#=GF ID   Polyhedrin
#=GF AC   PF00738.22
#=GF DE   Polyhedrin
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF SE   Pfam-B_423 (release 2.1)
#=GF GA   25.00 25.00;
#=GF TC   413.70 413.50;
#=GF NC   22.80 22.20;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Polyhedrin
#=GF CL   CL0055
#=GF DR   INTERPRO; IPR001746;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   These proteins are found in occlusion bodies in various viruses.
#=GF CC   The polyhedrin protein protects the virus.
#=GF SQ   17
#=GS Q4LEM9_NPVMB/13-244      AC Q4LEM9.1
#=GS Q9WNA5_9ABAC/13-244      AC Q9WNA5.2
#=GS Q6JKF9_9CBAC/13-244      AC Q6JKF9.1
#=GS Q7TLY0_NPVCF/12-242      AC Q7TLY0.1
#=GS Q1A4U5_GVCF/15-246       AC Q1A4U5.1
#=GS Q462G6_9ABAC/13-244      AC Q462G6.1
#=GS Q6JPH0_NPVNC/14-245      AC Q6JPH0.1
#=GS GRAN_GVCPM/15-246        AC P87577.1
#=GS Q0ILB8_NPVLS/13-244      AC Q0ILB8.1
#=GS Q773I9_NPVR1/12-243      AC Q773I9.1
#=GS PYHD_NPVAC/12-243        AC P04871.1
#=GS Q8B5N3_9BBAC/15-246      AC Q8B5N3.1
#=GS A0A2H4UZL9_9ABAC/13-244  AC A0A2H4UZL9.1
#=GS A0A0E3Z876_9ABAC/13-244  AC A0A0E3Z876.1
#=GS Q2V6Q2_9BBAC/15-247      AC Q2V6Q2.2
#=GS A0A0M3WP38_9ABAC/13-244  AC A0A0M3WP38.1
#=GS A0A346TPT9_9ABAC/13-244  AC A0A346TPT9.1
Q4LEM9_NPVMB/13-244                 RTYVYDNKYYKNLGSVIKNANRKKHYIEH.ELEEKTLDPLDRYLVAEDPFLGPGKNQKLTLFKEIRNVKPDTMKLVVNWSGKEFLRETWTRFMEDSFPIVNDQEVMDVFLVINMRPTRPNRCFKFLAQHALRCDPDYVPHEVIRIVEPSYVGSNNEYRVSLAKRGGGCPVMNLHSEYTN.SFEEFINRVIWENFYKPIVYVGTDSAEEEEILLEVSLVFKIKEFAPDAPLYNGP
Q9WNA5_9ABAC/13-244                 KTYVYDNKYFKNLGAVIKNAKRKKHLEEH.EHEERNLDSLDKYLVAEDPFLGPGKNQKLTLFKEIRSVKPDTMKLVVNWSGREFLRETWTRFMEDSFPIVNDQEIMDVFLSVNMRPTKPNRCYRFLAQHALRCDPDYIPHEVIRIVEPSYVGSNNEYRISLAKKYGGCPVMNLHAEYTN.SFEDFITNVIWENFYKPIVYVGTDSAEEEEILLEVSLIFKIKEFAPDAPLYTGP
Q6JKF9_9CBAC/13-244                 KSYIYDNKYYKGLGDIINSAKKRKHDQDW.EKHADERRALNGFILPLDPRTGPGKHVKMVMFQEVRNIKANTMKLAINWSSKEYLREVWTTFIEDTFPINNYQEFTDVFLEIRCTPNKSNRHYRFLAQHGLRMDNDFVPCDTIRVIEPLYL-EGNTVSVSLLKRDGGCPVMKVRQEFNElSLDEFIDRILWCHFHRPIVYIGTDSGEEEEVFIEASLTFIIKEFAPEAPFVNGP
