#=GF ID Ribosomal_L40e
#=GF AC PF01020.21
#=GF DE Ribosomal L40e family
#=GF AU Bateman A;0000-0002-6982-4660
#=GF SE Pfam-B_884 (release 3.0)
#=GF GA 23.00 23.00;
#=GF TC 23.00 23.00;
#=GF NC 22.90 22.90;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch -E 1000 --cpu 4 -Z 75585367 HMM pfamseq
#=GF TP Family
#=GF CL CL0167
#=GF RN [1]
#=GF RM 3129699
#=GF RT RNA binding proteins of the large subunit of bovine
#=GF RT mitochondrial ribosomes.
#=GF RA Piatyszek MA, Denslow ND, O'Brien TW;
#=GF RL Nucleic Acids Res 1988;16:2565-2583.
#=GF RN [2]
#=GF RM 7488009
#=GF RT The carboxyl extensions of two rat ubiquitin fusion proteins are
#=GF RT ribosomal proteins S27a and L40.
#=GF RA Chan YL, Suzuki K, Wool IG;
#=GF RL Biochem Biophys Res Commun 1995;215:682-690.
#=GF DR INTERPRO; IPR001975;
#=GF DR SO; 0100021; polypeptide_conserved_region;
#=GF CC Bovine L40 has been identified as a secondary RNA binding
#=GF CC protein [1]. L40 is fused to a ubiquitin protein [2].
#=GF SQ 2531
#=GS A0A453IGY4_AEGTS/79-126 AC A0A453IGY4.1
#=GS A0A7J8IE88_MOLMO/78-127 AC A0A7J8IE88.1
#=GS A0A0E0CXL8_9ORYZ/78-127 AC A0A0E0CXL8.1
#=GS A0A2I3TJC0_PANTR/78-102 AC A0A2I3TJC0.1
#=GS M0TVP4_MUSAM/78-127 AC M0TVP4.1
#=GS L0JJD4_NATP1/4-45 AC L0JJD4.1
#=GS A0A1Z8JJT6_PICKU/78-127 AC A0A1Z8JJT6.1
#=GS A0A498JPT5_MALDO/78-127 AC A0A498JPT5.1
#=GS A0A2Y9JLH9_ENHLU/49-97 AC A0A2Y9JLH9.1
#=GS A0A218X2Y8_PUNGR/78-127 AC A0A218X2Y8.1
#=GS A0A2Y9JHH1_ENHLU/78-126 AC A0A2Y9JHH1.1
#=GS A0A850XID2_PIACA/44-93 AC A0A850XID2.1
#=GS A0A453IGI5_AEGTS/151-171 AC A0A453IGI5.1
#=GS RL40_SULTO/5-50 AC Q976I5.1
#=GS A0A8H4PZ21_9HYPO/586-635 AC A0A8H4PZ21.1
#=GS A0A7D5DXU0_9EURY/8-43 AC A0A7D5DXU0.1
#=GS A0A8J2Q5Y6_9HEXA/78-127 AC A0A8J2Q5Y6.1
#=GS A0A834JP14_VESGE/78-127 AC A0A834JP14.1
#=GS A0A8D2MQN4_ZONAL/70-119 AC A0A8D2MQN4.1
#=GS A0A168BDV4_9EURO/82-131 AC A0A168BDV4.1
#=GS D3TAJ1_ACIB4/6-44 AC D3TAJ1.1
#=GS RL40_FELCA/78-127 AC P63052.2
#=GS H6C353_EXODN/78-127 AC H6C353.1
#=GS A0A1Y1VMR3_9FUNG/78-124 AC A0A1Y1VMR3.1
#=GS A0A5J4YQG1_PORPP/78-127 AC A0A5J4YQG1.1
