GenomeNet

Database: Pfam
Entry: SopE_GEF
LinkDB: SopE_GEF
Original site: SopE_GEF 
#=GF ID   SopE_GEF
#=GF AC   PF07487.17
#=GF DE   SopE GEF domain
#=GF AU   Finn RD;0000-0001-8626-2148
#=GF AU   Moxon SJ;0000-0003-4644-1816
#=GF SE   Pfam-B_18665 (release 7.8)
#=GF GA   25.00 25.00;
#=GF TC   25.70 26.00;
#=GF NC   24.60 24.00;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -Z 75585367 -E 1000 HMM pfamseq
#=GF TP   Domain
#=GF RN   [1]
#=GF RM   12093730
#=GF RT   Structural basis for the reversible activation of a Rho protein
#=GF RT   by the bacterial toxin SopE. 
#=GF RA   Buchwald G, Friebel A, Galan JE, Hardt WD, Wittinghofer A,
#=GF RA   Scheffzek K; 
#=GF RL   EMBO J 2002;21:3286-3295.
#=GF DR   INTERPRO; IPR016019;
#=GF DR   SCOP; 1gzs; fa;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This family represents the C-terminal guanine nucleotide
#=GF CC   exchange factor (GEF) domain of SopE. Salmonella typhimurium
#=GF CC   employs a type III secretion system to inject bacterial toxins
#=GF CC   into the host cell cytosol. These toxins transiently activate
#=GF CC   Rho family GTP-binding protein-dependent signaling cascades to
#=GF CC   induce cytoskeletal rearrangements. SopE, can activate Cdc42, an
#=GF CC   essential component of the host cellular signaling cascade, in a
#=GF CC   Dbl-like fashion despite its lack of sequence similarity to
#=GF CC   Dbl-like proteins, the Rho-specific eukaryotic guanine
#=GF CC   nucleotide exchange factors [1].
#=GF SQ   17
#=GS A0A509D3H2_9ENTR/11-80    AC A0A509D3H2.1
#=GS A0A8J7H008_9ENTR/124-185  AC A0A8J7H008.1
#=GS A9MNG9_SALAR/103-238      AC A9MNG9.1
#=GS A0A0N1J5N7_9PSED/89-226   AC A0A0N1J5N7.1
#=GS Q7P1B7_CHRVO/107-240      AC Q7P1B7.1
#=GS A0A4Z0PIE8_SALET/103-225  AC A0A4Z0PIE8.1
#=GS A0A2G3K6S2_9BURK/148-294  AC A0A2G3K6S2.1
#=GS A0A2X4T8T3_SALER/103-238  AC A0A2X4T8T3.1
#=GS A0A8J7GUR8_9ENTR/399-505  AC A0A8J7GUR8.1
#=GS A0A656YHN9_SALNE/27-162   AC A0A656YHN9.1
#=GS C4K8Y0_HAMD5/331-475      AC C4K8Y0.1
#=GS A0A8J7KR15_9ENTR/166-215  AC A0A8J7KR15.1
#=GS A0A447M3A7_SALBN/3-80     AC A0A447M3A7.1
#=GS SOPE2_SALTY/103-238       AC Q7CQD4.3
#=GS BOPE_BURPS/107-243        AC Q63K41.1
#=GS A0A839VX08_9BURK/49-183   AC A0A839VX08.1
#=GS A0A4R1NMY8_9GAMM/123-262  AC A0A4R1NMY8.1
A0A509D3H2_9ENTR/11-80               ..............ktri----....RSQTREAILSAVYSKNKDQCCKLL.....I....SK....G.INIAP.FLKEIGEAAQNAGLPGAT..K..ND....VFTPSGA..GANPL--------..------------------....----------------------------------------..........
A0A8J7H008_9ENTR/124-185             .............dkrgf----....-EQLVEATMASAYSEASDAMTAYC.....Q....RI....G.QPVPKgYVHEIGMASMENGLKCAD..K..H-....-------..-------------..------------------....----------------------------------------agkn......
A9MNG9_SALAR/103-238                 ..................DPDY....ARQTCEAMLSSVYSNNKDQCCKLL.....V....SK....G.ISITP.FLKEIGEAAQNAGLPGEI..K..NG....IFTPGGA..GTNPFVVPLIASA..SVEYPHMFINYSQQVSFK....AYAEKIIMKEVTPLFNEGTMPTPQQFQLTVENIANKYLQN..........
A0A0N1J5N7_9PSED/89-226              ..dpknreelvagcftli----....----------------HDNCEK-L.....V....DKqkmpS.DQALS.FKQQLGRLAWKVGLPGEA.nK..QG....VFVPRGAgsGANPLLNPLKDLI..LREHAHIFKHPVLREKIF....AMAEKKIIAFVSDHMNPEESKRLDCFQHERALLEKQWRN-d.........
Q7P1B7_CHRVO/107-240                 ..................DPVY....RRQALESTYATIYSEAKQAFYR--.....A....NG....G.KMPEG.YLRELGEAARAAGLPGEN..K..HG....VFIPSGD..GASPFVNYLLIPV..QKEFGHRLRNESQQRLFR....DFARQLSMELVAPHAAERGWEPPAAFAARLEAVGRPWLAQ..........
