#=GF ID   Poty_coat
#=GF AC   PF00767.22
#=GF DE   Potyvirus coat protein
#=GF AU   Finn RD;0000-0001-8626-2148
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF SE   Pfam-B_868 (release 2.1)
#=GF GA   27.00 27.00;
#=GF TC   42.00 40.80;
#=GF NC   22.50 19.30;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -Z 75585367 -E 1000 HMM pfamseq
#=GF TP   Family
#=GF DR   INTERPRO; IPR001592;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF SQ   12
#=GS K4PBT6_9POTY/2828-3065      AC K4PBT6.1
#=GS POLG_PVYN/2828-3061         AC P18247.2
#=GS POLG_SPMMV/3211-3454        AC P89201.1
#=GS POL1_BAYMY/2193-2403        AC Q9YJW3.1
#=GS POLG_RGMVD/2853-3084        AC O11436.1
#=GS POLG_SBMVN/2831-3063        AC P21231.2
#=GS POLG_BVY3/3266-3488         AC A0AUJ5.1
#=GS POLG_BSTV1/2848-3091        AC Q65730.1
#=GS POLG_TUMVJ/2929-3162        AC P89509.2
#=GS A0A1W6GVB0_9POTY/2245-2439  AC A0A1W6GVB0.1
#=GS A0A1L3KNT4_9VIRU/2365-2594  AC A0A1L3KNT4.1
#=GS POLG_TRMVU/2868-3108        AC A4KZ49.3
K4PBT6_9POTY/2828-3065                 ......................gdipeghtg--------.PAFTLPPPPT-RVVWVPPMLQRRVNAQAITRLMNYKPDV..N.LMRADVASQQTLDTWLQGLTRDLQLSN.DQ-VDAIIQSFMVWCINSGTSHASMSQELW----QAD.........DGTG.NTV.EYPLRPFIENA..G.TSLRSVMRNFSDIAEA-WIRERNR.RGTWIGAWASRAGLTDKRYAHVGFDFWISKPTTTHDELHYHTLMTQAHLRGLPIQNLAMANLVRQDGATPDYHVGDDIRPGMHNAGGG-r.........................
POLG_PVYN/2828-3061                    ...............................KDVNAGTS.GTHTVPRIKAITSKMRMPTSKGATVPN-LEHLLEYAPQQ..I.DISNTRATQSQFDTWYEAVRMAYDIGE.TE-MPTVMNGLMVWCIENGTSPNVN--GVW-----VM.........MDGN.EQV.EYPLKPIVENA..K.PTLRQIMAHFSDVAEA-YIEMRNK.KEPYMPRYGLIRNLRDMGLARYAFDFYEVTSRTPVRAREAHIQMKAAALKSAQPRLFGLDGGISTQEENTERHTTEDVSPSMHTLLGVK..........................
POLG_SPMMV/3211-3454                   ..............................p-DVTPAQI.VTFEPPRVTGFGALWIPRQQRNYMTPSYIEKIKAYVPHS..N.LIESGLASEAQLTSWFENTCRDYQVSM.DVFMSTILPAWIVNCIINGTSQERTNEHTWRAVIMAN.........MEDQ.EVL.YYPIKPIIINA..Q.PTLRQVMRHFGEQAVAQYMNSLQV.GKPFTVKGAVTAGYANVQDAWLGIDFLRDTMKLTTKQMEVKHQIIAANVTRRKIRVFALAAPGDGDELDTERHVVDDVARGRHSLRGAQ..........................
POL1_BAYMY/2193-2403                   ssaadgnwsvpatkqvnagltlkiplnklks--------.-----------------------------------VPKS.vM.EHNNSVALESELKAWTDAVRTSLGITTdEAWIDALIP-FIGWCCNNGTSDKHAENQ----VMQID.........SGKG.AVT.EMSLSPFIVHArmN.GGLRRIMRNYSDETVLL-----IT.NNKLVAHWSMKHGAS--ANAKYAFDFFVPRSWMNPQDIEVSKQARLAALG---------------------------------------tgtyntmltsdttnlrkttnhrvlds
POLG_RGMVD/2853-3084                   ...............................EDVPAASE.--FALPRLPTLGAKIRVPKFKGAIVLN-KDHLIKYTPDQ..R.DLSNTRATQEQFEKWYSGVRNEVEKTD.EE-MALLLNGSMVWCMENGTSPDLS--GSW-----TM.........MEGE.EQI.AYPLEPFCRHA..Q.PTLRSIMAHFSDAATA-YVVLRNQ.KSRYMPRYGLKRGLNDYSLAPYAFDFYEITSTSPLRARERHAQMKAAAIRGKASRMFGLDGNVSAQSENTERHTVEDVNTRVHSLSGAN..........................
