#=GF ID Terminase_3
#=GF AC PF04466.17
#=GF DE Phage terminase large subunit
#=GF PI G2P;
#=GF AU Waterfield DI;0000-0003-2885-5126
#=GF AU Finn RD;0000-0001-8626-2148
#=GF SE COG1783
#=GF GA 23.20 23.20;
#=GF TC 23.20 23.20;
#=GF NC 23.10 23.10;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch -Z 75585367 -E 1000 --cpu 4 HMM pfamseq
#=GF TP Domain
#=GF CL CL0023
#=GF RN [1]
#=GF RM 10930407
#=GF RT Functional analysis of the terminase large subunit, G2P, of
#=GF RT Bacillus subtilis bacteriophage SPP1.
#=GF RA Gual A, Camacho AG, Alonso JC;
#=GF RL J Biol Chem 2000;275:35311-35319.
#=GF RN [2]
#=GF RM 1548711
#=GF RT Molecular analysis of the Bacillus subtilis bacteriophage SPP1
#=GF RT region encompassing genes 1 to 6. The products of gene 1 and
#=GF RT gene 2 are required for pac cleavage.
#=GF RA Chai S, Bravo A, Luder G, Nedlin A, Trautner TA, Alonso JC;
#=GF RL J Mol Biol 1992;224:87-102.
#=GF DR INTERPRO; IPR035412;
#=GF DR SO; 0000417; polypeptide_domain;
#=GF CC Initiation of packaging of double-stranded viral DNA involves
#=GF CC the specific interaction of the prohead with viral DNA in a
#=GF CC process mediated by a phage-encoded terminase protein. The
#=GF CC terminase enzymes are usually hetero-oligomers composed of a
#=GF CC small and a large subunit. This region is found on the large
#=GF CC subunit and possess an endonuclease and ATPase activity that
#=GF CC require Mg2+ and a neutral or slightly basic reaction. This
#=GF CC region is also found in bacterial sequences [1,2].
#=GF SQ 1393
#=GS A0A4D6ATU0_9CAUD/20-231 AC A0A4D6ATU0.1
#=GS A0A4P7LA73_9GAMM/20-219 AC A0A4P7LA73.1
#=GS R2S1K3_9ENTE/28-235 AC R2S1K3.1
#=GS A0A873WFR9_9CAUD/21-219 AC A0A873WFR9.1
#=GS C4K6U5_HAMD5/4-206 AC C4K6U5.1
#=GS B2IFS2_BEII9/19-224 AC B2IFS2.1
#=GS A0A0P9DPY3_9CHLR/29-222 AC A0A0P9DPY3.1
#=GS A0A139ZPE0_9CAUD/23-231 AC A0A139ZPE0.1
#=GS E8ZD45_9CAUD/31-238 AC E8ZD45.1
#=GS A0A415DHX6_9BACT/16-237 AC A0A415DHX6.1
#=GS A0A6B9LGC3_9CAUD/24-203 AC A0A6B9LGC3.1
