#=GF ID   Rubi_NSP_C
#=GF AC   PF12601.12
#=GF DE   Rubivirus non-structural protein
#=GF AU   Gavin OL;
#=GF SE   Prosite
#=GF GA   25.40 25.40;
#=GF TC   25.50 29.00;
#=GF NC   22.90 25.30;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   10846076
#=GF RT   Characterization of the zinc binding activity of the rubella
#=GF RT   virus nonstructural protease. 
#=GF RA   Liu X, Yang J, Ghazi AM, Frey TK; 
#=GF RL   J Virol 2000;74:5949-5956.
#=GF DR   INTERPRO; IPR022245;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This domain family is found in viruses, and is approximately 70
#=GF CC   amino acids in length. The family is found in association with
#=GF CC   Pfam:PF05407. The rubella virus (RUB) nonstructural (NS) protein
#=GF CC   (NSP) ORF encodes a protease that cleaves the NSP precursor (240
#=GF CC   kDa) at a single site to produce two products.
#=GF SQ   4
#=GS A0A7L5KVN2_9VIRU/1104-1147  AC A0A7L5KVN2.1
#=GS POLN_RUBVM/1275-1340        AC Q86500.2
#=GS G3M8I0_RUBV/1275-1340       AC G3M8I0.1
#=GS POLN_RUBVT/1275-1340        AC P13889.5
A0A7L5KVN2_9VIRU/1104-1147             sahnagspgdrelr------------------------------------WAQAYWDDLELRRLGEDRLAAAALRSCPRP
POLN_RUBVM/1275-1340                   ..............VCAVGGGPRRVSDRPHLWLAVPLSRGGGTCAATDEGLAQAYYDDLEVRRLGDDAMARAALASIQRP
G3M8I0_RUBV/1275-1340                  ..............VCAVGGGPRRVSDRPHLWLAVPLSRGGGTCAATDEGLAQAYYDDLEVRRLGDDAMARAALAAVQRP
POLN_RUBVT/1275-1340                   ..............VCAVGGGPRRVSDRPHLWLAVPLSRGGGTCAATDEGLAQAYYDDLEVRRLGDDAMARAALASVQRP
#=GC seq_cons                          ..............VCAVGGGPRRVSDRPHLWLAVPLSRGGGTCAATDEGLAQAYYDDLEVRRLGDDAMARAALASlQRP
//