#=GF ID   Tricho_coat
#=GF AC   PF05892.15
#=GF DE   Trichovirus coat protein
#=GF AU   Moxon SJ;0000-0003-4644-1816
#=GF SE   Pfam-B_9763 (release 8.0)
#=GF GA   25.00 25.00;
#=GF TC   25.00 29.80;
#=GF NC   21.40 20.70;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -E 1000 -Z 75585367 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   7944948
#=GF RT   Nucleotide sequence of the 3' terminal region of the RNA of two
#=GF RT   filamentous grapevine viruses. 
#=GF RA   Minafra A, Saldarelli P, Grieco F, Martelli GP; 
#=GF RL   Arch Virol 1994;137:249-261.
#=GF DR   INTERPRO; IPR008879;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This family consists of several coat proteins which are specific
#=GF CC   to the ssRNA positive-strand, no DNA stage viruses such as the
#=GF CC   Trichovirus and Vitivirus.
#=GF SQ   32
#=GS A0A2H4N960_9VIRU/6-201      AC A0A2H4N960.1
#=GS F8LZ65_9VIRU/4-195          AC F8LZ65.2
#=GS POLG_ASGVP/1881-2104        AC P36309.1
#=GS Q91QY2_9VIRU/2-195          AC Q91QY2.1
#=GS K4P1P6_9VIRU/2040-2223      AC K4P1P6.1
#=GS A0A0H3Y7E3_9VIRU/34-221     AC A0A0H3Y7E3.1
#=GS A0A1V0JB99_9VIRU/6-192      AC A0A1V0JB99.1
#=GS Q5IJA1_9VIRU/7-193          AC Q5IJA1.1
#=GS J7H706_9VIRU/6-198          AC J7H706.1
#=GS A0A0A0P9W1_9VIRU/14-206     AC A0A0A0P9W1.1
#=GS A0A1J7HMM9_LUPAN/14-186     AC A0A1J7HMM9.1
#=GS A0A0A0P3R4_9VIRU/11-196     AC A0A0A0P3R4.1
#=GS CAPSD_GVAIS/6-198           AC Q67707.1
#=GS A0A2S1YE88_9VIRU/4-199      AC A0A2S1YE88.1
#=GS A0A2S1ZRC9_9VIRU/53-253     AC A0A2S1ZRC9.1
#=GS A0A2K8JBC9_9VIRU/3-199      AC A0A2K8JBC9.1
#=GS K4P3S8_9VIRU/2094-2223      AC K4P3S8.1
#=GS B3Y534_9VIRU/8-199          AC B3Y534.1
#=GS A0A240G1F5_9VIRU/6-197      AC A0A240G1F5.1
#=GS Q96809_9VIRU/6-197          AC Q96809.1
#=GS F4ZNG9_9VIRU/2042-2223      AC F4ZNG9.1
#=GS A0A126JJK9_9VIRU/2332-2521  AC A0A126JJK9.1
#=GS W0UUT5_9VIRU/30-217         AC W0UUT5.1
#=GS A0A1B1IHW2_9VIRU/1880-2080  AC A0A1B1IHW2.1
#=GS A0A2L0V1P9_9VIRU/37-220     AC A0A2L0V1P9.1
#=GS G8H9D7_9VIRU/8-198          AC G8H9D7.1
#=GS B5ACE4_PVT92/9-210          AC B5ACE4.1
#=GS CAPSD_ACLSP/7-193           AC P27737.1
#=GS A0A2U1PLM9_ARTAN/753-854    AC A0A2U1PLM9.1
#=GS A0A075DMR3_9VIRU/7-219      AC A0A075DMR3.1
#=GS Q9IMS7_9VIRU/7-193          AC Q9IMS7.1
#=GS A0A288XSD9_9VIRU/6-197      AC A0A288XSD9.1
A0A2H4N960_9VIRU/6-201                 .............................................................krmrra-------......-VLTLLSVKHPALKSEPSSDEE.K...ELnhnIL.......SNIFGNIGIIGTSAKIS-...............-NY........PES-IRC..YDLSAG....RLNPA.LLKgED.IKLG....EILVTMIVVSKAADGPPMCGATLRQMCEPFANEAYHYLKAAANSGVYTNLAKKMTRAGNKEPQVMFDFSKGLA..I...SR....LT..RSEASV.MQVMHQRVFRTEGAKGVFEAQSNVAEGPVE-v.............
