............P...W...S.V.HR.R..S...VE............RYVSRHG.......................................lMR.PGLLRKASWQL.L........I.ASGVP.........RE.VARFIHSRFG...eLRVSESYYE.GLV.RE.ADQWYPRYLK-h...........................................
A0A133UDZ2_9EURY/176-343             .....................................................................................................................................cn--IPDKKDLQEFYK.HISNE..--KY...R.AIF.LFLAT...SGLRTGEVTG...L.EMDd......vdFD.K.............RKV...............IP.....N..H...Es.....tTkRS..Y...........V....TF.....YND......E....T.EEALNKY.L.....PKR.....KD.....GD..SR............I...F...Q.V.SS.N..P...LQ............KSFRKTSers..................................gvkIT.PKTLRKWFAKE.M........R.NLGVS.........GE.HIDAFAGRLP....QSVRAKHYT.SY-.--.-----------sperlkeiytra................................
A0A1D2W7K1_9EURY/127-326             lsksdirtllgvakswkvkalilfeassgisgddilrftvddfnkgltkvydkntrkerticrftlkrgkttkefttfiseetvkaiqnylklervdptpsdplfttrkktkrslrvqglmgiyrrlnkfagwet--------------.-----..----...-.---.-----...----------...-.---.........--.-.............---...............--.....-..-...-.......-.--..-...........-....--.....---......-....-.-------.-.....---.....--.....--..--............-...-...-.-.--.-..-...--............------Engr..................................ynkAT.SHMLRKFFNTQ.M........I.NAGMP.........EE.IREHLMGHAI...dNKIRDAYFL.SNP.DE.LQRVYVQYMD-k...........................................
A0A133UU26_9EURY/523-692             .....................................................................................................................................td--IVDKGDLQEFYK.HIDSL..--KY...E.AIF.LFKAS...SGLRLGEVTA...L.TV-.........-D.S.............EDV...............DF.....E..K...R.......M.VT..-...........-....PN.....HDS......P....T.KKSYLTF.Y.....NSE.....AE.....EK..LGeflperekgddrL...F...Q.T.NE.R..T...VQ............KSFRRTSkra..................................girIT.PKMLREWFSKE.M........R.NLGVA.........GE.HIDAFCGRLP....KSVRGRHYT.DFSeGR.LKEVY------eea.........................................
Q980X9_SACS2/175-280                 ..................................................................................................................................dggis--------------.-----..----...-.---.-----...----------...-.---.........--.-.............---...............--.....-..-...-.......L.CY..Y...........P....LS.....WIR......G....S.KGSFYVF.H.....FSP.....LR.....--..--............K...V...T.I.GE.G..A...IA............GFERRRDg......................................aVA.IKYVRKFVASK.M........A.ELGIP.........LD.VIDFIQGRKP....TRVLTQHYI.SLF.GI.AKEHYRKYAEW............................................
R7GHM3_9CLOT/28-207                  ......................................................................................................................................l-IIPTPEEILRFKK.YMDNQ.aPLEY...R.VMF.YILID...TGLRRSSIAN...L.LITd......inLD.E.............QSIip..........shtKE.....N..N...E.......I.KV..YfgnktksliteF....IM.....LKK......G....L.KSKF-LF.P.....SKS.....PQ.....KP..IE............A...T...T.I.TK.I..F...IG............I-----Rnel.................................gipsIS.PHRLRHYFGTN.L........I.RNNVN.........PE.VVRKLLGHSS....IYM-TQRYI.NLN.DN.A----------lksasinysl..................................
G3CAW3_APOV1/221-384                 ......................................................................................................................................t-YVPPDSSILEAAR.RLEGT..--RV...Y.HVF.LLLVG...SGARLSTVHW...L.LRQ........gLD.S.............SRLv.............cLE.....D..R...G.......F.CR..Y...........H....VD.....YVK......G....E.KLQWALY.S.....PRE.....FW....eRV..LEe..........pR...L...T.L.SY.N..R...VQ............EQIAGAG........................................VK.AKHIRNWVYNK.M........L.SLGMP.........EG.VVEFIVGHKA....SSIGRRHYM.NMI.VQ.ADMWYTTYL--pv..........................................