#=GS A0A6P9AXU6_PANGU/78-100 AC A0A6P9AXU6.1
#=GS A0A671V6Y0_SPAAU/78-127 AC A0A671V6Y0.1
#=GS A0A1V1TD36_9FUNG/78-127 AC A0A1V1TD36.1
#=GS A0A1J7FW58_LUPAN/78-127 AC A0A1J7FW58.1
#=GS A0A8C4SJU0_ERPCA/78-127 AC A0A8C4SJU0.1
#=GS A0A507DQZ2_9FUNG/78-127 AC A0A507DQZ2.1
#=GS A0A453IGM8_AEGTS/151-198 AC A0A453IGM8.1
#=GS A0A3B6DMY9_WHEAT/86-135 AC A0A3B6DMY9.1
#=GS V6LTL1_9EUKA/78-124 AC V6LTL1.1
#=GS A0A4T0X5U5_9ASCO/78-127 AC A0A4T0X5U5.1
#=GS A0A7L4JEK3_9PASS/78-127 AC A0A7L4JEK3.1
#=GS A0A0D2R520_GOSRA/78-101 AC A0A0D2R520.1
#=GS Q5CYH8_CRYPI/82-131 AC Q5CYH8.1
#=GS A0A2A2KQ79_9BILA/78-127 AC A0A2A2KQ79.1
#=GS A0A2R6Q9A6_ACTCC/78-127 AC A0A2R6Q9A6.1
#=GS E1ZX35_CAMFO/78-127 AC E1ZX35.1
#=GS M3ZNY8_XIPMA/305-354 AC M3ZNY8.2
#=GS A0A094CX20_9PEZI/752-801 AC A0A094CX20.1
#=GS A0A448YRF8_BRENA/78-127 AC A0A448YRF8.1
#=GS A0A803M3M9_CHEQI/55-100 AC A0A803M3M9.1
#=GS A0A8B6DLP3_MYTGA/78-121 AC A0A8B6DLP3.1
#=GS A0A8X7SUX5_9BASI/78-127 AC A0A8X7SUX5.1
#=GS A0A8H5NBZ6_9HYPO/563-612 AC A0A8H5NBZ6.1
#=GS M0R2S1_HUMAN/60-85 AC M0R2S1.1
#=GS Q4PM08_IXOSC/73-122 AC Q4PM08.1
#=GS A0A7L4N479_9AVES/78-127 AC A0A7L4N479.1
#=GS A8XER6_CAEBR/96-139 AC A8XER6.1
#=GS A0A8C9JGQ7_PANTA/78-127 AC A0A8C9JGQ7.1
#=GS A0A819WQW8_9BILA/78-127 AC A0A819WQW8.1
#=GS A0A8C9NF23_SERCA/78-127 AC A0A8C9NF23.1
#=GS A0A2G5UNL2_9PELO/78-127 AC A0A2G5UNL2.1
#=GS A0A803L2W7_CHEQI/84-133 AC A0A803L2W7.1
#=GS A0A3N7FSP5_POPTR/84-104 AC A0A3N7FSP5.1
#=GS A0A8C3LA38_CHRPC/78-100 AC A0A8C3LA38.1
#=GS A0A8J5Y730_9ROSI/78-127 AC A0A8J5Y730.1
#=GS A0A6A9SXT3_9EURY/7-45 AC A0A6A9SXT3.1
#=GS A0A812H0H5_9DINO/78-127 AC A0A812H0H5.1
#=GS W2TDZ1_NECAM/78-127 AC W2TDZ1.1
#=GS A0A498SRX8_ACAVI/31-80 AC A0A498SRX8.1
#=GS A0A0K3CTK7_RHOTO/78-122 AC A0A0K3CTK7.1
#=GS A0A4U5J8C2_9EURY/5-45 AC A0A4U5J8C2.1
#=GS A0A7R8H4U7_LEPSM/60-109 AC A0A7R8H4U7.1
#=GS A0A811N6D1_9POAL/84-133 AC A0A811N6D1.1
#=GS A0A1B9G2U2_9TREE/78-127 AC A0A1B9G2U2.1
#=GS A0A094BL17_9PEZI/581-630 AC A0A094BL17.1
#=GS A0A6P3QRY8_PTEVA/78-127 AC A0A6P3QRY8.1
#=GS A0A852DS11_PASAF/78-106 AC A0A852DS11.1
