GenomeNet

Database: Pfam
Entry: Reo_sigmaC
LinkDB: Reo_sigmaC
Original site: Reo_sigmaC 
#=GF ID   Reo_sigmaC
#=GF AC   PF04582.16
#=GF DE   Reovirus sigma C capsid protein C-terminal domain
#=GF AU   Mifsud W;0000-0002-9805-6461
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF SE   Pfam-B_2922 (release 7.5)
#=GF GA   28.10 28.10;
#=GF TC   29.60 55.30;
#=GF NC   26.60 23.20;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF CL   CL0326
#=GF RN   [1]
#=GF RM   11752709
#=GF RT   Subunit composition and conformational stability of the
#=GF RT   oligomeric form of the avian reovirus cell-attachment protein
#=GF RT   sigmaC. 
#=GF RA   Grande A, Costas C, Benavente J; 
#=GF RL   J Gen Virol 2002;83:131-139.
#=GF DR   INTERPRO; IPR007662;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF SQ   2
#=GS A0A0A0QMX6_9VIRU/197-326  AC A0A0A0QMX6.1
#=GS W0FVN2_9VIRU/190-320      AC W0FVN2.1
A0A0A0QMX6_9VIRU/197-326             ...LMQFRWMARGTNGSS.DTIDMTVNAHCHGRRTDYMMSSTGNLTVT.SNVVLLTFDLSDITHIPSDLARLVPSAGFQAASFPVDVSFT..RDSATHAYQAYGVYSSSRVFTITFPTGGDGTANIRSLTVRTGIDT..
W0FVN2_9VIRU/190-320                 vge-----WLGTVISGQSqSSAIMNVRIHSFGQRTMLLMSSQNVFTIPpGSGASLQLDVTRITTPAIDVAMVTPSAAFASASFMADIAFKdsKTGEVHALHTTGSFRSP-SFSIAWVPVASETRNYQIMALRFTV--at
#=GC seq_cons                        ........WhupshsGpS.soh.MsVphHsaGpRT.hhMSSpsshTls.usss.LphDlocITp.s.DlAhlsPSAuFtuASF.sDluFp..+sutsHAhpshGsapSs.sFoIsasssustTtNhp.hslRhsl....
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