#=GS A0A1G8XYA9_9SPHI/19-221 AC A0A1G8XYA9.1
#=GS A0A3G8F3G4_9CAUD/75-277 AC A0A3G8F3G4.1
#=GS A0A6M3T7N8_9CAUD/27-244 AC A0A6M3T7N8.1
#=GS A0A088F6U9_9CAUD/19-218 AC A0A088F6U9.1
#=GS A0A069CX01_WEIOS/23-228 AC A0A069CX01.1
#=GS A0A4D6BA55_9CAUD/32-239 AC A0A4D6BA55.1
#=GS A0A073JKP2_9RHOB/100-271 AC A0A073JKP2.1
#=GS A0A6C0R1M5_9CAUD/75-277 AC A0A6C0R1M5.1
#=GS A0A7T3N960_9CAUD/20-211 AC A0A7T3N960.1
#=GS A0A559IW67_9BACL/26-228 AC A0A559IW67.1
#=GS M4SMA8_9CAUD/20-211 AC M4SMA8.1
#=GS A0A4D6A9U7_9CAUD/20-231 AC A0A4D6A9U7.1
#=GS A0A4D6AWV1_9CAUD/31-238 AC A0A4D6AWV1.1
#=GS A0A6B7H7H7_9CAUD/27-157 AC A0A6B7H7H7.1
#=GS B5LPR0_9CAUD/22-230 AC B5LPR0.1
#=GS A0A374VA13_9BACE/84-222 AC A0A374VA13.1
#=GS A0A2T0B1P1_9CLOT/46-237 AC A0A2T0B1P1.1
#=GS L0EUV6_LIBCB/19-119 AC L0EUV6.1
#=GS X4ZFB7_9BACL/30-233 AC X4ZFB7.1
#=GS A0A495KGN8_9FLAO/62-238 AC A0A495KGN8.1
#=GS A0A7U0GDT3_9CAUD/26-232 AC A0A7U0GDT3.1
#=GS C0DAJ3_9FIRM/1-133 AC C0DAJ3.1
#=GS C0XGR9_LENH9/10-237 AC C0XGR9.1
#=GS A0A5B9NKR6_9CAUD/26-232 AC A0A5B9NKR6.1
#=GS Q4ZC75_9CAUD/27-232 AC Q4ZC75.1
#=GS A0A1H6CSE4_9SPHI/18-224 AC A0A1H6CSE4.1
#=GS I0K6V5_9BACT/26-223 AC I0K6V5.1
#=GS U2PW96_9CLOT/25-232 AC U2PW96.1
#=GS A0A1I9SER9_9CAUD/25-217 AC A0A1I9SER9.1
#=GS A0A3B8DKI3_9CAUD/68-270 AC A0A3B8DKI3.1
#=GS A0A0N1LB37_9PROT/21-220 AC A0A0N1LB37.1
#=GS A0A6B9X8B9_9CAUD/75-267 AC A0A6B9X8B9.1
#=GS Q5YA76_9CAUD/28-239 AC Q5YA76.1
#=GS A0A0Q8RFG3_9SPHN/36-227 AC A0A0Q8RFG3.1
#=GS S5MC58_9CAUD/25-231 AC S5MC58.1
#=GS A0A1I3J2Z1_9FIRM/18-222 AC A0A1I3J2Z1.1
#=GS A0A5B7LZ57_9CAUD/47-242 AC A0A5B7LZ57.1
#=GS A0A0S2MXW5_9CAUD/29-227 AC A0A0S2MXW5.1
#=GS A0A0X8XDQ0_9CAUD/31-241 AC A0A0X8XDQ0.1
#=GS A0A1R1DH00_9BACL/23-226 AC A0A1R1DH00.1
#=GS A0A173H0R0_9CAUD/17-217 AC A0A173H0R0.1
#=GS A0A3E2NXQ4_9SPHI/14-201 AC A0A3E2NXQ4.1
#=GS A0A841SLH9_9BACL/24-226 AC A0A841SLH9.1
#=GS A0A328UEF8_9FIRM/31-235 AC A0A328UEF8.1
#=GS A0A4D6AKM1_9CAUD/26-230 AC A0A4D6AKM1.1
#=GS U3PBE8_9CAUD/24-235 AC U3PBE8.1