#=GS A0A6G1DLY0_9ORYZ/64-113 AC A0A6G1DLY0.1
#=GS A0A0C9ML83_9FUNG/1-34 AC A0A0C9ML83.1
#=GS RL40B_ORYSJ/78-127 AC P0CH35.1
#=GS C0NSR9_AJECG/483-532 AC C0NSR9.1
#=GS A0A175WEY6_9PEZI/662-711 AC A0A175WEY6.1
#=GS A0A7K5A1I1_9AVES/78-127 AC A0A7K5A1I1.1
#=GS A0A8B9YVZ5_BOSMU/78-127 AC A0A8B9YVZ5.1
#=GS H2SBM2_TAKRU/78-127 AC H2SBM2.1
#=GS A0A6G1F4J3_9ORYZ/300-349 AC A0A6G1F4J3.1
#=GS A0A7J7EM30_DICBM/64-102 AC A0A7J7EM30.1
#=GS A0A5C3ENZ5_9BASI/78-127 AC A0A5C3ENZ5.1
#=GS A0A328PEK8_9EURY/5-44 AC A0A328PEK8.1
#=GS C1BG62_ONCMY/78-127 AC C1BG62.1
#=GS A0A554N8Y9_9EURY/6-45 AC A0A554N8Y9.1
#=GS A0A1U8LSN7_GOSHI/78-127 AC A0A1U8LSN7.1
#=GS A5HSG7_ARTAN/78-127 AC A5HSG7.1
#=GS A0A1B9GHJ8_9TREE/78-127 AC A0A1B9GHJ8.1
#=GS A8N407_COPC7/78-127 AC A8N407.1
#=GS E9AI36_LEIBR/65-114 AC E9AI36.1
#=GS A0A663EA92_AQUCH/78-106 AC A0A663EA92.1
#=GS A0A5D2XEU3_GOSMU/78-127 AC A0A5D2XEU3.1
#=GS Q8ID50_PLAF7/78-127 AC Q8ID50.1
#=GS A0A3B6MPP4_WHEAT/89-138 AC A0A3B6MPP4.1
#=GS A0A2K5VQR3_MACFA/182-231 AC A0A2K5VQR3.1
#=GS A0A7K5CZJ5_9TYRA/78-127 AC A0A7K5CZJ5.1
#=GS A0A7M7MI76_VARDE/83-132 AC A0A7M7MI76.1
#=GS A0A0R3SR70_HYMDI/78-127 AC A0A0R3SR70.1
#=GS RL402_SCHPO/78-127 AC P0CH07.1
#=GS A0A4P2VEW2_9ARCH/4-56 AC A0A4P2VEW2.1
#=GS A0A498GDZ5_9EURY/4-45 AC A0A498GDZ5.1
#=GS R0KN34_ANAPL/33-82 AC R0KN34.1
#=GS A2YLE5_ORYSI/84-133 AC A2YLE5.1
#=GS A0A8J8C768_9EURY/6-44 AC A0A8J8C768.1
#=GS A0A328DZ09_9ASTE/1-41 AC A0A328DZ09.1
#=GS R0FQS3_9BRAS/92-141 AC R0FQS3.1
#=GS A0A7K6ATD0_UPUEP/78-106 AC A0A7K6ATD0.1
#=GS J3M7U4_ORYBR/86-135 AC J3M7U4.1
#=GS A0A2C5WYI8_9PEZI/412-461 AC A0A2C5WYI8.1
#=GS A0A0B2WPB5_METAS/541-590 AC A0A0B2WPB5.1
#=GS A0A067E068_CITSI/78-97 AC A0A067E068.1
#=GS A0A4U6VSI4_SETVI/86-135 AC A0A4U6VSI4.1
#=GS A0A7L2DL54_CATFU/78-127 AC A0A7L2DL54.1
#=GS A0A2U1MVW4_ARTAN/85-134 AC A0A2U1MVW4.1
#=GS A0A163CHY8_DIDRA/78-127 AC A0A163CHY8.1
#=GS A0A6A7LFC8_9ARCH/5-50 AC A0A6A7LFC8.1
#=GS A0A8C5M2U7_9ANUR/78-126 AC A0A8C5M2U7.1
#=GS A0A6I9ZHL7_ACIJB/78-127 AC A0A6I9ZHL7.1
#=GS A0A836FP79_9HYME/78-127 AC A0A836FP79.1
