LinkDB: SepRS_C
Original site: SepRS_C
Gene (758) KEGG GENES (758) Protein sequence (495) UniProt (475) SWISS-PROT (20) Protein domain (2) InterPro (1) NCBI-CDD (1) All databases (1255)
Download RDF
#=GF ID SepRS_C #=GF AC PF18006.5 #=GF DE O-phosphoseryl-tRNA synthetase C-terminal domain #=GF AU El-Gebali S;0000-0003-1378-5495 #=GF AU Smart A;0000-0002-6965-5633 #=GF SE ECOD:EUF01344 #=GF GA 26.90 26.90; #=GF TC 27.60 28.50; #=GF NC 26.40 26.80; #=GF BM hmmbuild HMM.ann SEED.ann #=GF SM hmmsearch --cpu 4 -E 1000 -Z 75585367 HMM pfamseq #=GF TP Domain #=GF RN [1] #=GF RM 17301225 #=GF RT Toward understanding phosphoseryl-tRNACys formation: the crystal #=GF RT structure of Methanococcus maripaludis phosphoseryl-tRNA #=GF RT synthetase. #=GF RA Kamtekar S, Hohn MJ, Park HS, Schnitzbauer M, Sauerwald A, Soll #=GF RA D, Steitz TA; #=GF RL Proc Natl Acad Sci U S A. 2007;104:2620-2625. #=GF RN [2] #=GF RM 17351629 #=GF RT Structural insights into the first step of RNA-dependent #=GF RT cysteine biosynthesis in archaea. #=GF RA Fukunaga R, Yokoyama S; #=GF RL Nat Struct Mol Biol. 2007;14:272-279. #=GF DR INTERPRO; IPR041590; #=GF DR SO; 0000417; polypeptide_domain; #=GF CC The SSHS domain is mainly found in Archaea. The domain makes up #=GF CC part of the anticodon binding domain at the C-terminal of #=GF CC O-phosphoserine--tRNA(Cys) ligase [1,2]. #=GF SQ 60 #=GS D3RXA4_FERPA/422-452 AC D3RXA4.1 #=GS A0A8J7YAH8_9EURY/427-467 AC A0A8J7YAH8.1 #=GS SEPS_METAR/434-465 AC Q0W0T4.1 #=GS SEPS_METBU/436-467 AC Q12XG0.1 #=GS A0A0E3P0C1_9EURY/436-467 AC A0A0E3P0C1.1 #=GS SEPS_METMP/426-465 AC Q6LZE1.1 #=GS A0A133VBG6_9EURY/419-454 AC A0A133VBG6.1 #=GS D1YYK7_METPS/434-465 AC D1YYK7.1 #=GS G7WLJ6_METH6/435-465 AC G7WLJ6.1 #=GS D7EB42_METEZ/436-467 AC D7EB42.1 #=GS A0A133V1E1_9EURY/419-454 AC A0A133V1E1.1 #=GS A0A1F2P3R4_9EURY/421-451 AC A0A1F2P3R4.1 #=GS A0A0X3BLS4_9EURY/425-455 AC A0A0X3BLS4.1 #=GS A0A133V7G2_9EURY/419-454 AC A0A133V7G2.1 #=GS A0A4E0PY78_9EURY/436-467 AC A0A4E0PY78.1 #=GS A0A328PGK1_9EURY/424-459 AC A0A328PGK1.1 #=GS SEPS_METB6/448-478 AC A7I4Y4.1 #=GS A0A2V3JGI6_9EURY/434-464 AC A0A2V3JGI6.1 #=GS A0A1F2PC36_9EURY/430-460 AC A0A1F2PC36.1 #=GS W9DPQ7_METTI/436-467 AC W9DPQ7.1 #=GS SEPS_METPE/425-455 AC B8GJL9.1 #=GS H1YX22_9EURY/426-456 AC H1YX22.1 #=GS SEPS_METJA/428-467 AC Q59054.2 #=GS F2KT87_ARCVS/435-465 AC F2KT87.1 #=GS E1RI03_METP4/426-456 AC E1RI03.1 #=GS SEPS_METTP/435-465 AC A0B632.1 #=GS A0A8J7RFL3_9EURY/425-455 AC A0A8J7RFL3.1 #=GS E3GXW3_METFV/421-455 AC E3GXW3.1 #=GS A0A133VCJ2_9EURY/419-454 AC A0A133VCJ2.1 #=GS F7XL66_METZD/436-467 AC F7XL66.1 #=GS D2RE16_ARCPA/431-461 AC D2RE16.1 #=GS A0A133UKR6_9EURY/420-455 