#=GF ID   TBPIP_C
#=GF AC   PF21664.1
#=GF DE   TBP-interacting protein, C-terminal domain
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF AU   Chuguransky S;0000-0002-0520-0736
#=GF SE   ECOD:EF16465
#=GF GA   27.20 27.20;
#=GF TC   27.20 207.80;
#=GF NC   27.10 23.00;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF RC   Paper describing PDB structure 2czr
#=GF RN   [1]
#=GF RM   16322571
#=GF RT   Crystal structure of TBP-interacting protein (Tk-TIP26) and
#=GF RT   implications for its  inhibition mechanism of the interaction
#=GF RT   between TBP and TATA-DNA.
#=GF RA   Yamamoto T, Matsuda T, Inoue T, Matsumura H, Morikawa M, Kanaya
#=GF RA   S, Kai Y;
#=GF RL   Protein Sci. 2006;15:152-161.
#=GF RC   Paper describing PDB structure 2i13
#=GF RN   [2]
#=GF RM   16963084
#=GF RT   Structure of Aart, a designed six-finger zinc finger peptide,
#=GF RT   bound to DNA.
#=GF RA   Segal DJ, Crotty JW, Bhakta MS, Barbas CF 3rd, Horton NC;
#=GF RL   J Mol Biol. 2006;363:405-421.
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This entry represents the C-terminal domain of archaeal
#=GF CC   TATA-binding protein (TBP)-interacting proteins (TBPIPs). This
#=GF CC   domain contains two Cys and two His which coordinates a zinc
#=GF CC   ion. It forms an unusual Cys2His2-type zinc finger, not
#=GF CC   functional as a DNA-binding module [1,2].
#=GF SQ   4
#=GS Q9V2W6_THEKO/101-215  AC Q9V2W6.1
#=GS F0LJK3_THEBM/103-217  AC F0LJK3.1
#=GS C6A1R0_THESM/103-217  AC C6A1R0.1
#=GS Q8U365_PYRFU/103-217  AC Q8U365.1
Q9V2W6_THEKO/101-215             VWSGFKVVEDNGKLVQEDVYEYLGAALVNHIKNNALAGQDYIFWQFYKCEECGKYVDIENLEAHLREHGIKLHEKSEEHYEVFELNFREGKVFDKFGGEVPMDKFSSEAREFIKE
F0LJK3_THEBM/103-217             VWRGFKVVEQDGKLMQEDFYEYLGGRFIEHLKNNMTIGQDFVFWQFYKCEKCGKYVDIDSVRSHLKEHGIKIEDKDEMMYEVFEISIIDGKVYDKFGKEVKEDKLSEEAKDFIKE
C6A1R0_THESM/103-217             VWSGFRVIERDGRLVQEDTYEYLGGPLIRHLKSNMMNGQDYVFWQFYKCEKCGKYIDIESVPEHLAKHNISVAKKDSEEYEIFELNFLEGKIFNKFGEEVSQNKFAPEAQTFLKE
Q8U365_PYRFU/103-217             VWAGFKVVERDGALEQEDIYEYLGGRLIEHIKSGMVNGKDYIFWQFYKCEHCGKYVDIENLVRHMKTHGEDVKEWSEEKYEVLELSFEDKKVYNKFGKEVPLEEFVEETQDFIKE
#=GC seq_cons                    VWuGFKVVEcDG+LhQEDhYEYLGGtLIcHlKsNMhsGQDYlFWQFYKCE+CGKYVDIEsl.pHL+cHGIclc-KsEEcYEVFELsFh-GKVasKFGcEVs.-KFupEAp-FIKE
//