#=GS A0A6V7W1C0_9BILA/78-127 AC A0A6V7W1C0.1
#=GS A0A7G2C1P9_9TRYP/78-127 AC A0A7G2C1P9.1
#=GS A0A087H8S0_ARAAL/78-127 AC A0A087H8S0.1
#=GS A0A238FLC4_9BASI/79-128 AC A0A238FLC4.1
#=GS A0A811YFZ9_NYCPR/78-127 AC A0A811YFZ9.1
#=GS A0A8C8B1K4_9STRI/78-127 AC A0A8C8B1K4.1
#=GS A0A833QL41_9POAL/31-76 AC A0A833QL41.1
#=GS A0A673WYA8_SALTR/97-146 AC A0A673WYA8.1
#=GS D5GKA5_TUBMM/110-159 AC D5GKA5.1
#=GS A0A0Q3WS77_AMAAE/1-34 AC A0A0Q3WS77.1
#=GS A0A0D3FGF9_9ORYZ/80-116 AC A0A0D3FGF9.1
#=GS A0A667YXX6_9TELE/78-127 AC A0A667YXX6.1
#=GS A0A6V8QMP1_9HYPO/106-155 AC A0A6V8QMP1.1
#=GS A0A7M7NA73_STRPU/78-116 AC A0A7M7NA73.1
#=GS A0A7J0EC03_9ERIC/36-66 AC A0A7J0EC03.1
#=GS L0KWZ9_METHD/7-45 AC L0KWZ9.1
#=GS A0A166THI2_9EURY/4-45 AC A0A166THI2.1
#=GS A0A7K5L8C8_VIRAL/78-127 AC A0A7K5L8C8.1
#=GS RL40_STAMF/5-50 AC A3DMD0.1
#=GS A0A830CH70_9LAMI/79-127 AC A0A830CH70.1
#=GS RL40_HALWD/4-45 AC Q18KJ5.1
#=GS A0A3P9CIY7_9CICH/78-127 AC A0A3P9CIY7.1
#=GS A0A2X0NYG4_9BASI/89-138 AC A0A2X0NYG4.1
#=GS A0A674GRA1_TAEGU/78-102 AC A0A674GRA1.1
#=GS A0A852C1U2_9PICI/78-127 AC A0A852C1U2.1
#=GS A0A061DAT2_BABBI/78-127 AC A0A061DAT2.1
#=GS B9SWD7_RICCO/78-127 AC B9SWD7.1
#=GS G0NSJ5_CAEBE/78-127 AC G0NSJ5.1
#=GS A0A8C8W9D4_PANLE/106-140 AC A0A8C8W9D4.1
#=GS A0A813VY23_9BILA/78-127 AC A0A813VY23.1
#=GS A0A820TKJ3_9BILA/78-132 AC A0A820TKJ3.1
#=GS A2XEQ8_ORYSI/80-128 AC A2XEQ8.1
#=GS A0A0J8B525_BETVV/78-127 AC A0A0J8B525.1
#=GS A0A8R1I5H7_CAEJA/78-127 AC A0A8R1I5H7.1
#=GS A0A8I5R2T0_PAPAN/123-155 AC A0A8I5R2T0.1
#=GS A0A0D1Z115_9EURO/129-178 AC A0A0D1Z115.1
#=GS A0A6P5YB12_DURZI/78-127 AC A0A6P5YB12.1
#=GS A0A670XTR3_PSETE/78-127 AC A0A670XTR3.1
#=GS A0A2T3ZD93_9HYPO/92-120 AC A0A2T3ZD93.1
#=GS A0A3L6S9L0_PANMI/78-127 AC A0A3L6S9L0.1
#=GS A0A370TFL5_9HELO/113-162 AC A0A370TFL5.1
#=GS Q6C2D7_YARLI/78-127 AC Q6C2D7.1
#=GS A0A834ZIL4_9MAGN/78-127 AC A0A834ZIL4.1
#=GS A0A4X2LDN5_VOMUR/72-121 AC A0A4X2LDN5.1
#=GS Q3B7P7_DANRE/78-127 AC Q3B7P7.1
#=GS A0A0M9FWT9_LEPPY/78-127 AC A0A0M9FWT9.1
#=GS A0A7L0U9S8_CHOAC/78-127 AC A0A7L0U9S8.1
#=GS A0A0N4UMJ1_DRAME/78-127 AC A0A0N4UMJ1.1
