#=GF ID Rop
#=GF AC PF01815.20
#=GF DE Rop protein
#=GF AU Bateman A;0000-0002-6982-4660
#=GF SE PSI-BLAST
#=GF GA 25.00 25.00;
#=GF TC 25.50 25.80;
#=GF NC 21.70 21.40;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch -Z 75585367 --cpu 4 -E 1000 HMM pfamseq
#=GF TP Domain
#=GF RN [1]
#=GF RM 3681971
#=GF RT Structure of the ColE1 rop protein at 1.7 A resolution.
#=GF RA Banner DW, Kokkinidis M, Tsernoglou D;
#=GF RL J Mol Biol 1987;196:657-675.
#=GF RN [2]
#=GF RM 6183660
#=GF RT Control of ColE1 DNA replication: the rop gene product
#=GF RT negatively affects transcription from the replication primer
#=GF RT promoter.
#=GF RA Cesareni G, Muesing MA, Polisky B;
#=GF RL Proc Natl Acad Sci U S A 1982;79:6313-6317.
#=GF DR INTERPRO; IPR000769;
#=GF DR SCOP; 1rpo; fa;
#=GF DR HOMSTRAD; Rop;
#=GF DR SO; 0000417; polypeptide_domain;
#=GF SQ 51
#=GS A0A2A2H1A3_9GAMM/1-57 AC A0A2A2H1A3.1
#=GS A0A553ZT03_9BACI/1-57 AC A0A553ZT03.1
#=GS A0A2S4Y3Z6_9ACTN/1-57 AC A0A2S4Y3Z6.1
#=GS A0A328TUF1_9GAMM/1-47 AC A0A328TUF1.1
#=GS C7HWW4_9FIRM/12-59 AC C7HWW4.1
#=GS A0A0H3GZS9_KLEPH/1-47 AC A0A0H3GZS9.1
#=GS A0A261QLN4_9GAMM/1-57 AC A0A261QLN4.1
#=GS F5LN21_9BACL/1-39 AC F5LN21.1
#=GS A0A6S6RYU7_9GAMM/1-47 AC A0A6S6RYU7.1
#=GS A0A7K3L4W4_9ACTN/1-57 AC A0A7K3L4W4.1
#=GS C4FHH1_9BIFI/12-55 AC C4FHH1.1
#=GS A0A348HIL6_9GAMM/1-57 AC A0A348HIL6.1
#=GS Q9S1E1_YERPE/1-57 AC Q9S1E1.1
#=GS A0A0D4C3I8_9MICC/12-68 AC A0A0D4C3I8.1
#=GS A0A369I4Z7_9BACT/1-57 AC A0A369I4Z7.1
#=GS A0A2A2HI70_9GAMM/1-57 AC A0A2A2HI70.1
#=GS G7YY64_CLOSI/36-92 AC G7YY64.1
#=GS A8ARS0_CITK8/1-57 AC A8ARS0.1
#=GS A0A804HNI2_MUSAM/1-47 AC A0A804HNI2.1
#=GS A0A6G0XSR0_APHCR/1-55 AC A0A6G0XSR0.1
#=GS A0A2A2GXH5_9GAMM/1-34 AC A0A2A2GXH5.1
#=GS B6WQR2_9DELT/12-68 AC B6WQR2.1
#=GS A0A4P7L771_9GAMM/1-57 AC A0A4P7L771.1
#=GS A0A2S4XGV7_9ACTN/1-35 AC A0A2S4XGV7.1
#=GS C0AQF1_9GAMM/12-63 AC C0AQF1.1
#=GS A0A377YZE3_KLEPO/1-57 AC A0A377YZE3.1
#=GS A0A485D6B9_KLUCR/1-40 AC A0A485D6B9.1
#=GS A6TJ66_KLEP7/1-57 AC A6TJ66.1
#=GS A0A0U1QPR4_9BACL/12-68 AC A0A0U1QPR4.1
#=GS A0A485D6L2_KLUCR/26-82 AC A0A485D6L2.1
#=GS A6TJ74_KLEP7/1-57 AC A6TJ74.1
#=GS A0A7Z0WDI0_9PSEU/12-68 AC A0A7Z0WDI0.1
#=GS A0A485D5U5_KLUCR/2-58 AC A0A485D5U5.1
#=GS A0A378QC94_KLEPR/1-57 AC A0A378QC94.1
#=GS A0A2A2GZ16_9GAMM/1-57 AC A0A2A2GZ16.1
#=GS J2X090_KLEPN/4-60 AC J2X090.1
#=GS A0A7X6K835_9MICC/1-57 AC A0A7X6K835.1
#=GS A0A5N5IJM6_9FLAO/1-57 AC A0A5N5IJM6.1
#=GS A0A663AJD6_9ENTR/1-57 AC A0A663AJD6.1
#=GS D1Y0Y1_9BACT/1-54 AC D1Y0Y1.1
#=GS A0A8J3DM16_9HYPH/4-60 AC A0A8J3DM16.1
#=GS A0A4P7L1M5_9GAMM/1-57 AC A0A4P7L1M5.1
#=GS A0A2S4XPU4_9ACTN/1-57 AC A0A2S4XPU4.1
#=GS C5EWV2_9FIRM/12-68 AC C5EWV2.1
#=GS A0A3G9MA66_RHOOP/12-66 AC A0A3G9MA66.1
#=GS A0A663AKM5_9ENTR/1-57 AC A0A663AKM5.1
#=GS A0A4V1BXP7_9GAMM/1-57 AC A0A4V1BXP7.1
#=GS A0A2U8I8J4_9GAMM/1-59 AC A0A2U8I8J4.1
#=GS B9TQF3_RICCO/12-68 AC B9TQF3.1
#=GS A0A848M028_9DELT/1-57 AC A0A848M028.1
#=GS A0A4P7L654_9GAMM/1-57 AC A0A4P7L654.1
A0A2A2H1A3_9GAMM/1-57 ......MTKQELSAMNMAGFIKSQTLILLDKLNQLNLDDCADECEDLHDMAEALYFNLKRTL-e..........