AC A0A133UKR6.1 #=GS SEPS_METLZ/425-455 AC A2SQV5.1 #=GS N0BDQ3_9EURY/435-465 AC N0BDQ3.1 #=GS A0A133VA36_9EURY/361-396 AC A0A133VA36.1 #=GS A0A2V2N8Q1_9EURY/424-454 AC A0A2V2N8Q1.1 #=GS A0A8J7W9C0_9EURY/425-455 AC A0A8J7W9C0.1 #=GS I7KZM7_METBM/425-455 AC I7KZM7.1 #=GS SEPS_ARCFU/432-462 AC O30126.1 #=GS SEPS_META3/428-467 AC A6UVW6.1 #=GS A0A483CZC4_9EURY/431-461 AC A0A483CZC4.1 #=GS A0A2V3JDQ7_9EURY/428-458 AC A0A2V3JDQ7.1 #=GS SEPS_METMA/436-467 AC Q8PX39.1 #=GS D7DSI3_METV3/451-490 AC D7DSI3.1 #=GS D5EAK9_METMS/436-467 AC D5EAK9.1 #=GS L0KTS1_METHD/436-467 AC L0KTS1.1 #=GS A0A8J7N9P1_9ARCH/423-456 AC A0A8J7N9P1.1 #=GS A0A498H1W1_9EURY/425-455 AC A0A498H1W1.1 #=GS A0A062V1I9_9EURY/436-466 AC A0A062V1I9.1 #=GS SEPS_METAC/436-467 AC Q8TUH7.1 #=GS SEPS_METTH/424-459 AC O27545.1 #=GS A0A133UBB0_9EURY/419-454 AC A0A133UBB0.1 #=GS F4BTP8_METSG/435-465 AC F4BTP8.1 #=GS A0A484F4F3_9EURY/436-467 AC A0A484F4F3.1 #=GS L0HJ71_METFS/425-455 AC L0HJ71.1 #=GS A0A133USS5_9EURY/420-455 AC A0A133USS5.1 #=GS F6BET4_METIK/427-466 AC F6BET4.1 #=GS A0A656YXK8_9EURY/420-455 AC A0A656YXK8.1 #=GS A0A0F7IDV0_9EURY/428-458 AC A0A0F7IDV0.1 #=GS SEPS_METHJ/425-455 AC Q2FSR2.1 D3RXA4_FERPA/422-452 NELVVYNGSIYGIP.KTDEWLE.........YFEN.GVETGI... A0A8J7YAH8_9EURY/427-467 NKIYVYDGNILGIPeSNEGIKEehymellkeARNH.GVSTEI... SEPS_METAR/434-465 NEAYVYKGDLLGIPlNNPKFAE.........VAEK.GAPTGI... SEPS_METBU/436-467 NEVLVHENDVLGLP.NNKKWKK.........AFENhSARTGV... A0A0E3P0C1_9EURY/436-467 NEVVAYNGDILGLP.NTKKWKK.........AFENhSAMAGI... SEPS_METMP/426-465 NEIYVYDGNVIGIPeSFDGVKEefkd.flekGKSE.GVATGI... A0A133VBG6_9EURY/419-454 NEIYIYDGNVIGVP.-PEGWKEdef...lkkVREK.GISTGI... D1YYK7_METPS/434-465 NEVYVYKGDVLGIPlNNPKFQE.........VQNK.GVHVGI... G7WLJ6_METH6/435-465 NEVLVYKENILGVP.KTSKWED.........AFEN.GVTTG-m.. D7EB42_METEZ/436-467 NEVVAYYNDILGIP.NNKKWQK.........AFENdSARTGI... A0A133V1E1_9EURY/419-454 NEIYVYDGNIVGVP.-PEGWEEykf...lkkARDN.GINTGI... A0A1F2P3R4_9EURY/421-451 NEIVVHKGNILGIP.RTDRWRK.........AFDE.GVSTGI... A0A0X3BLS4_9EURY/425-455 NEVFVHNGAVLGVP.DLPKWAE.........VRRD.GVSTGI... A0A133V7G2_9EURY/419-454 NEIYVYDGNIVGVP.-PEGWEEykf...lkkARDN.GINTGI... A0A4E0PY78_9EURY/436-467 NEIVVFNNDILGIP.DNKKWKE.........ALENhSARTG-l.. A0A328PGK1_9EURY/424-459 NRIFIYDGNILGVP.EEEKLDTkl....ikeARKK.GIDTGI... SEPS_METB6/448-478 NEIFVHEGNILGVP.DNEKWKD.........VRIK.GIPTGI... A0A2V3JGI6_9EURY/434-464 NEVMVHDGNVLGVP.RIEKWDS.........VFAE.GISAG-f.. A0A1F2PC36_9EURY/430-460 NEIIVHDGNIYGIP.RIDRWKK.........IFDE.GVSTGI... W9DPQ7_METTI/436-467 NEIVAYENDVLGVP.DNKKWKK.........VLENhSARTGV... SEPS_METPE/425-455 NEIFVYQGSVLGVP.DADKWQT.........VRTD.GVSTGI... H1YX22_9EURY/426-456 NEIFISDGKVLGVP.DTKSFKK.........VRDK.GVN---syi SEPS_METJA/428-467 NEVYVYDGNIYGIPpTFEGVKEqyip.ilkkAKEE.GVSTNI... F2KT87_ARCVS/435-465 NEVVVYQGSVYGVP.RTEKWSE.........YFEK.GISTG-m.. E1RI03_METP4/426-456 NDVFVSEGKILGVP.DTSNFRK.........VRDK.GVSAGI... SEPS_METTP/435-465 NEIVVYRNEILGIP.RTPKWEA.........AFEE.GVQTGI... A0A8J7RFL3_9EURY/425-455 NEVYVQDGKVLGVP.NTPQFGK.........VRKK.GTPA--hi. E3GXW3_METFV/421-455 NQVYVYDGNIVGVP.