#=GS A0A7K4T0Z2_9CHAR/78-98 AC A0A7K4T0Z2.1
#=GS A0A5E3XL36_9AGAM/78-127 AC A0A5E3XL36.1
#=GS A7E993_SCLS1/78-127 AC A7E993.1
#=GS A0A6P6DNR8_OCTDE/49-98 AC A0A6P6DNR8.1
#=GS C5LQT3_PERM5/92-141 AC C5LQT3.1
#=GS A0A2N3N8T7_9PEZI/191-240 AC A0A2N3N8T7.1
#=GS A0A852AC26_CALOR/78-106 AC A0A852AC26.1
#=GS A0A251UKK8_HELAN/78-127 AC A0A251UKK8.1
#=GS A0A6J0MR38_RAPSA/78-127 AC A0A6J0MR38.1
#=GS A0A672UYL5_STRHB/84-133 AC A0A672UYL5.1
#=GS RL40_BOVIN/78-127 AC P63048.2
#=GS K8EHK7_9CHLO/84-133 AC K8EHK7.1
#=GS A0A8J4PKW2_9MYCE/77-126 AC A0A8J4PKW2.1
#=GS A0A484NSY8_9ASTE/83-132 AC A0A484NSY8.1
#=GS A0A8C8HRV8_ONCTS/78-107 AC A0A8C8HRV8.1
#=GS A0A2K6PTG2_RHIRO/182-231 AC A0A2K6PTG2.1
#=GS S7Q187_MYOBR/1-46 AC S7Q187.1
#=GS A0A8H5EUD2_9AGAR/78-127 AC A0A8H5EUD2.1
#=GS A0A6G8T4P7_9EURY/7-45 AC A0A6G8T4P7.1
#=GS A0A0R3PFF6_ANGCS/78-127 AC A0A0R3PFF6.1
#=GS A0A8R7QPV2_TRIUA/85-134 AC A0A8R7QPV2.1
#=GS A0A1E3I090_9TREE/78-115 AC A0A1E3I090.1
#=GS A0A2K5HK93_COLAP/78-127 AC A0A2K5HK93.1
#=GS A0A0J8B8M5_BETVV/78-127 AC A0A0J8B8M5.1
#=GS A0A7K6JUQ0_9PASE/78-127 AC A0A7K6JUQ0.1
#=GS A0A821S003_9NEOP/78-127 AC A0A821S003.1
#=GS A0A7K5R6M2_9PASE/78-127 AC A0A7K5R6M2.1
#=GS G5C5A6_HETGA/78-127 AC G5C5A6.1
#=GS A0A1N7CU94_9EURY/4-45 AC A0A1N7CU94.1
#=GS A0A399HV60_9PLEO/71-120 AC A0A399HV60.1
#=GS A0A8C4Z759_GADMO/78-127 AC A0A8C4Z759.1
#=GS A0A8C6QRZ7_NANGA/182-231 AC A0A8C6QRZ7.1
#=GS A0A0K0FAI6_STRVS/294-343 AC A0A0K0FAI6.1
#=GS E0W391_PEDHC/78-127 AC E0W391.1
#=GS A0A813N323_9BILA/57-106 AC A0A813N323.1
#=GS A0A1Q3E5S6_LENED/92-141 AC A0A1Q3E5S6.1
#=GS C1E9F1_MICCC/78-98 AC C1E9F1.1
#=GS A0A1U8MDV4_GOSHI/78-105 AC A0A1U8MDV4.1
#=GS D3BHB9_POLPP/77-126 AC D3BHB9.1
#=GS A0A4D9CZ08_9STRA/78-127 AC A0A4D9CZ08.1
#=GS A0A0P0VV52_ORYSJ/1-47 AC A0A0P0VV52.1
#=GS A0A1S3WP22_ERIEU/49-98 AC A0A1S3WP22.1
#=GS A0A2P6RZG7_ROSCH/37-84 AC A0A2P6RZG7.1
#=GS A4S1B1_OSTLU/78-127 AC A4S1B1.1
#=GS A0A1I7W4Z0_LOALO/78-127 AC A0A1I7W4Z0.1
#=GS A5K2R4_PLAVS/78-127 AC A5K2R4.1
#=GS A0A4S4LZV8_9AGAM/78-127 AC A0A4S4LZV8.1
#=GS J3LLQ2_ORYBR/59-108 AC J3LLQ2.1