A0A553ZT03_9BACI/1-57 ......MTKQEKTALNMARFIRSQTLTLLEKLNELDADEQADICESLHDHADELYRSCLARFG...........
A0A2S4Y3Z6_9ACTN/1-57 ......MTKQEKTALNMARFIRSQTLTLLEKLNELDADEQADICESLHDHADELYRSCLARFG...........
A0A328TUF1_9GAMM/1-47 ......----------MAKFIQAQSLLLLEKLNELDFDAEADLCETLHEDAEQVFRALALRLD...........
C7HWW4_9FIRM/12-59 ......VTKQEKTALNMARFIRSRTLTLLEKLNELDADEQADICESLHDHADEL---------...........
A0A0H3GZS9_KLEPH/1-47 ......----------MAKFIQNQSLLLLEKLNELDLDAEADLCEKLHDDAEHLFRTLSSRLD...........
A0A261QLN4_9GAMM/1-57 ......MTKQELSALKIAGFIKSQTLLLLDKLDQLDLDSCADECEELHELAEELYLHLKNAL-e..........
F5LN21_9BACL/1-39 ......MTKQEKTALNMARFIRSQTLTLLEKLNELDADEQADICE------------------...........
A0A6S6RYU7_9GAMM/1-47 ......MTKQELTALNMAGFIKSQTLILLDKLNKLNLDDCSD---------------------emsakicttwq
A0A7K3L4W4_9ACTN/1-57 ......MTKQEKTALNMARFIRSQTLTLLEKLNELDADEQADICESLHDHADELYRSCLARFG...........
C4FHH1_9BIFI/12-55 ......VTKQEKTALNMARFIRSQTLTLLEKLNELDADEQADICESLHDH-------------...........
A0A348HIL6_9GAMM/1-57 ......MGKKEKSALNVAKFIKSQTLILLDKLNELDDDDAANACEKLHDDAEALHEVLANK--wa.........
Q9S1E1_YERPE/1-57 ......MNKQQQTALNMARFIRSQSLILLEKLDALDADEQAAMCERLHELAEELQNSIQARFE...........
A0A0D4C3I8_9MICC/12-68 ......VTKQEKTALNMARFIRSQTLTLLEKLNELDADEQADICESLHDHADELYRSCLARFG...........
A0A369I4Z7_9BACT/1-57 ......MTKQEKTALNMARFIRSQTLTLLEKLNELDADEQADICESLHDHADELYRSCLARFG...........
A0A2A2HI70_9GAMM/1-57 ......MNKQELSALNMAGFIKSQTLILLDKLNQLNLDDCADECVDLHYMAEELYFNLKKTL-e..........
G7YY64_CLOSI/36-92 ......VTKQEKTALNMARFIRSQTLTLLEKLNELDADEQADICESLHDHADELYRSCLARFG...........
A8ARS0_CITK8/1-57 ......MTKQEKTALNMAKFIKEQSLLLLDKLNELDMDTPADMCERLHEDAETLWQVMRDKLG...........
A0A804HNI2_MUSAM/1-47 ......----------MARFIRSQTLTLLEKLNELDADEQADICESLHDHADELYRSCLARFG...........
A0A6G0XSR0_APHCR/1-55 ......MNKQELSALNMAGFIKSQTLILF-KLNQLNLYDCADECEDLHDMAENNKQKI-----vath.......
A0A2A2GXH5_9GAMM/1-34 ......-----------------------DKLNQLNLDDCADECVDLHYMAEELYFNLKKTL-e..........
B6WQR2_9DELT/12-68 ......VTKQEKTALNMARFIRSQTLTLLEKLNELDADEQADICESLHDHADELYRSCLARFG...........
A0A4P7L771_9GAMM/1-57 ......MTKQELTALNMAGFIKSQTLILLDKLNQLNLDDCADECEELHDMAEELYLNLKKKLE...........
A0A2S4XGV7_9ACTN/1-35 ......MTKQEKTALNMARFIRSQTLTLLEKLNELDADEQA----------------------...........
C0AQF1_9GAMM/12-63 ......VTKQEKTALNMARFIRSQTLTLLEKLNELDADEQADICESLHDHADELYRSC-----...........