F8LZ65_9VIRU/4-195                     ................................................rqelrstvrreliaklsea-------......---------NQV--LHGLTEGN.K...DL...VL.......DHIFANIAVEGTSGETIY...............---........-PTTMV-..-KCYES....FNPSL.PVV.KE.YSLA....EVVNKIRVYKESHTNNDIKLMTFRQVCAAFAIDAQLGLVKFYRLNMHTNIYKKHPKLCDKAPEVAFDFNEGLN..F...NN....LT..PNQKSV.IQNLNRLLFHVESEKQKTNAITASGESAF--sm............
POLG_ASGVP/1881-2104                   ...................................................................HRVGVYLwkthidPAKELLTVPPPEGFKEGESFEG.K...EL...YLllcnhycKYLFGNIAVFGSSDKTQFpavg......fdtppVHYnltttpkeGETD-EG..RKARAG....SSGEK.TKI.WR.IDLS....NVVPELKTFAATSRQNSLNECTFRKLCEPFADLAREFLHERWSKGLATNIYKKWPKAFEKSPWVAFDFATGLK..M...NR....LT..PDEKQV.IDRMTKRLFRTEGQKGVFEAGSES-------nlele.........
Q91QY2_9VIRU/2-195                     ..........................................sirqelrdlvrvelikklsedkqal-------......---------------HGLNESN.Q...ST...VL.......DHIFGNIAIEGTSEETVY...............---........P-QSLT-..-KCHEG....FDPTM.PVI.KE.YSLS....NVVNKIRIYKESHKNEDIKSMTLRQICASFAIDAKLGLQKFGRYGVHSNMFKKHPSICEKAPEMAFDFNDGLN..F...NL....LT..KQQKKV.IQNLNQLLFRVESEKQKTNAITSSSEGA---ftm...........
K4P1P6_9VIRU/2040-2223                 .....keyvknlghantpaeftaaeseiygrvmsdfaayafgimaeegfspatiynevpasytieyp-------......----------------------.-...--...--.......------------------...............---........-------..------....-----.QPV.GA.LNVSfspaEVSRQFKYYANSSGNSCFANITWRQIGESFAEDIVRYFKELQV-DAQSWLVRSNPVLAGNAPWVALDVTDGLD..V...RR....LN..PEEKKV.IARAKNHLLKSMQLKGR--------------eslsaeall.....
A0A0H3Y7E3_9VIRU/34-221                ..........................................etgaggearnltphlqeqkarvlad-------......----------------------.-...--...RL.......RTLFGNIADHSAGPSTVF...............---........PNMDVSF..MRLTVQ...gVDGVP.EMV.GS.FNLR....TFVENLKTHAATHQDRRMMGVTLREVCRSFANCALEYY--MADEDRYSNLAEKMPQLAALSREVMFDFSDGIS..P...QY....LRgfPSRARV.IQDLGSRLLQSTGTKAVFEARGTI-------eghtnli.......
A0A1V0JB99_9VIRU/6-192                 ...................................................rrtavitllgaytevk-------......--------------DRLDKPDT.L...SE...VL.......EGVFGHIALIGTSNKA--...............VYP........ASVVLH-..--NRDC....TRADF.TKG.IA.FPLR....SFVLALKGLGKSADNEPIAGSTLRQFCDPFAEEARSYLLRAVTWGSYSQLALKLAKLGQREPQVCFDFSKGLD..L...LN....IS..VSEAQV.IQSLHSRLFRTEGAKGVFAAQSSVGEQAVEI..............
Q5IJA1_9VIRU/7-193                     ................................................................lrs---KADT......QLRAFLAQEGGPL--HGKTGAT.V...EL...IL.......QSIFANIAIQGTSEQTEF...............---........--LNEV-..--VEVK....EPGDS.TLL.QS.YNLR....TVVNLIKMFKTSSTDGNINGMTFRQLCEAFAPEARDGLVRLKYMGVFTNLYGTMPEVGGKHPELMFDFNRGLN..M...LI....MD..QKRRTL.ITNMHRRLMQTEHAKSENEAKISAVSTDLCV..............
J7H706_9VIRU/6-198                     ..................................................................r-RMNMRE......VVETLVLSGANLSENTETAGYD.K...QM...YL.......RTLFGYIALVGTSKKA--...............VHY........GEVQIMG..PRTNKV....RGVDA.R--.GV.INIA....EQVNRMRGLSVAVTEGVAKDATVRQMCEPFAKEAYEALIMLAGLGVYSQLAIKMSRLGNKEPQVMFDFAAGLD..V...GS....LS..RQEATV.MQAMHARLFRTEHAKEVFDAQASVGEQAAEI..............
