#=GF ID   Pneumo_M2
#=GF AC   PF07380.15
#=GF DE   Pneumovirus M2 protein
#=GF AU   Moxon SJ;0000-0003-4644-1816
#=GF SE   Pfam-B_20478 (release 10.0)
#=GF GA   25.00 25.00;
#=GF TC   52.70 52.50;
#=GF NC   23.30 22.70;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -E 1000 --cpu 4 -Z 75585367 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   12692207
#=GF RT   Identification of amino acids that are critical to the
#=GF RT   processivity function of respiratory syncytial virus M2-1
#=GF RT   protein. 
#=GF RA   Zhou H, Cheng X, Jin H; 
#=GF RL   J Virol 2003;77:5046-5053.
#=GF DR   INTERPRO; IPR009969;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This family consists of several Pneumovirus M2 proteins. The
#=GF CC   M2-1 protein of respiratory syncytial virus (RSV) is a
#=GF CC   transcription processivity factor that is essential for virus
#=GF CC   replication [1].
#=GF SQ   3
#=GS M22_HRSVA/1-89  AC P88812.1
#=GS M22_BRSVA/1-89  AC Q77KZ6.2
#=GS M22_HRSVB/1-89  AC O42047.1
M22_HRSVA/1-89             MTMPKIMILPDKYPCSITSILITSRCRVTMYNQKNTLYFNQNNPNNHMYSPNQTFNEIHWTSQELIDTIQNFLQHLGIIEDIYTIYILV
M22_BRSVA/1-89             MNNSNIIIFPEKYPCSISSLLIKDENDVFVLSHQNVLDCLQFQYPYNMYSQNHMLDDIYWTSQELIEDVLKILHLSGISINKYVIYVLV
M22_HRSVB/1-89             MTKPKIMILPDKYPCSISSILISSESMIATFNHKNILQFNHNHLDNHQRLLNNIFDEIHWTPKNLLDATQQFLQHLNIPEDIYTIYILV
#=GC seq_cons              MTpPKIMILPDKYPCSISSILIoSEscVssaNHKNlLpFNQNphsNHMYS.NphFDEIHWTSQELIDslQpFLQHLGIsEDIYTIYILV
//