#=GF ID   RE_R_Pab1
#=GF AC   PF09522.14
#=GF DE   R.Pab1 restriction endonuclease
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF SE   Bateman A
#=GF GA   25.00 25.00;
#=GF TC   27.00 32.00;
#=GF NC   24.70 21.20;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -Z 75585367 -E 1000 HMM pfamseq
#=GF TP   Domain
#=GF RN   [1]
#=GF RM   17332011
#=GF RT   Novel protein fold discovered in the PabI family of restriction
#=GF RT   enzymes. 
#=GF RA   Miyazono KI, Watanabe M, Kosinski J, Ishikawa K, Kamo M,
#=GF RA   Sawasaki T, Nagata K, Bujnicki JM, Endo Y, Tanokura M, Kobayashi
#=GF RA   I; 
#=GF RL   Nucleic Acids Res. 2007; [Epub ahead of print]
#=GF DR   INTERPRO; IPR018576;
#=GF DR   SCOP; 2dvy; fa;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF SQ   15
#=GS A0A268TEE1_9HELI/133-253  AC A0A268TEE1.1
#=GS A0A3D8I0I0_9HELI/131-251  AC A0A3D8I0I0.1
#=GS V8C9Q6_9HELI/2-110        AC V8C9Q6.1
#=GS D9Q019_ACIS3/61-174       AC D9Q019.1
#=GS V8C847_9HELI/133-254      AC V8C847.1
#=GS A0A4U8UFG6_9HELI/1-37     AC A0A4U8UFG6.1
#=GS A0A329ZQJ5_9HELI/129-249  AC A0A329ZQJ5.1
#=GS V2QE87_9BACT/133-252      AC V2QE87.1
#=GS O25246_HELPY/34-151       AC O25246.1
#=GS A0A6L5WJB4_9PROT/112-233  AC A0A6L5WJB4.1
#=GS A0A2H5X9Q2_9BACT/73-183   AC A0A2H5X9Q2.1
#=GS I7HEW8_9HELI/131-249      AC I7HEW8.1
#=GS A0A377PQJ1_9HELI/131-197  AC A0A377PQJ1.1
#=GS A0A809SE82_9MOLU/1-109    AC A0A809SE82.1
#=GS T1D3C2_9HELI/13-73        AC T1D3C2.1
A0A268TEE1_9HELI/133-253             ............................LEILRTHPKNKKILGIDFYCSEVKYPLLVHPFDKFDILVEIIIREKQRAIGAQPMVYV...CFP..VTELi.eK...N..N.T.QLLGRCAKTKEFAHLILD.FTHKNLLLGLFKIFGILSPAHNHDVLEILKII.....
A0A3D8I0I0_9HELI/131-251             ............................LQIFRSHPKQKQILDIEFYVSEVKYPLLVHKFGNFDVLVEIIIKEKQRAIGVQPMLYM...CFP..ITEL...E...SkeN.I.GFLGRVARAKECGILSLD.ARHKTFVFECFKIFGILSKNHNYDVLEILRVI.....
V8C9Q6_9HELI/2-110                   ...........................r-------------AGIEFLQSSVSYPLLVHKFSDKDMICEIIVREKQFAVGTMPMLYF...CVElgVLKD...K...N..N.S.TFIGRAVQSGESGFLEIS.DKNRDIFMQMFRIFALLSKSHKHDCLAIL---gyl..
D9Q019_ACIS3/61-174                  iqriednryynefklineltpilrldgl--------------------------------TD-NYYIDIILKPKQRAVGYQAMVFLyipCEK..ALPL...E...D..G.Q.KLIGRKAYQNEKVKVFLN.S---DHILGLLKSFLLASDTHRKDILNILR--yl...
V8C847_9HELI/133-254                 ............................LAILRSHPITRNILGVEFYHSEVKYPLLMRTFSVFDILVEIIIKEKQRAIGTQPMLYV...CFP..ITQLcptN...G..N.I.ALLGRVAQQKEKAHLILD.STHKQFLLESFKIFGILSPNHNHDVREILKII.....
A0A4U8UFG6_9HELI/1-37                ............................----------------------------------------------------------...---..----...-...-..-.-.-------------MLSLD.ARHKTFVLECFKIFGILSKNHHYDVLQILHLI.....
A0A329ZQJ5_9HELI/129-249             ............................FSILRTHPIEREILGINFYHSQVQYPLLVHKFGVFDILVEIIIKEKQRAIGVQPMLYV...CFP..ITEL...Rp.qN..N.I.PLLGRVAEQKECASLILD.ANHKNFLLESFRIFGILSPSHNHDIRQILER-m....
V2QE87_9BACT/133-252                 ...........................l-SVQRCHPVEYELEGINFQKSIVQYPLLLYKLSSFDVLVEIIIKEKQYAVGLQPMLYV...CFP..VTKL...Q...A..D.SdPLIGRCAKEKEKAYLILD.ESHKEFVLQTFKIFALLSQAHKNDVISIINLI.....
O25246_HELPY/34-151                  ............................FMITRERFRSHQFGGMDFELSRISYPLLIHSFDD-NELSEIVIREQQYGSKTQAMLYF...CFS..ILEL...K...T..A.T.PLLNRTATLKEHAFLTIH.KANAPMFLEMLKIFGLLSQAHHSDVLKILEKI.....
A0A6L5WJB4_9PROT/112-233             ..........................es--ITRSHFVPETINNIEFLKSKVSYPLLISKFQNDDLLCEIIVREKQRAVGTIPMLYF...CIS..LASI...KdknG..N.F.SFIGRKINSKESGYLEIN.NNNILIFIKIFKIFGLLSKAHKYDCLEILNYI.....
A0A2H5X9Q2_9BACT/73-183              ..............frvqdeptpeefvg-----------------FEVWWRKHPVLHREVDD-AAIIEIEVRHRQKAVGFQAMVFL...LVP..LCYC...E...-..P.P.NLIGRTAERNEHALW---.SPPMEVLKVLVQAFAIASKRHKDDMVKLLREI.....
I7HEW8_9HELI/131-249                 ............................LQILRSHPISKKILGVEFYESQVKYPLLVHKFNHFDVLVEIIIKEKQRAVGVQPMLYV...CFP..ITEL...H...C..N.P.VLLGRVTESKECGLLILD.SKDKNFLLEIFKIFGMLSKNHNYDVCEIVKII.....
A0A377PQJ1_9HELI/131-197             ............................LQILRSHPVSKKILGVEFYQSQIAYPLLVHKFNHFDVFIEIVIKEKQRAVGVQPMLYV...CFP..ITQL...Q...C..-.-.------------------.--------------------------------.....
A0A809SE82_9MOLU/1-109               .........................mii--------------PLTFNEYEIVKPVLISEYID-NDFIEIKIKNKQKAVGIQPMLFL...NLS..AKNF...Y...I..NnE.SIIGKNIQTKDVIQYVIDpKKFMNLFVNLLLVFANLSKEHNQDILRILNSI.....
T1D3C2_9HELI/13-73                   ..iqiplttqsgkirvkehnsfyeygpp----------------------------------------------------------...---..----...-...-..-.-.-------------TLILD.SKHKNFILECFKIFGVLSPNHNHDT-------rdfks
#=GC seq_cons                        ..............................l.Rp+.h..ph.slpF.pSplpYPLLl+cFss.DhllEIII+EKQ+AlGsQPMLYl...Chs..lspL...c...s..s...sllGRssppKEpuhLhLD.spp+shlLphFKIFGlLSpsHpaDllpILchI.....
//