#=GF ID   Pox_A_type_inc
#=GF AC   PF04508.16
#=GF DE   Viral A-type inclusion protein repeat 
#=GF AU   Waterfield DI;0000-0003-2885-5126
#=GF AU   Finn RD;0000-0001-8626-2148
#=GF SE   Finn RD
#=GF GA   21.40 21.40;
#=GF TC   21.40 21.40;
#=GF NC   21.30 21.30;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -Z 75585367 -E 1000 HMM pfamseq
#=GF TP   Coiled-coil
#=GF RN   [1]
#=GF RM   2826668
#=GF RT   Cloning and characterization of the gene encoding the major
#=GF RT   protein of the A-type inclusion body of cowpox virus. 
#=GF RA   Funahashi S, Sato T, Shida H; 
#=GF RL   J Gen Virol 1988;69:35-47.
#=GF DR   INTERPRO; IPR007596;
#=GF DR   SO; 0001080; coiled_coil;
#=GF CC   The repeat is found in the A-type inclusion protein of the
#=GF CC   Poxvirus family [1].  
#=GF SQ   98
#=GS A0A3M9YH66_9PEZI/282-304  AC A0A3M9YH66.1
#=GS Q9JF74_VACCT/690-712      AC Q9JF74.1
#=GS ATI_VAR67/667-689         AC P34011.1
#=GS Q0GNT6_HSPV/690-712       AC Q0GNT6.1
#=GS A0A4Y9ADK8_9BACI/80-101   AC A0A4Y9ADK8.1
#=GS A0A397VMM6_9GLOM/77-99    AC A0A397VMM6.1
#=GS A0A0A6YDF3_9MICC/10-31    AC A0A0A6YDF3.1
#=GS Q0GNT6_HSPV/611-633       AC Q0GNT6.1
#=GS A0A223FNH8_9POXV/832-853  AC A0A223FNH8.1
#=GS A0A220T6J0_9POXV/368-390  AC A0A220T6J0.1
#=GS Q9JF74_VACCT/611-633      AC Q9JF74.1
#=GS A0A851P5H6_9GALL/509-531  AC A0A851P5H6.1
#=GS E9EEF4_METAQ/333-355      AC E9EEF4.1
#=GS A0A8C4C0C1_9TELE/414-432  AC A0A8C4C0C1.1
#=GS ATI_VAR67/612-634         AC P34011.1
#=GS Q0GNT7_HSPV/39-61         AC Q0GNT7.1
#=GS ATI4_VACCW/39-61          AC Q80HU9.1
#=GS Q89694_VAR67/124-146      AC Q89694.1
#=GS Q0GNT7_HSPV/131-153       AC Q0GNT7.1
#=GS M7UB30_BOTF1/670-690      AC M7UB30.1
#=GS A0A834CG47_ORYME/12-33    AC A0A834CG47.1
#=GS ATI_CAMPS/612-634         AC Q775Q2.1
#=GS A0A212FKE8_DANPL/44-63    AC A0A212FKE8.1
#=GS Q9JF76_VACCT/68-89        AC Q9JF76.1
#=GS A0A223FMW5_9POXV/868-889  AC A0A223FMW5.1
#=GS ATI_VACCW/611-633         AC P24759.2
#=GS A0A397UQC6_9GLOM/77-99    AC A0A397UQC6.1
#=GS A0A2I2KKL9_9ACTN/72-93    AC A0A2I2KKL9.1
#=GS A0A164ZDV9_XYLHT/394-415  AC A0A164ZDV9.1
#=GS Q9JF76_VACCT/8-30         AC Q9JF76.1
#=GS A0A4Y8D6G9_9HELO/659-680  AC A0A4Y8D6G9.1
#=GS ATI_VACCW/638-660         AC P24759.2
#=GS Q0GNT6_HSPV/638-660       AC Q0GNT6.1