Q7TLY0_NPVCF/12-242                 RTYVYDNKYYKNLGSVIKR-KRKKHLLEH.EEDEKHLDPLDHYMVAEDPFLGPGKNQKLTLFKEIRNVKPDTMKLIVNWSGKEFLRETWTRFVEDSFPIVNDQEVMDVFLVVNMRPTRPNRCYKFLRQHALRWDCDYVPHEVIRIVEPSYVGMNNEYRISLAKKGGGCPIMNIHAEYTN.SFESFVNRVIWENFYKPIVYIGTDSGEEEEMLIEVSLVFKVKEFAPDAPLFTGP
Q1A4U5_GVCF/15-246                  TSCVIDNHHLKSLGSVLNDVRHKKDRIRE.AEYEPILDIANQYMVTEDPFRGPGKNVRITLFKEIRRVQPDTMKLVCNWSGKEFLRETWTRFISEEFPITTDQEIMDLWFEIQLRPMQPNRCYKFTMQYALGANPEYVAHDVIRQQDPYYVGPNNMERINLSKKGFAFPLTCLQSVYND.NFERFFDDILWPYFHRPLVYVGTTSAEIEEIMIEVSLLFKIKEFAPDVPLFTGP
Q462G6_9ABAC/13-244                 RTYVYDNKYYKNLGAVIKNAKRKKHYAEH.ELEEATLDPLDNYLVAEDPFLGPGKNQKLTLFKEIRNVKPDTMKLVVNWSGKEFLRETWTRFMEDSFPIVNDQEIMDVFLVVNMRPTRPNRCFKFLAQHALRCDPDYVPHEVIRIVEPSWVGSNNEYRISLAKKGGGCPIMNLHSEYTN.SFEEFINRVIWENFYKPIVYVGTDSAEEEEILLEVSLVFKIKEFAPDAPLYSGP
Q6JPH0_NPVNC/14-245                 KSYIYDNKYYRGLGDIINSAKKRKHDQDW.EKHAEERRALNGFILPLDPRTGPGKHVKMVMFQEVRNIKANTMKLAINWSGREYLREVWTTFIEDTFPINNYQEFTDVFLEIRCTPNKSNRHYRFLAQHGLRMDEDFVPCDTIRVIEPEYL-QGNTVSLSLLKRDGGCPMMKIRQQFNElDLEQFVDRILWCHFHRPIVYIGTDSGEEEEVFIEASLTFIIKEFAPEAPFVNGP
GRAN_GVCPM/15-246                   TSCVIDNHHLKSLGAVLNDVRRKKDRIRE.AEYEPIIDIADQYMVTEDPFRGPGKNVRITLFKEIRRVHPDTMKLVCNWSGKEFLRETWTRFISEEFPITTDQEIMDLWFELQLRPMHPNRCYKFTMQYALGAHPDYVAHDVIRQQDPYYVGPNNIERINLSKKGFAFPLTCLQSVYND.NFERFFDDVLWPYFYRPLVYVGTTSAEIEEIMIEVSLLFKIKEFAPDVPLFTGP
Q0ILB8_NPVLS/13-244                 RTYVYDNKYYKNLGHVIKNAKRKHDLIER.EADERELDHLDKYLVAEDPFMGPGKNQKLTLFKEIRNVKPDTMKLIVNWNGREFLRETWTRFMEDSFPIVNDQEVMDVFLVVNMRPTRPNRCFRFLAQHALRCDPDYVPHDVIRIVEPSYVGTNNEYRISLAKKGGGCPVMNLHAEYTT.SFESFIDKVIWYNFYKPIVYVGTDSAEEEEILLEVSLVFKIKEFAPDAPLYTGP
Q773I9_NPVR1/12-243                 RTYVYDNKYYKNLGSVIKNAKRKKHLIEH.EEEEKHLDPLDNYMVAEDPFLGPGKNQKLTLFKEIRNVKPDTMKLIVNWSGKEFMRETWTRFVEDSFPIVNDQEVMDVFLVVNLRPTRPNRCYKFLAQHALRWDEDYVPHEVIRIVEPSYVGMNNEYRISLAKKGGGCPIMNIHSEYTN.SFESFVSRVIWENFYKPIVYIGTDSGEEEEILIEVSLVFKVKEFAPDAPLFTGP