#=GS A5MCF3_STREE/31-238 AC A5MCF3.1
#=GS A0A0M2NDA4_9FIRM/21-224 AC A0A0M2NDA4.1
#=GS A0A061P407_9BACL/23-234 AC A0A061P407.1
#=GS A0A4D6AXG7_9CAUD/20-231 AC A0A4D6AXG7.1
#=GS A0A377I1B9_HAEPH/16-207 AC A0A377I1B9.1
#=GS A0A1H8SYC8_9ACTN/23-199 AC A0A1H8SYC8.1
#=GS A0A211ZFT2_9PROT/61-255 AC A0A211ZFT2.1
#=GS A0A0C2HE68_9STAP/28-232 AC A0A0C2HE68.1
#=GS C3WEU3_FUSMR/29-250 AC C3WEU3.1
#=GS A0A1S5SEZ3_9CAUD/31-238 AC A0A1S5SEZ3.1
#=GS A0A1W6JNP5_9CAUD/20-227 AC A0A1W6JNP5.1
#=GS H2BD76_9CAUD/19-217 AC H2BD76.1
#=GS A0A095YTA7_9BURK/17-210 AC A0A095YTA7.1
#=GS A0A7X6GRI7_9RHOB/20-217 AC A0A7X6GRI7.1
#=GS R9MAJ9_9FIRM/19-230 AC R9MAJ9.1
#=GS A0A3M6QZU8_9BURK/19-221 AC A0A3M6QZU8.1
#=GS I7B2N3_9CAUD/26-218 AC I7B2N3.1
#=GS A0A2K8HZU7_9CAUD/25-218 AC A0A2K8HZU7.1
#=GS A0A7R6VQ95_9CAUD/19-209 AC A0A7R6VQ95.1
#=GS A0A4D6A8V3_9CAUD/25-230 AC A0A4D6A8V3.1
#=GS A0A5C1K782_9CAUD/29-227 AC A0A5C1K782.1
#=GS A0A3G3BX89_9CAUD/21-234 AC A0A3G3BX89.1
#=GS J7FA77_9CAUD/16-209 AC J7FA77.1
#=GS A0A7L7STX5_9CAUD/32-230 AC A0A7L7STX5.1
#=GS A0A0M4R5N5_9CAUD/21-232 AC A0A0M4R5N5.1
#=GS A0A6I5WUI5_9SPHN/23-218 AC A0A6I5WUI5.1
#=GS A0A0F0GSJ8_LENAE/19-187 AC A0A0F0GSJ8.1
#=GS A0A2G8E7N8_9GAMM/20-212 AC A0A2G8E7N8.1
#=GS A0A328TTK7_9GAMM/1-143 AC A0A328TTK7.1
#=GS A0A076GY74_9SYNE/25-241 AC A0A076GY74.1
#=GS A0A286QMU7_9CAUD/21-232 AC A0A286QMU7.1
#=GS A0A2U8UW94_9CAUD/17-194 AC A0A2U8UW94.1
#=GS A0A4Q2LJS1_9BACL/18-231 AC A0A4Q2LJS1.1
#=GS A0A6F9EXJ6_9CAUD/4-206 AC A0A6F9EXJ6.1
#=GS A0A387BL14_9LACT/19-222 AC A0A387BL14.1
#=GS A0A8E4ZJW0_9CAUD/22-230 AC A0A8E4ZJW0.1
#=GS A0A366DQ70_9BACI/19-230 AC A0A366DQ70.1
#=GS A0A2K8VCR1_9FLAO/29-274 AC A0A2K8VCR1.1
#=GS A0A127VI13_9SPHI/3-178 AC A0A127VI13.1
#=GS D0GNY2_9FUSO/19-239 AC D0GNY2.1
#=GS A0A127KNT7_9CAUD/19-217 AC A0A127KNT7.1
#=GS L1Q8F3_9CLOT/296-499 AC L1Q8F3.1
#=GS R5BT21_9FIRM/18-227 AC R5BT21.1
#=GS C8WLW0_EGGLE/151-356 AC C8WLW0.1
#=GS A0A8J6M980_9FIRM/26-228 AC A0A8J6M980.1