#=GS ATI_CAMPS/691-713         AC Q775Q2.1
#=GS Q9JF76_VACCT/39-61        AC Q9JF76.1
#=GS A0A0L8IGN2_OCTBM/260-280  AC A0A0L8IGN2.1
#=GS Q0NP63_9POXV/31-52        AC Q0NP63.1
#=GS A0A3S2Q7E7_ORYJA/12-33    AC A0A3S2Q7E7.1
#=GS A0A6F9ALZ0_9TELE/81-99    AC A0A6F9ALZ0.1
#=GS A0A8J3CA78_9PSEU/80-102   AC A0A8J3CA78.1
#=GS ATI_VACCW/666-688         AC P24759.2
#=GS ATI_VACCW/690-712         AC P24759.2
#=GS ATI4_VACCW/157-179        AC Q80HU9.1
#=GS Q0GNT7_HSPV/68-89         AC Q0GNT7.1
#=GS Q89694_VAR67/3-25         AC Q89694.1
#=GS Q89694_VAR67/95-116       AC Q89694.1
#=GS Q0NP62_9POXV/639-661      AC Q0NP62.1
#=GS A0A0L8IHZ7_OCTBM/260-280  AC A0A0L8IHZ7.1
#=GS ATI_VAR67/639-661         AC P34011.1
#=GS A0A7X0LJX4_9BACT/35-54    AC A0A7X0LJX4.1
#=GS Q9JF74_VACCT/638-660      AC Q9JF74.1
#=GS G2WSA4_VERDV/251-273      AC G2WSA4.1
#=GS ATI_CAMPS/667-689         AC Q775Q2.1
#=GS E9HE28_DAPPU/95-117       AC E9HE28.1
#=GS Q89694_VAR67/152-173      AC Q89694.1
#=GS A0A2C5XPJ5_9HYPO/53-74    AC A0A2C5XPJ5.1
#=GS A0A0L8IGS3_OCTBM/260-280  AC A0A0L8IGS3.1
#=GS A0A164MT32_9CRUS/440-462  AC A0A164MT32.1
#=GS A0A8H4AZE0_GIGMA/35-57    AC A0A8H4AZE0.1
#=GS A0A0L8IGQ7_OCTBM/260-280  AC A0A0L8IGQ7.1
#=GS Q0GNT6_HSPV/666-688       AC Q0GNT6.1
#=GS Q0NP63_9POXV/179-200      AC Q0NP63.1
#=GS A0A384JG57_BOTFB/724-744  AC A0A384JG57.1
#=GS A0A2T7NYL4_POMCA/222-242  AC A0A2T7NYL4.1
#=GS ATI4_VACCW/131-152        AC Q80HU9.1
#=GS A0A3Q3EF22_9LABR/121-140  AC A0A3Q3EF22.1
#=GS Q0GNT7_HSPV/8-30          AC Q0GNT7.1
#=GS A0A0L8IGP5_OCTBM/260-280  AC A0A0L8IGP5.1
#=GS Q0NP62_9POXV/667-689      AC Q0NP62.1
#=GS Q9JF74_VACCT/666-688      AC Q9JF74.1
#=GS A0A423XGR7_9PEZI/272-294  AC A0A423XGR7.1
#=GS A0A517Z0H5_9PLAN/74-94    AC A0A517Z0H5.1
#=GS Q9JF76_VACCT/160-182      AC Q9JF76.1
#=GS A0A1I1XLP4_9BACI/80-98    AC A0A1I1XLP4.1
#=GS Q0NP62_9POXV/612-634      AC Q0NP62.1
#=GS Q0NP62_9POXV/691-713      AC Q0NP62.1
#=GS Q0NP63_9POXV/151-173      AC Q0NP63.1
#=GS ATI_CAMPS/639-661         AC Q775Q2.1
#=GS A0A0D1Y9S8_9EURO/638-660  AC A0A0D1Y9S8.1
#=GS ATI4_VACCW/185-206        AC Q80HU9.1
#=GS Q0NP63_9POXV/1-21         AC Q0NP63.1
#=GS Q89694_VAR67/32-53        AC Q89694.1
#=GS G2YXE3_BOTF4/738-758      AC G2YXE3.1
#=GS Q9JF76_VACCT/131-153      AC Q9JF76.1