A0A1S5WVQ5_9VIRU/169-324             .....................................................................................................................................lr--VPVLDEIKETLT.KVKQY..-PNL...Y.LLY.RLLLE...SGSRESEALR...V.LNN.........YD.P.............QNE...............MQ.....E..V...G.......F.SV..Y...........I....LN.....WTR......G....Q.KKSFYLF.H.....VTP.....IQ.....--..--............K...I...K.I.SK.A..Y...VD............KYVKKLN.......................................lVP.PKYIRKFTATK.M........L.ELGIP.........SE.VVDFLEGRTP....GNILTKHYL.DLL.TL.AKKEYKKYAEW............................................
Q7LXJ1_SACS2/67-220                  ......................................................................................................................................l-YIPSIDEVRQTLE.IAREY..SENI...Y.FIY.RLALE...SGARLSEILT...V.LRN.........--.P.............DRD...............VC.....-..E...D.......I.CY..Y...........P....LS.....WER......G....F.KRSFYIF.H.....ITQ.....LK.....--..--............K...I...D.I.TQ.W..A...VS............DFEKRYD.......................................vVK.IKYIRKFVATK.M........A.ELGIQ.........LD.IIDFIQGRKP....SRVLTQHYV.SLL.GI.AKENYKKYAEW............................................
A0A5B2YV22_9ARCH/164-335             ...........................................................................................................................kindenndinsm------------ID.WVRQS..VKQF...P.RFA.NVLIFntlTGLRPTEAVE...S.FNL.........LSsS.............SRD..............yLS.....K..D...Grr...leH.FR..F...........P....SI.....FIR......R....T.KKAFISI.M.....NKH.....IMn..lvKE..SK............Y...E...D.L.NY.S..K...IR...........lAFQRNNK.......................................kCN.MSYCRKIFATF.L........R.NEGVE.........PE.LIDLLQGRIP....NSIFVRHYY.---.--.-----------rpqletiynrvadk..............................
A0A0M0G1C1_9BACI/96-257              ....................................................................................................................................idv---LTKEECEGLLA.EVRES.rNARN...E.AIV.LTLLH...TGIRVSELCG...LdLTD.........LD.L.............ERGv.............vRV.....S..D...T.......H.GD..E...........R....VI....pLTD......A....L.KSSLTAY.LdevqpVGP.....LF.....VS..RS............R...E...R.L.TE.R..S...VQ............YMLKKFH........................................VN.AQKLRHTFCQQ.L........V.DRGVS.........LE.VVSRLAGHRD....INVTRRY-V.---.--.-----------ktavegsel...................................
V6ARN3_9ARCH/104-255                 ...............................................................................................................................yalaetlt--------ISRVAK.NIRAL..PPKY...T.LFA.TFALV...SGLRTEEAVR...A.FND.........--.-.............HLQ...............LC.....N..G...R.......V.I-..-...........E....MF.....WDR......R....T.KKANAVF.C.....HPI.....LH.....KK..IS............-...M...K.I.SY.N..S...IH............RHLHSRIl......................................gCQ.LRHLRKLNYTM.-........V.ATRID.........PL.LAEFMQGRRG....NISQRHYYL.PLM.R-.-----------ssyprwvrm...................................
D2RFV8_ARCPA/129-288                 ......................................................................................................................................e-VFITTEELLEAYE.NILP-..--KY...R.ILF.KLIVY...SGMRLDQACD...M.LAG.........YE.P.............ENL...............VI.....K..E...Dl.....eL.AR..Y...........P....MA....sIGK......G....F.KRAYWAY.M.....PIR.....FV.....SE..LE............R...T...F.I.KY.G..T...AK............KAIYYKR........................................VS.ALSIRKWHLNF.M........I.ENGVP.........ES.VADFIQGRAS....VTVGSTHYL.NKT.KQ.ADQFYSKLVD-k...........................................