A0A4Z0PIE8_SALET/103-225             ..................DPAY....ARQTCEAILAAVYSNNKDQCCKLL.....I....SK....G.ISITP.FLKEIGEAAQNAGLPGEM..K..NG....VFTPGGA..GANPFVVPLIAAA..SIKYPHMFINHNQQVSFK....AHAEKIVMKEVTPLFNKGTMPTPQQFQ-------------..........
A0A2G3K6S2_9BURK/148-294             .............nenii----....-KQYYNAIYASIYSDVKDRIGKSY.....V...gTG....M.KTPNK.AWEEIGLVAKEIGLDGGEetKieNNvetiIFTPKAA..GANPLITQILTPVsmDKRYGPHMTRPEQQREYR....EYAKNLAIEQIRSFALQDGWPDPSEFEARLTEIEKKWQ--fn........
A0A2X4T8T3_SALER/103-238             ..................DPDY....ARQTCEAMLSSVYSNNKDQCCKLL.....V....SK....G.ISITP.FLKEIGEAAQNAGLPGEI..K..NG....IFTPGGA..GTNPFVVPLIASA..SVEYPHMFINYSQQVSFK....AYAEKIIMKEVTPLFNEGTMPTPQQFQLTVENIANKYLQN..........
A0A8J7GUR8_9ENTR/399-505             vlsaaaqiayhkglcdgi----....------------------------.....-....--....-.--RNS.YLHTIGSAAQDAGLSGNTphR..DK....AFTPTGA..GANPYIRPTLDAV..TQHYPDALMNPEIKDQLS....KHAHHQLMAEIDTLSK------------------------hlkpklesl.
A0A656YHN9_SALNE/27-162              ..................DPAY....ASQTREAILSAVYSKNKDQCCNLL.....I....SK....G.INIAP.FLQEIGEAAENAGLPGTT..K..ND....VFTPSGA..GANPFITPLISSA..NSKYPRMFINQHQQASFK....IYAEKIIMTEVAPLFNECAMPTPQQFQLILENIANKYIQ-y.........
C4K8Y0_HAMD5/331-475                 ..................EAKYnqttRNQLIDAGLASVYAQKIDDFKKKY.....G....ES....S.ETGQK.FLFEIGKVCKENGVKCTQ.nK..NG....TWVVNGA..GAHPVIYPISQNI..FTKFKMHLKLSNNKTKMYdksiSYITNKVYKKTDELCKQENRITTSDLRSLLDDVEKKVLD-g.........
A0A8J7KR15_9ENTR/166-215             ..................DTHY....DSQAIDSALCAIYSNHKDTFLKRL.....E....HS....A.KPVQNkLL----------------..-..--....-------..-------------..------------------....----------------------------------------stlpadtqqs
A0A447M3A7_SALBN/3-80                ...............clp----....------------------------.....-....--....-.-----.------------------..-..--....---PGGA..GANPFITPLVSSA..SIKYPYTFINHNQQTSFK....AYAEKLIMEEVTPLFKEQNLPTPQQFHLTLENIASKYIQN..........
SOPE2_SALTY/103-238                  ..................DPAY....ARQTCEAILSAVYSNNKDQCCKLL.....I....SK....G.VSITP.FLKEIGEAAQNAGLPGEI..K..NG....VFTPGGA..GANPFVVPLIASA..SIKYPHMFINHNQQVSFK....AYAEKIVMKEVTPLFNKGTMPTPQQFQLTIENIANKYLQN..........
BOPE_BURPS/107-243                   ..................DAEF....GRQVYEATLCAIFSEAKDRFCMDP.....A....TR....A.GNVRPaFIEALGDAARATGLPGAD..K..QG....VFTPSGA..GTNPLYTEIRLRA..DTLMGAELAARPEYRELQ....PYARQQAIDLVANALPAERSNTLVEFRQTVQTLEATYRR-a.........
A0A839VX08_9BURK/49-183              .............dkeat----....-VQMVDSLFCSVYFSRKNEFDHLN.....T....EL....GyKTPSD.YLRDIGQAAKEMGVLCGE..K..DD....YLVPNGA..GADIFTNIFISEI..LKTMPGQNGQPCDPTKYQ....RIAKNIAFNVVADLTGERTR--VEAFSNKLAVLANKY---apg.......
A0A4R1NMY8_9GAMM/123-262             ..................DEKY....KEQVIDAIFSAMYRDVKTSFKIHYfhnkpGvlgeNE....S.SLPRE.YLKTMGQAAYDWGVACYE..K..EG....IYFPKGE..GANPLLNAVLSIL..QKNNPIATR---DQKNIE....RINRE-INVMVDAYCTAHGLKSPVAFESALIDINKNW---ql........
#=GC seq_cons                        ..........................tpQhh-AhhuulYSpsKDphp+hh.....h....sp....u.hshps.aLc-IGpAAppsGLsGtt..K..ps....lFsPsGA..GANPhls.lls.h..phcashhhhp.ppphphp....taAcphhhp.Vsshhtttsh.ssttFp.hlt.ltppa.............
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