A0A0A0P9W1_9VIRU/14-206                .................................fmmtilleelislntgteigksidsldlignsll-------......----------------------.-...NN...YR.......DHFLINMAELGTSPDTL-...............--Y........EMEPFEL..PKVTLV....SNGEK.KDYkLK.MSIG....SAVNSIMNQIEGDHRLLTCNTTLRNTLGAFGTETKRQLKNRKIDGI---LARKYPKLCKQAMHMGFDFNQDIP..T...NE....LS..KSEMKV.KQYLYQQLKRKEARRGQYEEDISVV------dfe...........
A0A1J7HMM9_LUPAN/14-186                .............................................sevvvgayplgnhralfdplmr-------......----------------------.-...-H...YY.......KFVFGNIVVYGASDNTVYp.............pVHF........TTTTIT-..--YTIG....AAAPV.VKQ.WE.INLK....DVVVQLKGACRDSEIEAVKVATWRNICEAFAEEAREFLKES-EGELTTNLYDKWPRAFEVAPWIAFDFAGGLS..M...TK....LS..SGEKKV.IEIMTKQLFRTQGQSAVF-------------..............
A0A0A0P3R4_9VIRU/11-196                ...............................................................rsdi----VKL......ALKEELRSLNTEIDEKGTYFKQvL...EY...YI.......MYFVLNMAEMGTSPDT--...............V-Y........PSENFEL..KPVTMK....SGDEPkTFI.LK.MNLI....TCIDRIQDLSEN--RVDLGDLTLRSFMRPFADIAKKQLQKR---GVDGILARKYPRVCRGAKHMGFDFNQDLQ..S...SE....LS..NSEMRV.KQNLGRVMFNRGLKVAN--------------leesssidf.....
CAPSD_GVAIS/6-198                      ...................................................................KRVEIRA......IIEELVLAKAQPTDDASESGYD.R...NM...YL.......NTLFGYIALVGTSKKA--...............IHY........GEVDIVG..PKASKK....TGIDP.R--.GK.MVVS....ELVGRMRTLSVAVSEGPVKGATLRQMCEPFAQNAYDFLVVMAEMGTYSQLATKMTRSGFKEPQVMFDFASGLD..L...KA....LT..LQEATV.IQAMHSRLFRTEGAKGVFNAQSSIGEQAVEI..............
A0A2S1YE88_9VIRU/4-199                 ...............................................................kavr------E......AVITLMSVKAPGVLVDPKSDEE.R...EL...SNn....tiANIFGNIAIYGTSSKVSSy.............pISV........RCFDL--..---SVG...rLKEDK.LKG.AD.LKIA....EIVISMLTISKAASEPPLAGITLRQMCEPFATDAYLFLKVAANSNIYSNLARKMTRSGNKEPQVLFDFAKGLP..I...NK....LT..RSEASA.IQVMHQRLFRTEGAKGVFDAQSNVGENSVEL..............
A0A2S1ZRC9_9VIRU/53-253                ..........................railkqllstqssdivkkldkininndgnlatdnkcalalf-------......----------------------.-...SY...YL.......DNVVLNLAILGTSELTEF...............-SE........TAFDLPV..LKIKDG....EIEEM.Y-Q.MT.MNIS....SVVDEIQSMKFGATEEDLSSATLRRVMSPFGSRAHQMLLKSK---MSTKLFEKFPHVCRKAPQVAFDFNVQLS..G...RN....LS..QAEKKV.KENLGRIIFKREIARAEYSSK----------evdsgvve......
A0A2K8JBC9_9VIRU/3-199                 ................................................................ske----IRK......AVLQLLSVKVPGLSAEPKTPEE.LvvsSN...IL.......SNIFGQIAIVGTSSAIES...............-FP........EELPLY-..DLATGR....LDDTK.TAG.AN.LKLG....EIIFALASMVKMATQPPMAGLTLRQVCTPFAAEAYIFLKTAAASKVYTNLARKMTRIGNKEPQVVFDFAKGLA..I...GK....LT..RSEASC.IQVMHQRLFRTEGAKSVFDAQSQVGENSVEV..............
K4P3S8_9VIRU/2094-2223                 ..............................................tnytidygapvgnitvefspa-------......----------------------.-...--...--.......------------------...............---........-------..------....-----.---.--.----....NISREFKYYANSSNNNIFDNITWRQIGEAFAEDIVRYFKELQPD-AQSWLVRSNPVLAGNAPWVALDVTDGLD..I...RR....LN..PEEKKV.IARAKNHLLKSMQLKGR--------------eslsaeall.....