F2KSJ7_ARCVS/33-196                  ....................................................................................................................................idl----KDEEIKEAYK.HFKEE..GNKY...DlILF.KLLVF...SGLRLAHVLE...A.LQT.........WN.P.............DNV...............RV.....Y..G...D.......V.AA..Y...........D....ME....tFIE......G....N.KKAFIML.F.....PAK.....ML.....KE..IE............R...F...P.E.SY.T.yN...VA...........rHHINYKR........................................VS.AITIRHWHYNF.M........IlDNGIP.........EG.VANFIQGRSP....ENIGSANYL.AKK.RG.AIQKYQEIVN-k...........................................
A0A5B2Z7Z2_9ARCH/132-290             .................................................................................................................fnpeaadmnkmihwlkdtirql--------------.-----..PNKY...S.NIL.LFATL...TGLRPSECWH...S.IRL.........IQ.N.............NKDh.............yVS.....K..D...K.......L.LH..Y...........Q....YPd...tFLR......R....T.KKVFISL.V.....SEQ.....II.....VI..AE............R...A...D.I.KK.P..Y...PQl..........cKIFRAMNl......................................sMN.MYYCRKIFATY.L........R.DKGIE.........PE.IIDLSQGRIP....KSMFLRHY-.---.--.-----------yrpdi.......................................
D2RGV2_ARCPA/162-319                 .......................................................................................................................................EYVPEDSKVIEVFR.KFKDE..--RY...K.ILF.KLLAF...SGIRLREALH...L.LRT.........FD.S.............NKL...............IT.....N..D...K.......I.AK..Y...........P....LG.....LDR......G....S.KKSYYAY.L.....PLE.....FS.....NE..LR............R...M...E.L.DE.D..A...VS............QYFAKKG........................................LP.AKYLRKWNYNF.L........I.LNGVP.........ES.VADFIQGRAS....ITVGSMHYL.AKV.KQ.ADEWYSRIIS-k...........................................
A0A2R4ZVQ6_9CREN/132-291             .....................................................................................rripsvdelidivsissdiyinyalfiyllsisglrpsevrhleirdiit--------------.-----..----...-.---.-----...----------...-.---.........--.-.............---...............--.....-..-...-.......-.--..-...........P....IM.....KGL......S....T.KRAYYCF.V.....TDN.....YLk..laSKlgLN............R...V...K.L.SS.T..G...VY............MARKAIKqr...................................ypwFT.LYSLRHFFATY.M........I.RKGMA.........EA.KVDFIQGRAP....RTVLRKYYI.HLD.--.-----------egealeelyreyre..............................
A0A4P2VHR2_9ARCH/229-406             ....................................................................................................................................pyq---IREEDAIRTFD.FLRAN..HRRY...Y.LVY.RIMLE...GGVRLEHALR...L.LET.........FS.P.............QEIvevpgi..svpiprlFE.....G..R...G.......F.AR..Y...........Y....LG....lVGS......S....T.KPCMWIY.L.....SPW.....TL.....EE..LRs.........taP...V...R.I.SR.R..V...VT............KYARAHD.......................................lLL.PKMVRKLAWRE.M........V.Q-SMP.........RE.VARFVQSRLG...eLKVSEARYE.DLL.SE.ADSAFPGYL--ra..........................................
D2RI01_ARCPA/132-302                 .......................................................................................................................................KIIPTDEDVREGFE.YYKRN.lAEEY...Y.LVA.LIIAF...SGARLRHVLR...M.LEE.........WD.P.............TYL...............VY.....T..D...D.......F.AR..Y...........E....IG....hLTM......G....H.KEGFWIY.M.....PTW.....LA.....KK..IR............R...M...K.L.SE.E..T...VK............TKKITYKaks..................................grlVT.SKYIRKWFNNV.L........A.DFEKD.........KD.VRSFIMGRPGd.igKSVEGEYYL.ELL.RR.ADKVYPLVMK-r...........................................