A0A377YZE3_KLEPO/1-57 ......MTKQEKTALNMAKFIKDQSLLLLEKLNELDMDTPADMCERLHEDAETLWQVMRDKLG...........
A0A485D6B9_KLUCR/1-40 ......----------MAKFIQAQSLLLLEKLNELDLDIEADLCEALHEDAEHLF--------s..........
A6TJ66_KLEP7/1-57 ......MTKQQKTALNMAKFIQNQSLLLLEKLNELDLDAEADLCEKLHDDAEHLFRTLSSRLD...........
A0A0U1QPR4_9BACL/12-68 ......VTKQEKTALNMARFIRSQTLTLLEKLNELDADEQADICESLHDHADELYRSCLARFG...........
A0A485D6L2_KLUCR/26-82 ......MTKQQKTALNMAKFIQAQSLLLLEKLNELDLDIEADLCEALHEDAEHLFRSLTTRID...........
A6TJ74_KLEP7/1-57 ......MTKQQKTALNMAKFIQHQSLLLLEKLNELDLDAEADLCEKLHDDAEHLFRTLSSRLD...........
A0A7Z0WDI0_9PSEU/12-68 ......VTKQEKTALNMARFIRSQTLTLLEKLNELDADEQADICESLHDHADELYRSCLARFG...........
A0A485D5U5_KLUCR/2-58 ......MTKQQKTALNMAKFIQAQSLLLLEKLNELDLDIEADLCEALHEDAEHLFRSLTTRID...........
A0A378QC94_KLEPR/1-57 ......MTKQEKTALNMAKFIKDQSLLLLEKLNELDMDTPADMCERLHEDAETLWQVMRDKLG...........
A0A2A2GZ16_9GAMM/1-57 ......MNKQELSALKMAGFIKSQTLIFLDKLNQLNLDDCADECEDLHDMAEALYLNLKRTL-e..........
J2X090_KLEPN/4-60 ......MTKQEKTALNMAKFIKDQSLLLLEKLNELDMDTPADMCERLHEDAETLWQVMRDKLG...........
A0A7X6K835_9MICC/1-57 ......MTKQEKTALNMAKFIKDQSLLLLEKLNELDMDTPADMCERLHEDAETLWQVMRDKLG...........
A0A5N5IJM6_9FLAO/1-57 ......MNKQQQTALNMARFIKSQSLTLLEKLDALDADEQAAMCERLHELAEELQNSIQVRFE...........
A0A663AJD6_9ENTR/1-57 ......MTKQQKTALNMAKFIQNQSLLLLEKLNELDLDAEADLCEKLHDDAEHLFRTLSSRLD...........
D1Y0Y1_9BACT/1-54 ......MTKQEKTALNMARFIRSQTLTLLEKLNELDADEQADICESLHDHADELYRSCLA---...........
A0A8J3DM16_9HYPH/4-60 ......MTKQEKTALNMAKFIKDQSLLLLEKLNELDMDTPADMCERLHEDAETLWQVMRDKLG...........
A0A4P7L1M5_9GAMM/1-57 ......MNKQELSALNMAGFIKSQTLILLDKLNQLNLDDCADECEDLHDMAEELYLNLK----itle.......
A0A2S4XPU4_9ACTN/1-57 ......MTKQEKTALNMARFIRSQTLTLLEKLNELDADEQADICESLHDHADELYRSCLARFG...........
C5EWV2_9FIRM/12-68 ......VTKQEKTALNMARFIRSQTLTLLEKLNELDADEQADICESLHDHADELYRSCLARFG...........
A0A3G9MA66_RHOOP/12-66 ......VTKQEKTALNMARFIRSQTLTLLEKLNELDADEQADICESLHDHADELYRSCLAR--...........
A0A663AKM5_9ENTR/1-57 ......MTKQQKTALNMAKFIQNQSLLLLEKLNELDLDVEADLCEKLHDDAEHLFRTLSSRLD...........
A0A4V1BXP7_9GAMM/1-57 ......MTKQELTALNIAGFIKSQTLILLDKLNQLNLDDCADECEDLYDMAEELYLNLKKTL-e..........
A0A2U8I8J4_9GAMM/1-59 makksl----EQTTANMAKFLQDQSLSLLEKLDILDQDELADECQELHELAEALHQKIRKKYG...........
B9TQF3_RICCO/12-68 ......VTKQEKTALNMARFIRSQTLTLLEKLNELDADEQADICESLHDHADELYRSCLARFG...........
A0A848M028_9DELT/1-57 ......MTKQQKTALNMAKFIQNQSLLLLEKLNELDLDVEADLCEKLHDDAEHLFRTLSSRLD...........
A0A4P7L654_9GAMM/1-57 ......MTKQELTALNMAGFIKSQTLILLDKLNQLNLDDCADECEELHDMAEALYLNLKRTL-e..........
#=GC seq_cons ......MTKQEKTALNMA+FI+SQTLhLLEKLNELDhD-pADhCEpLHDcA-cLapshhs+ht...........
//