#=GS A0A6P4CH16_ARADU/78-127 AC A0A6P4CH16.1
#=GS A0A3Q7MMN0_CALUR/78-126 AC A0A3Q7MMN0.1
#=GS A0A836J830_9ROSI/78-127 AC A0A836J830.1
#=GS A0A0E0ETD9_9ORYZ/84-133 AC A0A0E0ETD9.1
#=GS A0A8J5Y6K5_9ROSI/102-151 AC A0A8J5Y6K5.1
#=GS A0A7L3CG11_PELUR/78-127 AC A0A7L3CG11.1
#=GS C4VBC1_NOSCE/74-120 AC C4VBC1.1
#=GS A0A166HSG0_DAUCS/1-41 AC A0A166HSG0.1
#=GS A0A6D2VZN3_PONAB/78-127 AC A0A6D2VZN3.1
#=GS D4GRY0_HALVD/3-44 AC D4GRY0.1
#=GS A0A671LPG1_9TELE/78-127 AC A0A671LPG1.1
#=GS A0A7C8I4L0_9PLEO/103-128 AC A0A7C8I4L0.1
#=GS G1Q4W2_MYOLU/78-126 AC G1Q4W2.1
#=GS A0A7L4ETM9_HIRRU/78-127 AC A0A7L4ETM9.1
#=GS A0A851XR10_EOLRO/68-117 AC A0A851XR10.1
#=GS A0A6A2Y6L4_HIBSY/78-127 AC A0A6A2Y6L4.1
#=GS G3ASW1_SPAPN/2-51 AC G3ASW1.1
#=GS A0A8D2FDK5_THEGE/123-155 AC A0A8D2FDK5.1
#=GS RL40_TOBAC/43-71 AC P19379.1
#=GS A0A2Y9RRG2_TRIMA/78-127 AC A0A2Y9RRG2.1
#=GS A0A7K8ZL44_9PASS/67-116 AC A0A7K8ZL44.1
#=GS A0A4V1XAR9_9PEZI/636-685 AC A0A4V1XAR9.1
#=GS A0A6J3BJ24_VICPA/181-230 AC A0A6J3BJ24.1
#=GS A0A830F2D9_9EURY/9-44 AC A0A830F2D9.1
#=GS A0A835VV17_9CHLO/78-127 AC A0A835VV17.1
#=GS A0A5N6KIH0_MONLA/702-727 AC A0A5N6KIH0.1
#=GS A0A672GCA6_SALFA/78-127 AC A0A672GCA6.1
#=GS A0A1Q6DW83_9EURY/6-45 AC A0A1Q6DW83.1
#=GS A0A1D6DAS8_WHEAT/96-145 AC A0A1D6DAS8.1
#=GS A0A078A7X4_STYLE/83-132 AC A0A078A7X4.1
#=GS A0A0Q3IE72_BRADI/86-134 AC A0A0Q3IE72.1
#=GS A0A0D3H884_9ORYZ/170-219 AC A0A0D3H884.1
#=GS A0A6P3RCQ7_PTEVA/78-122 AC A0A6P3RCQ7.1
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A0A2C6KBF5_9APIC/146-195 ...................IEPSLALLAQKYNC.EKKV...CRK........C.Y...ARLPPRATNCRKK.K.CGHSNQL.RP.KKK-p...........................
A0A287D573_ICTTR/78-121 ..................t-EPFLCQLAQKYNC.DKMI...CRK........-.-...----PRAVNCRRK.K.CGHTNNF.RP.KKKV............................
O42388_CHICK/78-127 ...................IEPSLRQLAQKYNC.DKMI...CRK........C.Y...ARLHPRAVNCRKK.K.CGHTNNL.RP.KKKV............................
#=GC seq_cons ...................IEPSLptLApKYNC.-KMI...CRK........C.Y...ARL.PRAsNCRKK.K.CGHoNpL.RP.KKKl............................
//