Q5JGU6_THEKO/110-308                 .....................................................................................................................................ak--VITSEDIREMFS.QLKGK..NETIlraR.KLYlKLLAF...TGLRGDEVRE...L.MNQ.........FD.P.............RVVeetfk....afglpeEW.....R..K...K.......I.AV..Y...........D....ME.....RVKlptrrhG....T.KRGYVAV.F.....PAE.....LV.....RE..LE............W...F...A.S.TG.Y..K...LT...........aDNSDKHKlfr.................................dytkVKdLALLRKFWQNF.M........N.DNVMStvpnppadaFH.LIEFLQGRAP....KTVGGRNYR.WNV.RN.AVRIYYYMVD-r...........................................
A0A2T9WTM6_9CREN/85-240              ......................................................................................................................................l-RVPTLEEVKRTLS.LAKEY..SENV...Y.FVY.RLALE...SGSRLSEILK...V.LKE.........--.P.............EKD...............IC.....D..G...S.......I.CY..Y...........P....LA.....WTR......G....Q.KSVFYVF.H.....ITP.....LR.....--..--............K...V...N.I.TM.W..A...IS............DFERRNEd......................................aLA.IKYFRKFVATK.M........A.ELGIP.........LD.VIDFIQGRKP....TRVLTQHYV.SLF.GI.AKEHYRKYAEW............................................
A4YJ18_METS5/87-242                  ......................................................................................................................................l-NIPTVDEVKRTLD.LAKEY..SENV...Y.FVY.KIALE...SGARLSEILK...A.LKD.........--.P.............SRD...............IC.....E..S...D.......I.CY..Y...........S....MA.....WQR......G....Y.KGVFYIF.H.....ITP.....LR.....--..--............Q...I...S.I.TE.S..A...IQ............DFERRRKn......................................aIR.IKYFRKFVASK.M........A.ELGIP.........LD.VIDFIQGRKP....TRILTQHYV.SLF.GI.AKENYKKYAE-y...........................................
D3S0B0_FERPA/154-325                 ......................................................................................................................................k-IFLTDKDVVKCFK.LIKEKwnDEVT...I.NLY.KLLVF...SGIRLEHAYR...L.LES.........FD.K.............RKL...............II.....E..G...K.......V.AM..Y...........P....IE....eITK......G....H.KKGYFAF.L.....PAE.....FA.....RK..LE............K...Y...D.M.MK.L..A...AY............KSRLTPKqwkp...............................pvdspVS.PIRIRAWFQNF.A........I.EHGVK.........TE.ALRFIVGHSP....ATVGEAHYY.NLK.KI.AKEEYKKIVDK............................................
A0A133USH6_9EURY/155-323             .....................................................................................................................................qs--VLSDQNLRKFYQ.DIQSD..--KY...R.AIF.LFYAS...SGLRTSEVLN...L.TME........dVD.F.............EKRml..........ipkNR.....S..R...T.......K.KS..Y...........V....SF.....YNS......E....S.EEALDKF.L.....PQR.....KP.....DD..DK............I...F...Q.V.SR.N..V...VA............KTFRRISkrs..................................gvkIT.PKMLRKWFCEK.M........R.RLNVD.........RG.YIDAFCGRVP....KTVLDSHYS.DFSpER.LKEVYE-----kan.........................................
W9DRB1_METTI/155-314                 ......................................................................................................................................e-IYVTDDEIQDALD.ACAV-..--DI...K.PIL.QLVIF...SGNRLSHVHA...M.VET.........FD.E.............RNV...............VI.....N..G...E.......V.AH..Y...........P....TS....aFSK......G....T.KRTFQIF.F.....PTS.....FI.....PV..LN............S...Ig.kP.Y.TY.N..H...YM............KKLRHER........................................VT.AKTIRKWHLNL.M........I.SEGIP.........ES.IADFIQGRAP....VTVGSAHYL.NKV.MQ.AKEAYSKLVK-r...........................................
