#=GF ID   Pneumo_matrix
#=GF AC   PF03393.20
#=GF DE   Pneumovirus matrix protein
#=GF AU   Mifsud W;0000-0002-9805-6461
#=GF SE   Pfam-B_3641 (release 6.6)
#=GF GA   27.00 27.00;
#=GF TC   265.50 265.40;
#=GF NC   21.70 19.40;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -Z 75585367 -E 1000 HMM pfamseq
#=GF TP   Family
#=GF DR   INTERPRO; IPR005056;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF SQ   8
#=GS MATRX_HRSVB/1-252       AC O42049.1
#=GS MATRX_MPV15/1-251       AC Q5MKM5.1
#=GS MATRX_HRSVA/1-252       AC P0DOE7.1
#=GS Q5MKN7_9MONO/1-251      AC Q5MKN7.1
#=GS A0A077SJW0_9MONO/1-252  AC A0A077SJW0.1
#=GS MTRX_AMPV1/1-252        AC Q2Y2M4.1
#=GS MATRX_BRSVA/1-252       AC P24615.1
#=GS MATRX_HMPVC/1-252       AC Q6WB99.1
MATRX_HRSVB/1-252                  METYVNKLHEGSTYTAAVQYNVLEKDDDPASLTIWVPMFQSSVPADLLIKELASINILVKQISTPKGPSLRVTINSRSAVLAQMPSNFIISANVSLDERSKLAYDVTTPCEIKACSLTCLKVKSMLTTVKDLTMKTFNPTHEIIALCEFENIMTSKRVIIPTYLRPISVKNKDLNSLENIATTEFKNAITNAKIIPYAGLVLVITVTDNKGAFKYIKPQSQFIVDLGAYLEKESIYYVTTNWKHTATRFSIK
MATRX_MPV15/1-251                  MEAYLVEMYHGVPYTAAVQLNLVEKHSANISLTVWIPMFQTSLPKNSVMDLLHDVTVICTQISTVHGPMIKVDLSSSNAGLATMPRQFLINAIIALDDWGNMDYEVPVAFDKKSFCVTILKPKNMLYTVPSIT-PTNRPTHELIAVCSFHNRVTLKSFNIPVFIRALYIRQQGLDSVEQAISSDVDHAITTARVAPYAGLTLVINITSTKGAFKLLKAGSQILAELGPYLTQVSLHDVIMNWKHTGTSYILK
MATRX_HRSVA/1-252                  METYVNKLHEGSTYTAAVQYNVLEKDDDPASLTIWVPMFQSSMPADLLIKELANVNILVKQISTPKGPSLRVMINSRSAVLAQMPSKFTICANVSLDERSKLAYDVTTPCEIKACSLTCLKSKNMLTTVKDLTMKTLNPTHDIIALCEFENIVTSKKVIIPTYLRSISVRNKDLNTLENITTTEFKNAITNAKIIPYSGLLLVITVTDNKGAFKYIKPQSQFIVDLGAYLEKESIYYVTTNWKHTATRFAIK
Q5MKN7_9MONO/1-251                 MEAYLVEMYHGVPYTAAVQLNLVEKHSANISLTVWIPMFQTSLPKNSVMDLLHDVTVICTQISTVHGPMIKVDLSSSNAGLATMPRQFLINAIIALDDWGNMDYEVPVAFDKKSFCVTILKPKNMLYTVPSIT-PTNRPTHELIAVCSFHNRVTLKSFNIPVFIRALSIRQQDLDSVEQAISSDVDHAITTARVAPYAGLTLVINITSTKGAFKLLKAGSQILAELGPYLTQVSLHDVIMNWKHTGTSYILK
A0A077SJW0_9MONO/1-252             MESYIIDTYQGVPYTAAVQVDLIEKDSNPAKLTVWFPLFQSSTPAPVLLDQLKTLSITTQYTASPEGPVLQVNASAQGAAMSALPKKFTVSAAVALDEYSRLEFGVLTVCDIRSLYLTTLKPYGMVAKIITDVKSVGRKTHDLIALCDFIDMEKGVPITIPAYIKAVSIKESESATVEAAISSEADQAITQARIAPYAGLILIMTMNNPKGIFKKLSAGVQVIVELGPYVQAESLGKICKTWNHQRTRYILK
MTRX_AMPV1/1-252                   MESYLVDTYQGVPYTAAVQTDLVEKDQLPARLTVWFPLFQTNTPPTVLLEQLKTLTITTLYTASQNGPILKVNASAQGAAMSALPKSFDVSASVALDDYSKLEFDKLTVCELKAVYLTTMKPYGMVSKFVNSAKAVGKKTHDLIALCDFLDLEKGVPVTIPAYIKSVSIKESESATVEAAIGGEADQAITQARIAPYAGLIMIMTMNNPKGIFKKLGAGVQVIVELGAYVQAESISRICRNWSHQGTRYVLK
MATRX_BRSVA/1-252                  METYVNKLHEGSIYTAAVQYNVIEKDDDPASLTIWVPMFQSSISADMLIKELINVNILVRQISTPKGPSLKIMINSRSAVLAQMPSKFTISANVSLDERSKLAYDITTPCEIKACSLTCLKVKNMLTTVKDLTMKTFNPTHEIIALCEFENIMTSKRVVIPTFLRSINVKAKDLDSLENIATTEFKNAITNAKIIPYAGLVLVITVTDNKGAFKYIKPQSQFIVDLGAYLEKESIYYVTTNWKHTATKFSIK
MATRX_HMPVC/1-252                  MESYLVDTYQGIPYTAAVQVDLVEKDLLPASLTIWFPLFQANTPPAVLLDQLKTLTITTLYAASQSGPILKVNASAQGAAMSVLPKKFEVNATVALDEYSKLEFDKLTVCEVKTVYLTTMKPYGMVSKFVSSAKPVGKKTHDLIALCDFMDLEKNTPVTIPAFIKSVSIKESESATVEAAISSEADQALTQAKIAPYAGLIMIMTMNNPKGIFKKLGAGTQVIVELGAYVQAESISKICKTWSHQGTRYVLK
#=GC seq_cons                      MEoYll-hYcGlPYTAAVQhNLlEKDssPASLTlWlPMFQoShPsslLl-pL+sloIlspQISTs+GPhLKVslSSpuAuLAsMP+pFpIsAsVALDEaSKL-YDVsTsCElKussLTsLKPKsMLoTVhslThsTs+PTH-LIALC-FcNlhTuKsVsIPsaIRulSIKpp-LsoVEsAIooEsDpAITsA+IAPYAGLlLVITlTssKGAFKhLKAGSQlIVELGAYLppESIacVspNWKHTuTRYlLK
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