PYHD_NPVAC/12-243                   RTYVYDNKYYKNLGAVIKNAKRKKHFAEH.EIEEATLDPLDNYLVAEDPFLGPGKNQKLTLFKEIRNVKPDTMKLVVGWKGKEFYRETWTRFMEDSFPIVNDQEVMDVFLVVNMRPTRPNRCYKFLAQHALRCDPDYVPHDVIRIVEPSWVGSNNEYRISLAKKGGGCPIMNLHSEYTN.SFEQFIDRVIWENFYKPIVYIGTDSAEEEEILLEVSLVFKVKEFAPDAPLFTGP
Q8B5N3_9BBAC/15-246                 TTCVIDNHHLKSLGSVLNDVRRKKDHIRD.EEFGPIKDIANQYMVTEDPFRGPGKNVRITLFKEIRRVHPDTMKLVCNWSGKEFLRETWTRFICEEFPITTDQEIMDLWFELQLRPMQPNRCYKFTMQYALCAHSDYVAHDVIRQQDPYYVGPNNIERINLTKKGFAFPLTCLQSVYNE.NFEEFFDDVLWPYFHRPLVYVGTTSAETEEIMIEVSLLFKIKEFAPDVPLFTGP
A0A2H4UZL9_9ABAC/13-244             RTYVYDNKYFKNLGAVIKNAKRKKQMTEN.EIETRSYDPLDKYLIAEDPFMGPGKNQKLTLFKELRTIKPDTMKLIVNWSGKEFLRETWTRFAEDSFPIANDQEIMDVYLTVNMRPTKPNRCYKFLAQHALRSDPDYVPHEVIRIVEPSWVGSDNEYRISLAKKGGGCPLLNLHQEYTN.SFEEFIEKVIWDNFYKPLVYVGTDSAEEEEILLEVSLVFKIKEFAPDCPLFTGP
A0A0E3Z876_9ABAC/13-244             RTYVYDNKYYKNLGAVIKNAKRKKNQIDH.EVEEHALDPLDKYLVAEDPFLGPGKNQKLTLFKEIRNVKPDTMKLVVNWSGKEFLRETWTRFMEDSFPIVNDQEIMDVFLTITMRPTKPNRCYRFLAQHALRCDPDYVPHEVIRIVEPSYVGNNNEYRISLAKKGGGCPVMNLHAEYTN.SFEEFINRVIWENFYKPIVYIGTDSAEEEEILMEVSLVFKIKEFAPDAPLYSGP
Q2V6Q2_9BBAC/15-247                 TTCVIDNKHLKSLGSILGDVRRKKDLIREaAEFDPVKDIANQYMVTEDPFRGPGKNVKITLFKEIRRIHPDTMKLVCNWSGKEFLRETWTRFISEEFPITTDQEIMDLWFELTLRPMQPNRCYRFTMQYALAANPDYCAHDVIRQQDPYYVGPDNRERINLSKKGEAFPLTCLQSIYNE.NFEEFFDSVLWPYFHRPLVYVGTTSAEIEEVMIEVALLFKIKEFAPDVPLFTGP
A0A0M3WP38_9ABAC/13-244             RTYVYDNKYYKNLGHVIKNAKRRKHLAEH.EIEESALDPLDKYLVAEDPFLGPGKNQKLTLFKEIRNVKPDTMKLVVNWSGKEFLRETWTRFMEDSFPIVNDQEIMDVFLVVNMRPTKPNRCFRFLAQHALRCDPEYVPHEVIRIVEPSYVGSNNEYRISLAKKGGGCPVMNLHAEYTN.SFEEFINRVIWENFYKPIVYVGTDSAEEEEILLEVSLVFKIKEFAPDAPLYTGP
A0A346TPT9_9ABAC/13-244             RTYVYDNKFYKNLGSVIKNAKRKEHLLQH.EIEERTLDPLERYVVAEDPFLGPGKNQKLTLFKEIRIVKPDTMKLVVNWSGKEFLRETWTRFMEDSFPIVNDQEIMDVFLVIQMRPTRPNRCYRFLAQHALRCDPDYVPHEVIRIVEPVYVGANNEYRISLAKKGGGCPVMNLHSEYTN.SFEEFINRVIWENFYKPIVYVGTDSGEEEEILLELSLVFKIKEFAPDAPLYNGP
#=GC seq_cons                       +TYVYDNKYYKNLGuVIKsAKRKKchh-a.Eh-EppLDsLDpYlVAEDPFhGPGKNQKLTLFKEIRsVKPDTMKLVVNWSGKEFLRETWTRFhEDSFPIsNDQElMDVFLslshRPT+PNRCY+FLAQHALRsDPDYVPH-VIRIVEPsYVGsNNEYRISLAKKGGGCPlMNLHuEYTs.SFEcFls+VIWpNFYKPIVYVGTDSAEEEEILlEVSLlFKIKEFAPDAPLaTGP
//