S2EXC3_9ARCH/100-254                 .................................................................................................................................ywmann------VSIEKIVE.NIRKL..PEKY...Q.IFA.MFVLV...SGLRTSEAID...A.FNN.........HD.-.............--K...............IC.....H..N...G.......I.L-..-...........E....IF.....TDR......N....T.KKTNAVY.C.....HPF.....LH.....DK..IN............F...-...K.I.SN.T..G...TY............RNLNSKYl......................................gCE.IRYLRKLNYT-.L........I.AMKID.........GM.MAQFMQGRKG....DVSQRHYFL.PMM.SQ.NQKKWNKL---wnk.........................................
S2E9N6_9ARCH/122-271                 ................................................................................................................................klpkeql-------SINHVLD.NITKL..EPLY...S.DFA.LFMLT...SGLRTIEART...V.FEN.........--.-.............HKK...............FC.....H..D...G.......T.I-..-...........E....IF.....WHR......K....T.KNANATF.C.....HPL.....LH.....DK..MD...........kD...L...K.F.DY.D..H...FK............KLECE--........................................--.LRFLRKLNYTI.V........A.T-KID.........PL.LANFMQGRTG....DVSQRHYFL.PMM.SQ.HRK--------kwikiwh.....................................
A0A5B2YWY6_9ARCH/226-378             ...................................................................................................................pslrstlkncdipighrnil--------------.-----..----...-.---.LYCTM...TGLRASEAIEsikL.IKN.........-E.N.............SRLk.............yIS.....N..D...Ke.....mI.KH..Y...........E....FPe...iFIR......R....T.KKAYCSV.I.....IAD.....LI.....EL..VF............S...C...S.V.MNvA..A...FR............SYFTKRKi......................................pLN.MNYGRKIFATY.L........R.NKGIE.........PE.IIDLLQGRIG....SSVFVNHYY.---.--.-----------rpdik.......................................
A0A484I6T7_9ARCH/190-367             ......................................................................................................................................l-YIVDDSYIEERLK.QLFSI.gEGEI...A.TII.RFGIF...SGLREDEMLY...V.YNK........dIC.P.............DKSgcsc......sklhvIE.....K.pN...G.......V.SV..V...........L....IQ.....WHR......G....H.KKCYFTL.V.....PTK.....VL.....KE..FK............S...M...D.D.FE.YrpH...IRsa........heY-M---Kvkt.................................kddkIT.FMWLRKAHYNV.M........C.RVMKP.........FE.-ANVLAGRA-....KSVDAKHYA.---.--.-----------myeldemsqkyaeaw.............................
A0A498H2R8_9EURY/131-294             ......................................................................................................................................e-IYVSNDEIREAYE.HCPD-..--EL...K.TFF.RLMMY...SGSRGTHLIG...L.IKS.........FD.I.............RQV...............II.....D..EeypE.......V.AH..Y...........P....TS....eLAK......G....T.KRTFHVY.F.....PAS.....LV.....SE..LK............C...Y...S.L.PY.E..HedtIY............KKLAHDR........................................VN.SKTIRKWHMNF.M........I.KQRVT.........ES.IADFIQGRAA....ATVGSAHYL.NKV.QN.ATEEYEKLI--gk..........................................
A8TKH3_9VIRU/169-324                 ......................................................................................................................................l-RVPTLEEVKRTLE.VVKSN..-YSL...Y.LLY.RLLLE...SGSRESEALK...V.LND.........YN.P.............QNE...............MQ.....E..V...G.......F.SI..Y...........I....LN.....WTR......G....Q.KKSFYLF.H.....VTE.....LK.....--..--............Q...I...K.I.SK.A..Y...ID............KYVKKLS.......................................lVP.PKYIRKFVATQ.M........L.SLSIP.........SE.VVNFIQGRTP....SEVLTKHYL.DLL.TL.AKKEYKKYAEW............................................
F4B8Y5_ACIHW/114-264                 ......................................................................................................................................y-RIPSIEEIKKVLN.HEDE-..--RI...R.ILY.RLLLE...SGIRLKEALF...I.LNN.........YD.P.............ALD...............QM.....E..D...G.......F.YV..Y...........T....VN.....LIR......K....S.KKSFYAF.H.....ITP.....LQ.....--..--............K...T...Y.I.TE.S..I...ID............HTDLP--........................................VK.PKFIRKFVATK.M........L.ELGIP.........SE.VVDFFQGRTP....SSILSKHYL.DLL.TL.AKKEYKKYAEW............................................
