GenomeNet

Database: Pfam
Entry: Tgi2PP
LinkDB: Tgi2PP
Original site: Tgi2PP 
#=GF ID   Tgi2PP
#=GF AC   PF18250.5
#=GF DE   Effector immunity protein Tgi2PP
#=GF AU   Smart A;0000-0002-6965-5633
#=GF SE   ECOD:EUF03940
#=GF GA   27.00 27.00;
#=GF TC   27.20 42.00;
#=GF NC   23.60 21.00;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -Z 75585367 -E 1000 HMM pfamseq
#=GF TP   Domain
#=GF RN   [1]
#=GF RM   23878199
#=GF RT   Identification, structure, and function of a novel type VI
#=GF RT   secretion peptidoglycan glycoside hydrolase effector-immunity
#=GF RT   pair.
#=GF RA   Whitney JC, Chou S, Russell AB, Biboy J, Gardiner TE, Ferrin MA,
#=GF RA   Brittnacher M, Vollmer W, Mougous JD;
#=GF RL   J Biol Chem. 2013;288:26616-26624.
#=GF DR   INTERPRO; IPR041600;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This domain is Tgi2PP found in Pseudomonas protegens. Tgi2PP is
#=GF CC   part of the Tge2PP- Tgi2PP Effector-immunity pair secreted by
#=GF CC   the type VI secretion system (T6SS). Tgi2PP interacts
#=GF CC   predominantly by hydrogen bonding and hydrophobic interactions
#=GF CC   with Tge2PP via the insertion of the beta-sheet core of Tgi2PP
#=GF CC   into the substrate-binding groove of Tge2PP. Tgi2PP contains a
#=GF CC   similar topology to the periplasmic E. coli colicin M immunity
#=GF CC   protein [1].
#=GF SQ   2
#=GS C1F8W7_ACIC5/42-84      AC C1F8W7.1
#=GS A0A372IMP9_9BACT/24-66  AC A0A372IMP9.1
C1F8W7_ACIC5/42-84                 ..GIPVSDEHIEVDTMDAGAPYLKGFASFLVLRESTTPGPDTTLA.
A0A372IMP9_9BACT/24-66             hi--DTADTHIEFNSMDMNAAFIRGFSSFIVIRESASQEPDETL-r
#=GC seq_cons                      ....ssuDpHIEhsoMDhsAsal+GFuSFlVlRESso.tPDpTL..
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