#=GF ID   Phi-29_GP4
#=GF AC   PF05464.15
#=GF DE   Phi-29-like late genes activator (early protein GP4)
#=GF AU   Moxon SJ;0000-0003-4644-1816
#=GF SE   Pfam-B_16889 (release 8.0)
#=GF GA   27.00 27.00;
#=GF TC   47.30 92.30;
#=GF NC   25.60 19.20;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   10438592
#=GF RT   The switch from early to late transcription in phage GA-1:
#=GF RT   characterization of the regulatory protein p4G. 
#=GF RA   Horcajadas JA, Monsalve M, Rojo F, Salas M; 
#=GF RL   J Mol Biol 1999;290:917-928.
#=GF DR   INTERPRO; IPR008771;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This family consists of phi-29-like late genes activator (or
#=GF CC   early protein GP4). This protein is thought to be a positive
#=GF CC   regulator of late transcription and may function as a sigma like
#=GF CC   component of the host RNA polymerase [1].
#=GF SQ   10
#=GS B7SSM4_BPNF/1-125       AC B7SSM4.1
#=GS A0A1W6JSB0_9CAUD/1-126  AC A0A1W6JSB0.1
#=GS A0A7T7ZAJ3_9CAUD/1-113  AC A0A7T7ZAJ3.1
#=GS Q9T1J9_BPGA1/1-128      AC Q9T1J9.1
#=GS A0A514AAQ3_9CAUD/1-128  AC A0A514AAQ3.1
#=GS A0A1X9SGP7_9CAUD/1-126  AC A0A1X9SGP7.1
#=GS A0A142IG84_9CAUD/1-125  AC A0A142IG84.1
#=GS TF4_BPPH2/1-125         AC P03682.1
#=GS A0A5Q2W7M6_9CAUD/1-113  AC A0A5Q2W7M6.1
#=GS A0A0N9SGQ0_9CAUD/1-125  AC A0A0N9SGQ0.1
B7SSM4_BPNF/1-125                  .MPRTARGIYHNLKESEYVVS..NGD..ATFFFSSEMYLNKFLDGYQKHREEFNKKINR.I.T.D.T.PLNMDMLADITFYSNVEKRGFHAWLKGCNTTWQEIHVYALRTMTKPCTQNWSRIRKPKLVERRKSMV....
A0A1W6JSB0_9CAUD/1-126             .MPVTIRGVYHNLKESEYTAS..NGE..VVFFFSSKLYRDKFLNKYKEQRTITSKRMNK.I.T.K.AdEYNTDMLSDFLLYRDIETRGFYAWVKGVTIEWQSMYLYALARMTEKNTQDWFEMQKPKLEERKRIM-e...
A0A7T7ZAJ3_9CAUD/1-113             .MAATRDGVYHNLKESEYTAS..CEG..VVFFFSRKLYQAKFLEKYEENRKKFYKSLKR.F.AdE.T.MYNFDMFIDLHFYKEVEKNGFYVEFKGGEMSCLEIETMILRNLTKTNTNVWSK--------------t...
Q9T1J9_BPGA1/1-128                 .MVVTQGGIYHNLKESRYVITceNGL..VTYFFSSKMYMHKFLNTYKENREKNNIKMSK.L.L.KdF.TSDIDLLSDICYYKQVEKRGFLVLYKGDEMTWQESQTLGLQRRNEKKSLNYQEVSRLKLRDYL----rimd
A0A514AAQ3_9CAUD/1-128             m-VVTTGGVYHNLKESRYVVT..CQDgmITYFFSSKLYMRKFLENYENNRNTKNARIHK.MlP.F.E.GLGMDFLLDVCYYKEVEKRGFRVLYKGECLEWQEITSTNLHLMRRRYIPNYREVLRTKLREWKKI--tv..
A0A1X9SGP7_9CAUD/1-126             .MPVTIRGIYHNLKESEYTAS..NGE..VVFFFSSKLYRDKFLNKYKEQRTITSKRMNK.I.T.K.AdEYNTDMLSDFLLYRDIETRGFYAWVKGVTIEWQSMYLYALARMTEKNTQDWFEMQKPKLEERKRIM-e...
A0A142IG84_9CAUD/1-125             .MPRTARGIYHNLKESEYVVS..NGD..ATFFFSSEMYLNKFLDGYQKHREEFNKKINR.I.T.D.T.PLNMDMLADITFYSNVEKRGFHAWLKGCNTTWQEIHVYALRTMTKPCTQNWSRIRRPKLVERRKSMV....
TF4_BPPH2/1-125                    .MPKTQRGIYHNLKESEYVAS..NTD..VTFFFSSELYLNKFLDGYQEYRKKFNKKIER.V.A.V.T.PWNMDMLADITFYSEVEKRGFHAWLKGDNATWREVHVYALRIMTKPNTLDWSRIQKPRLRERRKSMV....
A0A5Q2W7M6_9CAUD/1-113             .MPATRDGVYHNLKESEYTAS..CEG..VVFFFSRKLYQQKFLSKYEENRQKFYKSLKR.F.AdE.T.MYNFDMFIDLHFYKEIEKNGFYVEFKGGEVTCLEMETMILRNLTKTNSNVWS---------------gt..
A0A0N9SGQ0_9CAUD/1-125             m--KTKRGVYHNIKESEYTVS..NGD..TVFFFTSDFYRQKFLTGYKEHRKTFKHRMSKtI.D.D.E.VFNFTFLSDMYYYREVEQRGFYTWIKGVEFDWQGLHLYALARLTEKNINDWREILKPKLGERKKFM-e...
#=GC seq_cons                      .MPsTpRGlYHNLKESEYssS..NG-..VsFFFSSKLYhsKFLssYcEpRccFsK+ls+.l.s.c.s.saNhDMLuDlpaY+-VEKRGFasWlKGsshoWQElalYAL+pMT+pNTpsWpclp+PKLtER++.M.p...
//