POLG_SBMVN/2831-3063                   ...............................KDVNVGSK.-GKVVPRLQKITRKMNLPMVEGKIILS-LDHLLEYKPNQ..V.DLFNTRATRTQFEAWYNAVKDEYELDD.EQ-MGVVMNGFMVWCIDNGTSPDAN--GVW-----VM.........MDGE.EQI.EYPLKPIVENA..K.PTLRQIMHHFSDAAEA-YIEMRNS.ESPYMPRYGLLRNLRDRELARYAFDFYEVTSKTPNRAREAIAQMKAAALSGVNNKLFGLDGNISTNSENTERHTARDVNQNMHTLLG--mg........................
POLG_BVY3/3266-3488                    .............ltlpdvprdkrkglgarl--------.--------------------KGKPIIT-QTQIYNYRPAF..G.SIHNNKATDIELEAWKKQIADYFQV-D.DV--STLILGFMAYVIENGTSPEIFTNQKF---VMA-.........TSSG.EQR.EYPLAPFRSRS..-.VELRKIMRRFSEEAID-YIQIQREhNPQYVPRQAVVRNVKRAIYFPYCFDFIDETILTP-DALEIVHQMKAAALESASSKVLGLDGG-SARAIDTERHTTEDATARTHNLRGA-a.........................
POLG_BSTV1/2848-3091                   ...............................QDVADRTSgIVFPVPTRKS-TSLYLPPKVKLRATPERIEKVRKYLPDP..Q.QIDLRYSTQQELNDWIKASADGLGQTE.EAFIDNILPGWIVHCIVNTTSSENRKAGSWRCVTNAG.........TADE.EQV.LYDIEPMYSAA..N.PTMRAIMRHFSDLARLVIAESFKQ.GRPLIPKGYIKAGVLDASSAAAACDFVVRDRHDTATFVQVQNQVLVNRVSGITNRLFAQAMPSAGANEDMARHDAQDAAEGIHNLGGAR..........................
POLG_TUMVJ/2929-3162                   ...............................KEVNAGTS.GTFSVPRLKSLTSKMRVPRYEKRVALN-LDHLILYTPEQ..T.DLSNTRSTRKQFDTWFEGVMADYELTE.DK-MQIILNGLMVWCIENGTSPNIN--GMW-----VM.........MDGD.DQV.EFPIKPLIDHA..K.PTFRQIMAHFSDVAEA-YIEKRNQ.DRPYMPRYGLQRNLTDMSLARYAFDFYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTTVENTERHTTEDVNRNMHNLLGVQ..........................
A0A1W6GVB0_9POTY/2245-2439             ..........................ggiqt--------.--WVLPNLNKFERSSGFRKIGGRFVTT-KQAI-KSIPRDvrS.LMRNDVATDNQFMAWETEVRDEYSVAN.DEAWQTLLMAWALFCAHNGTTNKFR--HTD---VMPM.........PTGQgTTT.DVQIGGFVKAS..QqVGLRKIMRKLSRETSQ----MLNE.L-GEMTKWGMGHGIHDNWMIPYAFDFYLEDEYTPPP-----------------------------------------------------vhdrlaaakhaalgage.........
A0A1L3KNT4_9VIRU/2365-2594             ...........................dsdd------DE.IQWKMPAIQRHSLSRLVPTIQGRKVWN--AKVLKHIPEE..QfESNSARAKDEEYGAWVDAIKSSLGVKT.ETDYQIILTAWCLLCANSGTSSEMD-ASQF----LEV.........HDGN.GRVgKIQAKVFISPAklN.GGLRRIMRRLSEPTSQ----MLAR.GGRM-TTWGMKRGLFKREMIPYAFDFYVATPDTPKTVREQLAQAKIAAIGSGVQRAMITDGKLQRVRTSYERHTDGDNSEHEH------gd........................
POLG_TRMVU/2868-3108                   ......................lnatvvtks--------.------------YTYIPPIMKSLVTIDTAKKMADYTPPD..A.LISTQACTLEQFGRWANAAANGLGLSM.QAFQTDVVPYWIYWCIVNSASDEHKKLSSWTKVNMTIddatgqinlNEGE.AQT.IYEMSPMFDEA..K.PTLRAVMRHFGALAYRWVKFSIAK.RKPIIPHNAIKAGLMDVTYFPCCIDFVTVDQLSPQE-QNVRNQVINARVSDTPRALFKHAQRAGAGEEDTNLRRDDDANYGRTRVGGA-m.........................
#=GC seq_cons                          ..........................................a.hPth.t.t.hhh.Phhcsthshs.hp+lhpYhPcp..t.plpsshATppphpsWhpulpsshplsp.-t.hssllsuahlaCIpNGTSschp..t.W.....sh.........hsup.ppl.cYslcPhlppA..p.soLRpIMR+FS-.Apt.hh..hsp.ppshhs+aulp+GlpDhphA.YAFDFa..sppoP.cthEhptQhpsAslpuhs.phhuhss.hsstttss-RHsscDss.thHslhGs...........................
//