#=GS A0A0A2M2R8_9FLAO/18-226 AC A0A0A2M2R8.1
#=GS A0A1B1UZZ1_9CAUD/27-231 AC A0A1B1UZZ1.1
#=GS A0A385C4E7_9GAMM/17-211 AC A0A385C4E7.1
#=GS A0A519WYB3_9SPHI/28-232 AC A0A519WYB3.1
#=GS A0A1Y4DMS8_9ACTN/23-231 AC A0A1Y4DMS8.1
#=GS A0A2V3PVC5_9BACT/18-202 AC A0A2V3PVC5.1
#=GS A0A845R3I1_9FIRM/22-228 AC A0A845R3I1.1
#=GS A0A7D4Q7Y8_9SPHI/14-201 AC A0A7D4Q7Y8.1
#=GS A0A6C0FYF7_9BACL/20-224 AC A0A6C0FYF7.1
#=GS A0A3G3M6V2_9CAUD/14-206 AC A0A3G3M6V2.1
#=GS A0A222Z9P5_9CAUD/25-240 AC A0A222Z9P5.1
#=GS A0A1H9UGR5_9SPHN/19-218 AC A0A1H9UGR5.1
#=GS A0A1M7AJA3_9PROT/18-209 AC A0A1M7AJA3.1
#=GS A0A1Y4AXZ8_9BACE/16-237 AC A0A1Y4AXZ8.1
#=GS A0A060QN62_9CAUD/31-238 AC A0A060QN62.1
#=GS A0A410Q7F2_9FIRM/28-235 AC A0A410Q7F2.1
#=GS A0A841KYW5_9CLOT/25-238 AC A0A841KYW5.1
#=GS A0A660E0E1_9LACO/22-231 AC A0A660E0E1.1
#=GS A0A519X6J6_9SPHI/33-220 AC A0A519X6J6.1
#=GS B8QU22_BPPPB/15-207 AC B8QU22.1
#=GS A0A4P6YVV7_9LACO/20-231 AC A0A4P6YVV7.1
#=GS F9VIT3_ARTSS/21-227 AC F9VIT3.1
#=GS A0A1R1ES71_9BACL/18-229 AC A0A1R1ES71.1
#=GS M4ZRM5_9CAUD/20-233 AC M4ZRM5.1
#=GS A0A511B0Q2_9PROT/16-208 AC A0A511B0Q2.1
#=GS R6P8C3_9CLOT/27-228 AC R6P8C3.1
#=GS A0A6H0X5V9_9CAUD/21-213 AC A0A6H0X5V9.1
#=GS A0A7Y0BP43_9SPHN/37-228 AC A0A7Y0BP43.1
#=GS A0A7G4AWJ3_9VIRU/57-230 AC A0A7G4AWJ3.1
#=GS V8G8Y4_9BURK/20-210 AC V8G8Y4.1
#=GS A0A6B9LFA4_9CAUD/20-203 AC A0A6B9LFA4.1
#=GS A0A6B9J0P4_9CAUD/25-224 AC A0A6B9J0P4.1
#=GS A0A421BFJ7_9LACT/19-228 AC A0A421BFJ7.1
#=GS A0A840YAK4_9SPHN/18-223 AC A0A840YAK4.1
#=GS A0A1I0GVE9_9RHOB/18-215 AC A0A1I0GVE9.1
#=GS A0A6M1NAS5_9SPHI/26-206 AC A0A6M1NAS5.1
#=GS Q94M50_9CAUD/21-231 AC Q94M50.1
#=GS A0A1S5SGG8_9CAUD/31-238 AC A0A1S5SGG8.1
#=GS W0EDP9_9FIRM/25-221 AC W0EDP9.1
#=GS A0A076GXM2_9SYNE/23-235 AC A0A076GXM2.1
#=GS A0A1T2XC40_9BACL/48-239 AC A0A1T2XC40.1
#=GS A0A1M6MYR1_9CLOT/25-228 AC A0A1M6MYR1.1
#=GS F9DX35_9BACL/4-91 AC F9DX35.1
#=GS A0A7L5DWN0_9SPHI/14-202 AC A0A7L5DWN0.1
#=GS A0A172RXI7_9ACTN/32-239 AC A0A172RXI7.1
#=GS A0A2N0ZMW8_9BACI/23-238 AC A0A2N0ZMW8.1