B3Y534_9VIRU/8-199                     .....................................................salmtvfeakipgl-------......--------KAEPT--NQEEVAR.N...NS...IL.......ANLFGNIAIVGTSAAV--...............INY........P-VSVPC..YNLESG....RLNPH.ELM.GEpLKVA....QVVMYMIAVRNSTTEPPLANLTLRQMCTPFAPEAYLFLRTAASAKIYTQLARKMTRIGNKEPQVVFDFAKGLP..L...ST....LT..RSEASC.IQVMHQRLFRTEGAKGVFDAQSQVGENSVEV..............
A0A240G1F5_9VIRU/6-197                 ..............................................................rnqrl-----RE......TIKTLVLADAEPVEKPDDAGYD.P...GM...YL.......RTLFGYIALVGTSKKA--...............QHY........GVVDIIG..PKSNR-....NNVDS.R--.GK.INVS....EKVASIMALSRAVSEGPLVGATLRQMCEPFAQEAYEMLAKMAEMGLYSQLARKMARLGNKEPQVMFDFASGLD..I...SR....LT..LQEATV.IQAMHSRLFRTEGAKGVFNAQSSVGEQAVEI..............
Q96809_9VIRU/6-197                     ................................................................rma---KIRS......NISELLCAGVTFVTDARETGFD.R...PM...YF.......RTLFGYIALTGTSAKA--...............QHY........ENVDIIG..DKVGAE....-GIDS.R--.GT.INIS....EQVKKMMGYSRAVPSGVCKGLTLRQMCEPFAEEARDCLTILATLRVYSRLALKMAKLGQKEPQVMFDFNSGLN..L...LT....LS..ATEASA.IQSLNSRLFRTEGAKNVFTAQADVGEQSVEI..............
F4ZNG9_9VIRU/2042-2223                 sfqnlgnantpqnftdaesvtygrimsdfaahafgilaeegfspatsyssvgtnytidygapvgstt-------......----------------------.-...--...--.......------------------...............---........-------..------....-----.---.IR.FNPA....EVARTFKYLYQSSPNNLFENMTWRQCGEAFATDIVRYFKELQP-DAQSWLVKSNPVLAGNAPWVALDVTDGLD..I...RH....LN..PEEKKV.IARAKNHLLRSMQLKGK--------------eslsaeall.....
A0A126JJK9_9VIRU/2332-2521             ...............................................aeipasegvaaqpavrlseg-------......--------------DQATKIAL.K...DF...YL.......KILFGNLAVIGVSEMTIY...............-PN........IPMIIEP..PEIAGR....PNLQQ.HLP.TS.MSLA....NFAQIVKAWGAVGAGGRFRDYTLRQLCEPFARQAHDFFRE--HPGEASGIYKKNPGIYFMCPQVVFDFNKGLP..L...SI....VN..QGKNAVaISACNKRLMDREGKKAVFSAQGEV-------nls...........
W0UUT5_9VIRU/30-217                    .............................................walkttvegaarnltadhlrrk-------......-------------------AAI.L...NH...HL.......KLIAGNVAEIGANENYQW...............---........PNEDIP-..VPAYSP....PQEQV.NCA.VP.INLR....DWVNALMLLIRNHQNRNWRQTTMREAMKSLADQALDYFLEDPT--RVGHLAEKMPDFADTAREVMFDFATGLS..Q...RHiigpIH..KNRRMA.IQNAQSRLFKTEGTKMFFEARG---------tvdrva........
A0A1B1IHW2_9VIRU/1880-2080             .........................................hrvtvylwenyidkekklkkeppspd-------......--------------SPEITGEG.S...ET...YKvvskhfvKYLFGNIAVFGSSEKTEY...............---........--PDIEF..YIPEIK....A-GDV.QVK.WK.ISLG....VIVPEIKSFCGMHDRIAMNRATWRNICEAFAEEAMMFLKERFHMGTTTAIYKKFPKAFAGAPHVVFDFASGLD..M...SK....LN..PNELTV.IDKMTKRLFRTEGQKGIFEANQEV-------nlele.........