R9N3M3_9FIRM/162-332                 .....................................................................................................................krfytdyeiesmrdacin--------------.-----..-KRE...L.AII.DLLIS...TGLRVSEVSN...I.LLSe......vdWD.K.............KTM...............IIhgkggK..D...R.......I.VP..F...........S....IR.....CKK......H....L.QE--YLF.E.....RGQnvssyLF.....CS..LKk..........pY...G...K.I.SK.D..T...IN............QIIKKIGtri.................................glpdIT.VHCFRRWLASD.L........N.KKGVD.........PT.IIQDILGHSS....FETTQKHYL.AK-.--.-----------sydkisy.....................................
A0A557SXN5_9ARCH/179-356             .......................................................................................................................riwladegfieamvhk--------------.-ALEI..DGDI...G.III.KFAFF...SGLRGEEITY...A.HETp.......iCD.Sltg.......cscSKLh.............iTQ.....K..K...N.......V.SI..I...........V....LN.....RIV......G....Q.KHSYFTI.V.....PTT.....LWk..mfKN..LS............K...V...T.K.EE.R..N...IS............HMMIKNHte....................................skAT.LMDLRKFHYNI.L........C.RSEMG.........EI.GAEVLAGRA-....KSISAKHYLiHEL.DK.ISDQYS-----rcmlk.......................................
D1GF58_9VIRU/176-331                 ......................................................................................................................................l-RVPTLEEVRKTLS.TVKEY..-PNL...Y.LFY.RLLLE...SGSRESEALK...V.LSE.........YN.S.............QNE...............MQ.....E..V...G.......F.SI..Y...........I....LN.....WTR......G....Q.KKSFYLF.H.....VTE.....LK.....--..--............Q...I...K.I.SK.A..Y...VD............KYVKKLN.......................................lTP.PKYIRKFTATK.M........L.ELGIP.........SE.VVDFIQGRTP....SEVLTKHYL.DLL.TL.AKKEYKKYAEW............................................
D2REV3_ARCPA/108-272                 ......................................................................................................................................a-IFISDDEIVEAWE.NHVIN.qPEDI...R.ILF.KLLIY...SGVRASHAVP...L.LNT.........FD.R.............AQLi.............eIE.....E..K...G.......I.AR..Y...........P....IL....eFSK......G....Q.KRGYFAY.M.....PLE.....FA....rEE..LR............R...V...K.I.SY.R..D...YT............ERARYKR........................................VS.ANTIRKWHYNF.M........I.ENDVP.........ES.VADFIQGRKP....ASVGAMHYL.AVA.RQ.ADRLYSQLVN-r...........................................
H2C891_9CREN/83-236                  .....................................................................................................................................lk--VPSVDQIRQWAE.KVKGT..--RV...E.LLF.RLLLE...SGVRFTEAIK...V.LSE.........YS.P.............END...............VC.....E..N...G.......I.CI..Y...........T....LN.....WSR......G....S.KRVFYVF.H.....VSP.....LQ.....--..--............R...Q...S.I.TY.N..Y...AK............KIMHELD........................................IA.PKYIRKFTATK.M........L.ELNIP.........GE.IVDFIEGRTP....GNILTKHYL.DLY.AL.AKKEYKKYAEW............................................
A3DM16_STAMF/3-120                   .................................................................................................................................nkrlvc--------------.-----..----...-.---.-----...----------...-.---.........--.-.............---...............FT.....D..K...G.......F.CR..Y...........Y....MG.....LRE......T....T.KHCEWRYfS.....SKT.....LSl...lEE..IA............P...R...K.I.SK.H..L...PR............RYAEKHG.......................................lLL.PKYVRKTAWRL.M........I.-KTMN.........ME.VARFIQSRFG...eLRVSEARYE.DLI.SL.ADQAYPIFL--kh..........................................