#=GS A0A059NXR7_9BACI/21-225 AC A0A059NXR7.1
#=GS K1LCW1_9LACT/24-222 AC K1LCW1.1
#=GS A0A1Y3XSA7_9ACTN/23-231 AC A0A1Y3XSA7.1
#=GS A0A1T0CK97_9GAMM/18-215 AC A0A1T0CK97.1
#=GS A0A7L8ZJ18_9CAUD/15-207 AC A0A7L8ZJ18.1
#=GS A0A141DZF2_9CAUD/31-238 AC A0A141DZF2.1
#=GS A0A839IWB8_9GAMM/1-76 AC A0A839IWB8.1
#=GS S5MCL5_9CAUD/25-231 AC S5MCL5.1
#=GS A0A4R5N8D7_9LACO/31-234 AC A0A4R5N8D7.1
#=GS A0A4D6BF59_9CAUD/30-241 AC A0A4D6BF59.1
#=GS A0A7M2RNW2_9FIRM/20-231 AC A0A7M2RNW2.1
#=GS F9UQW2_LACPL/26-216 AC F9UQW2.1
#=GS A0A7D7IT45_9CAUD/72-275 AC A0A7D7IT45.1
#=GS I2GUC3_9CAUD/21-234 AC I2GUC3.1
#=GS A0A1T0B203_9PAST/15-206 AC A0A1T0B203.1
#=GS A0A482MFQ1_9CAUD/16-209 AC A0A482MFQ1.1
#=GS A0A1H1ARI2_9GAMM/19-220 AC A0A1H1ARI2.1
#=GS R6PLJ3_9CLOT/18-203 AC R6PLJ3.1
#=GS A0A3S0P6A4_9BACI/20-243 AC A0A3S0P6A4.1
#=GS A0A4R2RXP5_9FIRM/25-231 AC A0A4R2RXP5.1
#=GS A0A1W1ZBQ8_9SPHI/20-224 AC A0A1W1ZBQ8.1
#=GS A0A889IPV5_9CAUD/16-207 AC A0A889IPV5.1
#=GS A0A141E0T4_9CAUD/31-238 AC A0A141E0T4.1
#=GS A0A8H2MGH8_9FIRM/23-230 AC A0A8H2MGH8.1
#=GS A0A1L7DQ91_9CAUD/29-227 AC A0A1L7DQ91.1
#=GS S1NK09_9ENTE/23-221 AC S1NK09.1
#=GS A0A509EC37_9HYPH/1-145 AC A0A509EC37.1
#=GS A0A4D6A4S3_9CAUD/21-232 AC A0A4D6A4S3.1
#=GS Q9A018_STRP1/26-233 AC Q9A018.1
#=GS A0A0R2AG49_9LACO/1-95 AC A0A0R2AG49.1
#=GS A0A0F6N3L3_9CAUD/22-229 AC A0A0F6N3L3.1
#=GS A0A1G8RT01_9BACI/27-234 AC A0A1G8RT01.1
#=GS A0A0A0X340_9SPIR/24-232 AC A0A0A0X340.1
#=GS R8W503_9CLOT/30-256 AC R8W503.1
#=GS K4M4B9_9CAUD/30-243 AC K4M4B9.1
#=GS A0A0A2MJJ3_9FLAO/17-222 AC A0A0A2MJJ3.1
#=GS A0A7K1UAN9_9BACT/23-252 AC A0A7K1UAN9.1
#=GS F7V7P3_CLOSS/125-321 AC F7V7P3.1
#=GS A0A174INQ8_9BACE/23-271 AC A0A174INQ8.1
#=GS A0A2N7VQ27_9BURK/28-210 AC A0A2N7VQ27.1
#=GS C4Z827_AGARV/77-214 AC C4Z827.1
#=GS R7LW13_9FUSO/48-247 AC R7LW13.1
#=GS A0A1G7BFF9_9FLAO/17-127 AC A0A1G7BFF9.1
#=GS R9JJE2_9FIRM/49-254 AC R9JJE2.1
#=GS U2SWY3_9FUSO/23-227 AC U2SWY3.1
#=GS Q3ABI4_CARHZ/25-228 AC Q3ABI4.1
