GenomeNet

Database: Pfam
Entry: PlyCA_N
LinkDB: PlyCA_N
Original site: PlyCA_N 
#=GF ID   PlyCA_N
#=GF AC   PF21480.1
#=GF DE   PlyCA, N-terminal domain
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF AU   Lazaro Pinto Beatriz;0000-0001-6837-2941
#=GF SE   ECOD:EF19507
#=GF GA   27.00 27.00;
#=GF TC   27.20 27.00;
#=GF NC   24.20 18.90;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -E 1000 -Z 75585367 HMM pfamseq
#=GF TP   Domain
#=GF CL   CL0037
#=GF RC   Paper describing PDB structure 4f88
#=GF RN   [1]
#=GF RM   22807482
#=GF RT   X-ray crystal structure of the streptococcal specific phage
#=GF RT   lysin PlyC.
#=GF RA   McGowan S, Buckle AM, Mitchell MS, Hoopes JT, Gallagher DT,
#=GF RA   Heselpoth RD, Shen Y, Reboul CF, Law RH, Fischetti VA, Whisstock
#=GF RA   JC, Nelson DC;
#=GF RL   Proc Natl Acad Sci U S A. 2012;109:12752-12757.
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This domain is found at the N-terminal end of PlyCA from
#=GF CC   Streptococcus virus C1, the catalytic subunit of the potent
#=GF CC   lysin PlyC that is specific for streptococcal species. PlyCA
#=GF CC   contains three distinct domains. This domain, which folds into a
#=GF CC   loose bundle of alpha- helices, is considered as a putative
#=GF CC   glycosyl hydrolase (GyH) domain, as it has similarity to class
#=GF CC   IV family 19 chitinases [1].
#=GF SQ   7
#=GS A0A4D6DRV9_9CAUD/7-193    AC A0A4D6DRV9.1
#=GS A0A7L7SSJ9_9CAUD/7-193    AC A0A7L7SSJ9.1
#=GS A0A4D6DT48_9CAUD/7-193    AC A0A4D6DT48.1
#=GS A0A387BCS7_9LACT/123-283  AC A0A387BCS7.1
#=GS A0A4R1R623_9FIRM/224-394  AC A0A4R1R623.1
#=GS A0A024B3A4_9CAUD/7-193    AC A0A024B3A4.1
#=GS A0A1M4NDN0_9CAUD/7-193    AC A0A1M4NDN0.1
A0A4D6DRV9_9CAUD/7-193               .....YTTEQYQAFLSQPFGYDFGVSDETIAQWFMIQPGARPVINSYGVTKANLLSDYIPKLKQEFGGSLVFLMTTVSEGGGAGNWVNHYMSDT.SDTGMGCLIDDIE.YVKTTFDRHFPPAMS.......APEVGGAYTEDSQGL.TMQVYNAVPDGSIGSYFIPSTMAGNAWIFGSQWCLANQGAAPPAVYFGNPYDQL-i.............
A0A7L7SSJ9_9CAUD/7-193               .....YTTEQYQAFLSQPFGYDFGVSDETIAQWFMIQPGAKPVINSYGVTKSNLLSDYIPKLKQEFGGSLVFLMTTVSEGGGAGNWVNHYMSDT.SNTGMGCMIDDIA.YVKTTFDRHFPPAIS.......APEVGGAYTEDEEGL.TMKVYNAVPDGSIGSYFIPSTMAGNAWIFGSQWCLANQGAAPPAVYFGNPYDQL-i.............
A0A4D6DT48_9CAUD/7-193               .....YTTEQYQAFLSQPFGYDFGVSDETIAQWFMIQPGARPVINSYGVTKANLLSDYIPKLKQEFGGSLVFLMTTVSEGGGAGNWINHYQNDT.GNTGMECLIADIE.YTKTTFDRHFPPAMN.......APEVGGTYVEDIEGL.TMQVYNAVPDGSIGSYFIPSTMAGNAWIFGSQWCLANQGAAAPAVYFGNPYDQL-i.............
A0A387BCS7_9LACT/123-283             .....FTLAQVTQFGNDGLTSTWGVSEQNVENYFLANN--RATAAKYNLIASNIGE-VSDAVKSEGVSPTFFWLYVVNEGGGAGGFINHYGSDS.G-NAVTDAKRDAD.Y----LVQYASLNTK.......VATVG-GEPADMPTDeATSFLKAQPNGSIGRVYVQATSAVTA-----------------------------eietlsgktgd...
A0A4R1R623_9FIRM/224-394             dvlsl---------MNASIDSTWCISDSTAEAWFLSTN--TVVIKKYDLNSTNIG-EVTAAIKATGVSPVFFYAYVVNEGGGAGGFINHYGKNYyANNGGDTAVNAASgDAKYLASQSAKMNSSpawidagNPVDFVPLSVKDSGN.--ASFASMPSGSIGRAYIPATAAAT------------------------------wevyypegllksyn
A0A024B3A4_9CAUD/7-193               .....YTMEQYQTFLSQEFNSTFGLSDDQIVNWFMSQAGSQGVIQSYGVNADYIRNRIFPALDERNLGHFMFLAITAMEGGGAGNWINHYMYDT.SSDGFQCALDDMA.YIKTLLTTGATLNVS.......APECIQPWVEDNPGQ.AQTFYAKIAQTSIGAYYMAATFAGNAWVWATNWCEENQGPRPPAIYFGNPYDDIM..............
A0A1M4NDN0_9CAUD/7-193               .....YTTEQYQAFLSQPFGYDFGVSDETIAQWFMIQPGARPVINSYGVTKTNLLSDYIPKLKQEFGGSLVFLMTTVSEGGGAGNWVNHYMSDT.SNTGMGCMIDDIA.YIKTTFDRHFPPAIS.......APEVGGAYTEDEEGL.TMKVYNAVPDGSIGSYFIPSTMAGNAWIFGSQWCLANQGAAPPAVYFGNPYDQL-i.............
#=GC seq_cons                        .....YThEQYQsFLSQsFs.sFGVSD-TIspWFMhQsGu+sVIsSYGVspsNlhs-hhPtLKpEhsGslhFLhhTVsEGGGAGNWlNHYhsDT.ussGhsChlcDhs.YhKThhspahs.shS.......APEVGssasEDppG..shpsYsAlPsGSIGuYaIPuThAGNAWlauopWC.tNQGstsPAlYFGNPYDpl.h.............
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