A0A133U2W1_9EURY/161-328             ....................................................................................................................................knp---PSPEAIRKLYE.AFDTL..--RD...E.TSL.LLFAT...TGLRRNELYH...L.TRD........eVD.L.............DKR...............MI.....-..-...-.......-.--..-...........T....PN.....KDS......R....T.KKTYVTF.Y.....NEE.....AE.....RH..LE............K...-...Y.L.DE.S..E...IQeei.....fpirA-----Rsanriyrk.......................yskeagvetIT.PQDLRVWFSEE.M........K.KLGVS.........GE.YIDAFCGRLP....RSVRARHYT.DYSeER.LKEVY------era.........................................
A0A133USZ8_9EURY/1-57                .....................................................................................................................................mp--------------.-----..----...-.---.-----...----------...-.---.........--.-.............---...............--.....-..-...-.......-.--..-...........-....--.....---......-....-.-------.-.....---.....--.....--..--............-...-...-.-.--.-..-...--............-------........................................--.PKILRKWFVSE.M........K.KLGVN.........SG.FIDAFCGRVP....RSIQDSHYT.DLSpER.LKEVYQK----anl.........................................
A0A0V8RW68_PYROC/96-274              ....................................................................................................................................pyp---ISLEDVRRTLE.LLGEN..HPVY...Y.TVY.RVMIE...SGARYTHVLR...M.IES.........WD.PggtveipgvgvttERL...............VCp...gD..K...G.......F.CR..Y...........Y....MG.....LRG......S....A.KQCEWIY.F.....SRE.....TL.....EL..LM............R...-...-.V.AP.R..R...VG............RHQPRRYavr..................................hglVL.PKYMRKVAWRL.M........-.VKTVG.........RE.AARFMQSRFG...eLRVSEARYE.DLL.GE.ADQAYPKYLE-h...........................................
A0A5J6SY74_9BACI/94-260              ....................................................................................................................................qer---LTDEQIHEFYT.YIDQL..KPNI...R.TAF.YLMIG...SGARVGEVAH...L.TKE.........-D.I.............TIE...............--.....K..E...G.......R.IF..V...........D....IQ....dAKW......G....SdRKIPIVF.E.....KSA.....LIvhdylQS..VD............T...S...S.L.PV.F..R...VS............KRTLQTHattfm.............................qktnipFS.CHVLRHTFATL.L........L.EKSVP.........IE.KIQYLLGHKT....PSA-TAHYT.---.--.-----------qsahinvld...................................
F9VP84_SULTO/1-89                    ......................................................................................................................................m--------------.-----..----...-.---.---LE...SGVGLKEALY...I.LNN.........YN.P.............SLD...............QK.....E..D...G.......F.YI..Y...........M....VN.....LVR......K....S.KKDMY--.-.....---.....--.....--..--............-...-...-.-.--.-..-...--............-------........................................--.-----------.-........-.-----.........--.----------....---------.---.--.-----------gnimfsievkgnirilysvdlkncivfiwgfgvsqgllrswlss
D1GF92_9VIRU/186-341                 ......................................................................................................................................l-RVPTLDEVRKTLQ.LAKEY..SENV...Y.FVY.RLALE...SGSRLSEILK...V.LKE.........--.P.............EKD...............VC.....D..N...D.......I.CY..Y...........P....LA.....WTR......G....Q.KSVFYVF.H.....LTP.....LR.....--..--............K...I...D.I.TQ.W..A...IS............DFERRNDe......................................aIP.IKYIRKFVATE.L........A.GLGIN.........FD.IIDFIQGRKP....SRVLTQHYV.SMF.AI.AKENYKKYAEW............................................
Q6UG89_SSV2/169-324                  ......................................................................................................................................l-RVPTLEEVRKTLS.TVKEY..-PNL...Y.LFY.RLLLE...SGSRESEALK...V.LND.........YN.P.............QNE...............IR.....E..E...G.......F.SI..Y...........I....LN.....WTR......G....Q.KKSFYIF.H.....VTE.....LK.....--..--............Q...I...K.I.SK.A..Y...VD............KYVRRLN.......................................lVP.PKYIRKFFATK.A........L.ELGIP.........SE.VVDFLEGRTP....GDILTKHYL.DLL.TL.AKKYYPLYAEW............................................