#=GS A0A8E3UXW6_9CAUD/76-277 AC A0A8E3UXW6.1
#=GS A0A4D6AQA9_9CAUD/21-230 AC A0A4D6AQA9.1
#=GS A0A2T4Z8Z5_9BACL/28-234 AC A0A2T4Z8Z5.1
#=GS A0A4D6A5R3_9CAUD/21-230 AC A0A4D6A5R3.1
#=GS A0A845PUK3_9FLAO/31-219 AC A0A845PUK3.1
#=GS A0A4D6B4W4_9CAUD/32-239 AC A0A4D6B4W4.1
#=GS A0A367GLN2_9SPHI/15-203 AC A0A367GLN2.1
#=GS A0A0X1RXV7_9BACL/27-231 AC A0A0X1RXV7.1
#=GS E1SKA4_PANVC/1-170 AC E1SKA4.1
#=GS A0A4D6B769_9CAUD/110-207 AC A0A4D6B769.1
#=GS A0A211ZGD8_9PROT/144-337 AC A0A211ZGD8.1
#=GS A0A367GH72_9FIRM/34-236 AC A0A367GH72.1
#=GS A0A5B8LHW5_9SPHN/19-210 AC A0A5B8LHW5.1
#=GS A0A6N1VE16_9HYPH/23-216 AC A0A6N1VE16.1
#=GS A0A5B8WEY3_9CAUD/25-240 AC A0A5B8WEY3.1
#=GS A0A5P8PHT9_9CAUD/25-231 AC A0A5P8PHT9.1
#=GS A0A0K1LKS3_9CAUD/175-283 AC A0A0K1LKS3.1
#=GS A6Q270_NITSB/19-209 AC A6Q270.1
#=GS A0A4D6AX86_9CAUD/21-231 AC A0A4D6AX86.1
#=GS A0A0A0X546_9SPIR/24-232 AC A0A0A0X546.1
#=GS V9HJT4_9NEIS/23-215 AC V9HJT4.1
#=GS A0A167HMZ1_9FLAO/5-174 AC A0A167HMZ1.1
#=GS A0A0E3M4M2_9CAUD/17-194 AC A0A0E3M4M2.1
#=GS R6MJA7_9FIRM/22-225 AC R6MJA7.1
#=GS A0A3Q8HZH8_9CAUD/27-234 AC A0A3Q8HZH8.1
#=GS G8NRE6_GRAMM/29-236 AC G8NRE6.1
#=GS A0A2S1PDN5_9CAUD/25-224 AC A0A2S1PDN5.1
#=GS K4LGT5_9FIRM/27-261 AC K4LGT5.1
#=GS A0A0R2BZQ8_9LACO/22-229 AC A0A0R2BZQ8.1
#=GS A0A3N0I0J2_9FIRM/24-229 AC A0A3N0I0J2.1
#=GS A0A6M1U7K2_9BACL/19-231 AC A0A6M1U7K2.1
#=GS R5AA21_9CLOT/1-37 AC R5AA21.1
#=GS A0A2A2S8K1_9SPHI/16-204 AC A0A2A2S8K1.1
#=GS A5VW75_9CAUD/14-206 AC A5VW75.1
#=GS A0A1V1WBK6_9ACTN/25-221 AC A0A1V1WBK6.1
#=GS A0A1M7NJX9_9FIRM/319-527 AC A0A1M7NJX9.1
#=GS A0A3D9Z5J5_9HYPH/18-208 AC A0A3D9Z5J5.1
#=GS A0A3A9B9P7_9BACT/19-225 AC A0A3A9B9P7.1
#=GS A0A0S2MU55_9CAUD/17-198 AC A0A0S2MU55.1
#=GS A0A7S5WRZ2_9CAUD/25-238 AC A0A7S5WRZ2.1
#=GS A0A125RNL7_9CAUD/20-218 AC A0A125RNL7.1
#=GS A0A2T8HLL6_9SPHI/46-259 AC A0A2T8HLL6.1
#=GS R6F235_9BACE/16-223 AC R6F235.1
#=GS A0A4D5ZZ00_9CAUD/21-232 AC A0A4D5ZZ00.1
#=GS B6D7H5_9CAUD/32-245 AC B6D7H5.1
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