#=GS A0A4Y7RXG9_9FIRM/101-123  AC A0A4Y7RXG9.1
#=GS G9N444_HYPVG/61-82        AC G9N444.1
#=GS A0A437AJU2_9MICR/177-196  AC A0A437AJU2.1
#=GS Q9JF76_VACCT/188-209      AC Q9JF76.1
#=GS E9G7Z1_DAPPU/59-81        AC E9G7Z1.1
#=GS ATI4_VACCW/8-30           AC Q80HU9.1
#=GS ATI4_VACCW/68-89          AC Q80HU9.1
#=GS A0A0N9HX79_9PSEU/80-98    AC A0A0N9HX79.1
#=GS A0A1Y1XH66_9FUNG/208-226  AC A0A1Y1XH66.1
#=GS G2MGS4_9EURY/49-70        AC G2MGS4.1
#=GS T2GCD3_MEGG1/91-111       AC T2GCD3.1
#=GS Q0NP63_9POXV/59-80        AC Q0NP63.1
#=GS Q0NP63_9POXV/122-144      AC Q0NP63.1
#=GS A0A183KM05_9TREM/527-548  AC A0A183KM05.1
A0A3M9YH66_9PEZI/282-304             renq----MLRHRIRDLERQLADAT--pg..
Q9JF74_VACCT/690-712                 ....TEISRLQSRISDLERQLNDCRRN....
ATI_VAR67/667-689                    ....TEISRLQSRILDLERQLNDCRHN....
Q0GNT6_HSPV/690-712                  ....TEISRLQSRISDLERQLNDCRRN....
A0A4Y9ADK8_9BACI/80-101              ...e-DINELRARISDLESQLDEQR--r...
A0A397VMM6_9GLOM/77-99               .ter---NRLRVRIDDLENRLTEAR--ag..
A0A0A6YDF3_9MICC/10-31               ...n-EVEALRSRIVDLESELAEAR--a...
Q0GNT6_HSPV/611-633                  ....RELEEERRRVRDLESRLDECTRN....
A0A223FNH8_9POXV/832-853             ....RELTRERAKIVELERELNKCFD-....
A0A220T6J0_9POXV/368-390             ...p-EVKELRERITDLEKQLDEATS-g...
Q9JF74_VACCT/611-633                 ....RELEEERRRVRDLESRLDECTRN....
A0A851P5H6_9GALL/509-531             ....REVETYRTRILELESSLAKCSQN....
E9EEF4_METAQ/333-355                 ....EEIEQLKGKVEDLEKELSIAKEN....
A0A8C4C0C1_9TELE/414-432             ..tt--MDALKNRIRDLEKQLS-----r...
ATI_VAR67/612-634                    ...g-ELEEERRRVRDLESRLDECTHN....
Q0GNT7_HSPV/39-61                    ....REMQRLRDRIMDLDRQLNECKRN....
ATI4_VACCW/39-61                     ....REMQRLRDRIMDLDRQLNECKRN....
Q89694_VAR67/124-146                 ...d-EINSKKNRISDLERQLTACKSN....
Q0GNT7_HSPV/131-153                  ....RELTCERNKIVELEKELNKCFD-a...
M7UB30_BOTF1/670-690                 ...n--ISSLQSKISELESSLSECTS-....
A0A834CG47_ORYME/12-33               ...p-EVSALREKVESLKNELTECR--a...
ATI_CAMPS/612-634                    ....RELEEERRRVKDLESRLDECTRN....
A0A212FKE8_DANPL/44-63               ...n--IDAYRRKIEDLESKLKQC---q...
Q9JF76_VACCT/68-89                   ....EEVNRLKTRIRNLKRSLEIC---sk..