-KKGVKSpl....aekAKKN.GINTNI... A0A133VCJ2_9EURY/419-454 NEIYVYDGNIVGVP.-PEGWEEykf...lkkARDN.GINTGI... F7XL66_METZD/436-467 NEIVVFENDILGLP.RSKKWAR.........AFENnASCTGI... D2RE16_ARCPA/431-461 NEIVVYKNSVYGIP.RNEKFKE.........YFEN.GIPTGI... A0A133UKR6_9EURY/420-455 NQIYVNEGNIIGVP.-SEGWEDdef...lqkARKK.GTPTGI... SEPS_METLZ/425-455 NEVYVRKGAVLGVP.DTEKFAD.........VKAE.GVPVGI... N0BDQ3_9EURY/435-465 NEVVVYQGSILGVP.RTDKWLH.........VFEH.GFTTGI... A0A133VA36_9EURY/361-396 NEIYVYDGNIVGVP.-PEGWEEykf...lkkARDN.GINTGI... A0A2V2N8Q1_9EURY/424-454 NEIFVQNGSILGVP.DTEKFAT.........VRKE.GVPAG-l.. A0A8J7W9C0_9EURY/425-455 NEIFIHEGAILGVP.DTEKFAN.........IRAN.GTPTGI... I7KZM7_METBM/425-455 NEVFVHNGAVLGVP.DLPKWAE.........VRRD.GVSTGI... SEPS_ARCFU/432-462 NEVVVYKGDIYGIP.KTKKWRS.........FFEE.GVPTGI... SEPS_META3/428-467 NKIFVHNGNIFGVPeSFDNVKEefvk.vlseAKNK.GAPTN-l.. A0A483CZC4_9EURY/431-461 NEVFVQDGRVLGVP.DTEKFAD.........VRAN.GAPTGI... A0A2V3JDQ7_9EURY/428-458 NEIVVHEGSILAIP.RTARWES.........VFET.CVSTNI... SEPS_METMA/436-467 NEVVAYQGDILGIP.NNKKWQK.........AFENhSARAGI... D7DSI3_METV3/451-490 NEIYVYDGNIIGIPeSFDGVKEefke.flqnGKDN.GVNTNI... D5EAK9_METMS/436-467 NEIVIYNNDILGLP.DNKKWKK.........AFSNhSARTGV... L0KTS1_METHD/436-467 NEVLTFKSDILGLP.NNKKWEE.........AFENdSARTGI... A0A8J7N9P1_9ARCH/423-456 NEIYVHNGGIYGLP.-KEGFKDka.....kgIQEK.GINTK-i.. A0A498H1W1_9EURY/425-455 NEVFVHNGAVLGVP.DVEKWAQ.........VRSE.GVSTGI... A0A062V1I9_9EURY/436-466 NEIISYKNDVLGLP.RIPRWDD.........AFRN.GVSTGI... SEPS_METAC/436-467 NEVVTYQGDILGIP.NTKKWQK.........AFENhSAMAGI... SEPS_METTH/424-459 NTVYIHDGNILGVPpGTELDSEli.....trARKE.GLNTGI... A0A133UBB0_9EURY/419-454 NQIYVMDGNIIGVP.-PEGWEEndf...lqkARVE.GVSTGI... F4BTP8_METSG/435-465 NEIVVHKQNVMGIP.RTSRWEE.........AFNE.GVSTGI... A0A484F4F3_9EURY/436-467 NEVVAYNGDLLGVP.NQKKWEK.........ALENhSARTG-f.. L0HJ71_METFS/425-455 NEIFVHDGSVLGVP.DAEKWKQ.........VRIE.GVPIG-l.. A0A133USS5_9EURY/420-455 NQIYVNEGNIIGVP.-SEGWEDdef...lqkARKK.GTPTGI... F6BET4_METIK/427-466 NEVYVYDSNVYGIPqSFEGVKKeyvd.ilkkAKEE.GVPTGI... A0A656YXK8_9EURY/420-455 NQIYVNEGNIIGVP.-SEGWEDdef...lqkARKK.GTPTGI... A0A0F7IDV0_9EURY/428-458 NEIVVHDGNIYGVP.RSERFAR.........YFEN.GVATGV... SEPS_METHJ/425-455 NEIFVHKGAILGVP.DTEKFAE.........VRKN.GISTGI... #=GC seq_cons NElhVacGsILGlP.psc+Wcc.........shcp.GlsTGI... //