A0A1R1MMT3_9BACT/104-273             ....................................................................................................................................eal----SYEEVNKVFQ.AARKR..CYRD...Y.LMV.KTILF...CGLRISELLS...L.NK-.........--.-.............-KD...............IV.....T..A...K.......G.RK..V...........L....RV.....VGK......G....G.KERF-IP.L.....PED.....FS.....RE..LEt..........yI...N...S.L.DG.E..K...LFp.........ltYQGA--Kyifnri...........................aeetgvkLH.PHKLRHTFATI.L........V.DRGVD.........IR.IIQAFLGHAS....PNTTARY--.---.--.-----------akvrddvmfkvadkvfssv.........................
D1GF26_9VIRU/195-348                 ......................................................................................................................................l-RVPSEAEIKEWLT.KVKGT..--KV...E.LLF.KLLLE...SGIRLTEAVK...L.VNE.........YD.P.............KNE...............TI.....E..S...S.......Y.YI..Y...........T....MN.....WSR......G....S.KRVFYVF.H.....VTP.....LQ.....--..--............K...L...Q.I.TY.N..Y...AK............KLFHELK........................................ID.PKYVRKFVATK.C........L.ELNIP.........AE.VVDFLEGRTP....TQILTRHYL.DLL.TL.TKKYYPLYAEW............................................
A0A2Z5WQ62_9VIRU/180-333             ............................................................................................................................krvpsleaild-----------SIE.R----..AGPY...R.IVY.IILLE...SGLRLVEAVK...L.IRE.........YD.R.............LEC...............TR.....L..D...G.......Y.TR..C...........L....LG.....YTR......G....K.KRALWGY.H.....ITP.....VE.....-P..ME............D...-...-.L.TD.R..R...VT............SYAEKYR.......................................lTP.PKYIRKFVATK.M........A.ELGVP.........FE.VIDFIQGRTP....RSVLLQHYA.QLL.GV.ADREYAKYARW............................................
A0A133VHS7_9EURY/123-262             ......................................................................................................................................v-YIPDKSEIREVFE.NLDCL..--DV...K.TAY.LMWAT...SGLRRGELLN...L.TPD.........--.-.............NVD...............FD.....K..R...M.......L.V-..-...........-....PG.....KRN......S....T.KNTWVTF.C.....SDE.....AAe..ylDK..LE............R...L...P.G.KY.R..K...DH............YLRKLKKas...................................dgsVT.PQILRKWFAKE.M........R.NLNVS.........GD.HVDAFCGRLP....QSVR-----.---.--.-----------g...........................................
A0A510DTK2_9CREN/104-261             ......................................................................................................................................t-YVPSDAEVLKLRD.ALPS-..--DY...T.HVY.NVLVC...TGLRMTEVIY...L.LNN.........KD.K.............LRV...............VD.....L..G...D.......F.VR..V...........H....LD.....LMR......K....S.KNAMVCY.L.....PKH.....VF.....QS..LK............P...L...K.V.HE.D..T...VK............SAFCESG........................................LC.EKYLRKWFNQK.V........R.SAVKD.........RD.LAEFLEGRIS...gLSVGAVHYT.DLI.GL.SDKEYPHVFD-v...........................................
#=GC seq_cons                        ......................................................................................................................................h....s.pclhchhp..hcp.....ph...h.hla.hhhl....SGhRhsEhhp...l.hpp.........hs...............pp................hh.....p..p...t.......h.sh..Y................ls.....hpc......s....p.Kcsahha.h.....spp.....ht.....p...hp............p...h...p.l.sp.p..t...lp............chhpphp........................................ls.s+hlRKaassh.h........h.phuls.........t-.ll-alpGRts....psVhspHYh.sh..t..hpp.Y..................................................
//