A0A223FMW5_9POXV/868-889             ....RELTRERAKIVELERELNKCFD-....
ATI_VACCW/611-633                    ....RELEEERRRVRDLESRLDECTRN....
A0A397UQC6_9GLOM/77-99               .ter---NRLRVRIDDLENRLTEAR--ag..
A0A2I2KKL9_9ACTN/72-93               ...h-EVEQLRDRVRDLERCLDDAH--r...
A0A164ZDV9_XYLHT/394-415             ...p-ELRAERERVRDLERQLEEARD-....
Q9JF76_VACCT/8-30                    ....REMRRLRDRISDIERQLSDCRRN....
A0A4Y8D6G9_9HELO/659-680             ..en--ISSLQSKISELESSLSECTS-....
ATI_VACCW/638-660                    ....QEVDALRSRIRELENKLTDCIE-s...
Q0GNT6_HSPV/638-660                  ....QEVDALRSRIRELENKLTDCIE-s...
ATI_CAMPS/691-713                    ....TEISRLESRISDLERQLNDCRRN....
Q9JF76_VACCT/39-61                   ....REMQRLRDRIMDLDRQLNECKRN....
A0A0L8IGN2_OCTBM/260-280             ...a-EVDRLKTRISELKQSLNE----qr..
Q0NP63_9POXV/31-52                   ....-EMQRLRDRIMDLDRQLNECKRN....
A0A3S2Q7E7_ORYJA/12-33               ...p-EVSALREKVESLKNELTECR--a...
A0A6F9ALZ0_9TELE/81-99               ..tt--LNALKTRIRDLEKQLS-----r...
A0A8J3CA78_9PSEU/80-102              ...d-ELDQLRERISELEGELAETR--ag..
ATI_VACCW/666-688                    ....TEISRLQSKISDLERQLSECREN....
ATI_VACCW/690-712                    ....TEISRLQSRISDLERQLNDCRRN....
ATI4_VACCW/157-179                   ...d-EINSKKTRISDLERQLAACKSN....
Q0GNT7_HSPV/68-89                    ....EEVNRLKTRIRNLKRSLEIC---sk..
Q89694_VAR67/3-25                    ...k-EIQRLRDRIMDLDRQLNECKRN....
Q89694_VAR67/95-116                  ....RELTRERNKIVELEKELNKCFD-....
Q0NP62_9POXV/639-661                 ....QEVDALRSRIRELENKLTDCIE-s...
A0A0L8IHZ7_OCTBM/260-280             ...a-EVDRLKTRISELKQSLNE----qr..
ATI_VAR67/639-661                    ....QEVDALRSRISELENKLTDCIE-s...
A0A7X0LJX4_9BACT/35-54               ..rs-EIAELKRRISDLERRLN-----y...
Q9JF74_VACCT/638-660                 ....QEVDALRSRIRELENKLTDCIE-s...
G2WSA4_VERDV/251-273                 renq----MLRHRIRDLERQLADAT--pg..
ATI_CAMPS/667-689                    ....TEISRLQSRISDLERQLNECRGN....
E9HE28_DAPPU/95-117                  ....ESMSRLREKISDLESELSIARN-s...
Q89694_VAR67/152-173                 ...d--MDQYKREIESLKRELTKCRRG....
A0A2C5XPJ5_9HYPO/53-74               renq----MLRLRIRDLEKQLAEC---sp..
A0A0L8IGS3_OCTBM/260-280             ...a-EVDRLKTRISELKQSLNE----qr..
A0A164MT32_9CRUS/440-462             ....ESMSRLREKISDLESELSIARN-s...
A0A8H4AZE0_GIGMA/35-57               ....REVRRLQRRISDLEEELNE----rric
A0A0L8IGQ7_OCTBM/260-280             ...a-EVDRLKTRISELKQSLNE----qr..
Q0GNT6_HSPV/666-688                  ....TEISRLQSRISDLERQLSECREN....
Q0NP63_9POXV/179-200                 ...d--MDQYKREIESLKRELAECRRG....
A0A384JG57_BOTFB/724-744             ...n--ISSLQSKISELESSLSECTS-....
A0A2T7NYL4_POMCA/222-242             ....EEINQLKSKVSDLEQQLADAT--....
ATI4_VACCW/131-152                   ....RELTRERNKIVELEKELNKCFD-....
A0A3Q3EF22_9LABR/121-140             ....TSLDALKARIRDLEKQLSK----g...
Q0GNT7_HSPV/8-30                     ....REMRRLRDRISDIERQLSDCRRN....
A0A0L8IGP5_OCTBM/260-280             ...a-EVDRLKTRISELKQSLNE----qr..
Q0NP62_9POXV/667-689                 ....TEISRLQSRISDLERQLSECRGN....
Q9JF74_VACCT/666-688                 ....TEISRLQSKISDLERQLSECREN....
A0A423XGR7_9PEZI/272-294             renq----MLRHRIRDLERQLAECT--pg..
A0A517Z0H5_9PLAN/74-94               ....-EVTRLQARIAELERQLAAAR--t...
Q9JF76_VACCT/160-182                 ...d-EINSKKTRISDLERQLAACKSN....
A0A1I1XLP4_9BACI/80-98               ...e-DINELRARISELESQLAE----....
Q0NP62_9POXV/612-634                 ....RELEEERRRVRDLESSLDECTRN....
Q0NP62_9POXV/691-713                 ....TEISRLQSRISDLERELNDCRRN....
Q0NP63_9POXV/151-173                 ...d-EINSKKTRISDLERQLAACKSN....
ATI_CAMPS/639-661                    ....QEVDALRSRIRELENKLTDCIE-s...
A0A0D1Y9S8_9EURO/638-660             ...k-EVDSLRSRIADLEKRLSTARE-s...
ATI4_VACCW/185-206                   ...n--MDQYKREIESLKRELAECRRG....
Q0NP63_9POXV/1-21                    ....--MRRLRDRISDLERQLNDCRRN....
Q89694_VAR67/32-53                   ....EEVNRLKTRISDLKQSLEICLK-....
G2YXE3_BOTF4/738-758                 ...n--ISSLQSKISELESSLSECTS-....
Q9JF76_VACCT/131-153                 ....RELTRERNKIVELEKELNKCFD-a...
A0A4Y7RXG9_9FIRM/101-123             ...k-EIQALKSEIASLKSQLADCKEN....
G9N444_HYPVG/61-82                   ....REIEKLKLRISDLESELAECKK-....
A0A437AJU2_9MICR/177-196             ....---SSYRNRISDLEKELDEAF--lg..
Q9JF76_VACCT/188-209                 ...n--MDQYKREIESLKRELAECRRG....
E9G7Z1_DAPPU/59-81                   ....ESMSRLREKISDLESELSIARN-s...
ATI4_VACCW/8-30                      ....REMRRLRDRISDIERQLSDCRRN....
ATI4_VACCW/68-89                     ....EEVNRLKTRIRNLKRSLEIC---sk..
A0A0N9HX79_9PSEU/80-98               ...a-EVDELRTRVADLERQLAD----....
A0A1Y1XH66_9FUNG/208-226             ....---NQLRDRIRELEKELEECKN-....
G2MGS4_9EURY/49-70                   ....EELTRLQRRIEDLETKLTAARD-....
T2GCD3_MEGG1/91-111                  ...t--ISQLQTRIQELERELEEARD-....
Q0NP63_9POXV/59-80                   ....EEVNRLKTRIRDLERSLEIC---sk..
Q0NP63_9POXV/122-144                 ....RELTRERNKIVELEKELNKCFD-a...
A0A183KM05_9TREM/527-548             ...n-EITMLRNRISELESQLNTCRS-....
#=GC seq_cons                        .....ElspL+sRIpDLEppLs-Cpp.....
//