A0A2L0V1P9_9VIRU/37-220                ......................................................sngnvrhlntntm-------......--------------------EQ.K...SR...IMtd...rlKAIFGNIADYSAGPATNFps...........iiVDF........NVMNVN-..-GIENL....TSID-.---.GS.FNLR....TTVETMKTYIATHQDQRISSSTLREVCRSFANFALNYYLDD--EDRQSNLADKMPQLALMAREVMFDFSDGISpsM...LR....SH..PNRTKV.IQELNSRLLQSTGTKAVFEARGTV-ESAVN-l.............
G8H9D7_9VIRU/8-198                     ..............................................................tgnlr------K......EIEELVLTGVVLAPDAKTAGVD.K...GM...YL.......RTLFGYIALNGTSKKT--...............THY........DDVDIIG..NNIT-E....TSIDS.R--.GK.INVA....TAVRQMLSFSRITPTGAAKGATLRQMCEPFAEEARECLAILASKGIYSQLATKLSKLGQKEPQVMFDFNGGLD..L...GR....MS..ATEAAT.TQSLNSRLFRTEGAKAVFAAQSSVGEQAVEI..............
B5ACE4_PVT92/9-210                     .......................................irdevlnltvaayssqwdgqatqalkdg-------......---------------------A.K...EQ...ML.......RFLFGRIAISSASRNTIWpd...........teIAS........EDLQIGM..SAASAGpppvAAAPI.SLI.FR.VNFN....SYVKMLIALSNTSTNSFVKNKTLRQMCMPFAKYAYGYLS---EMGYATWAYEKMPKLCRKAKWVAFDFASGLL..IdttMQ....LN..DDEKTV.IQGLGARLFKTQQS-----------------iqiadstmdgeain
CAPSD_ACLSP/7-193                      ..................................................................l-QLKVDA......SLKAFLGAENRPL--HGKTGAT.L...EQ...IL.......ESIFANIAIQGTSEQTEF...............---........--LDLV-..--VEVK....SMEDQ.SVL.GS.YNLK....EVVNLIKAFKTTSSDPNINKMTFRQVCEAFAPEARNGLVKLKYKGVFTNLFTTMPEVGSKYPELMFDFNKGLN..M...FI....MN..KAQQKV.ITNMNRRLLQTEFAKSENEAKLSSVSTDLCI..............
A0A2U1PLM9_ARTAN/753-854               ...........................................................fhgtelkh-------......----------------------.-...--...--.......------------------...............---........-------..------....-----.---.-H.INLG....KFVKKIESWVSVGNNDGVKSSTRRQLFEPFAIHDRHFLQ-MDHVNHVTNIARKRAYQCKRVREVAFDFCDGLA..Q...NG....II..DATKYV.L------------------------------lqwhn.........
A0A075DMR3_9VIRU/7-219                 .................................................................er--SEMRR......EVDALLITKFKPQVKQGQQFSD.A...AQ...AFl.....kEMIFGNIALKGASEQTEFedqevssgwfvpglgGRH........GQMDPEKefPGEENK....ALRDG.AYR.FK.VNFF....SLVQSLIALLRGSNNVFVNNKPFRRLCVAYASEAKAYLEAKKVDGEFSNLVLKMPATCKHAPEVCFDFNEGLD..V...LR....LT..DVQAQT.MQRLSRRLFATELKKRESE------------rsvadhigd.....
Q9IMS7_9VIRU/7-193                     ................................................................ltn---KIHT......ELIAFLSQANRPL--HQRSEPE.K...KL...IL.......RSIFANIAIQGTSDSTEF...............IS-........--TT---..VQVMRP....TGA--.EAL.VS.YNPR....TIVGLIKLFASTNEDENISRSTFRQICEHFAEYAKNGLIALKLLREYTNLYRKAPSLGGKYPELCFDFNGGLD..M...ID....LN..NEQRKV.ITNFNQRLLQTEIAKGEAEANMSAVSTNLCV..............
A0A288XSD9_9VIRU/6-197                 ...............................................................rrdq----MRE......VIKTLLLTGATPVENADDQGYD.V...PM...YL.......ETIFGYIAITGTSKKA--...............EHY........GEVDILG..PKTNRD....-NIDS.R--.GK.VDIG....LCVRKMLSLSATARMPPAAKATLRQMCEPFAHEAYVFLTRGAALGIFTQLAVKIARLGNKEPQVMFDFNSGLD..L...TS....LT..LQEATV.IQGLNSRLFRTEGAKNVFNAQASVGEQASE-v.............
#=GC seq_cons                          ................................................................tht...............................t..t.h...ph...hL.......ctlFGpIAlhGoSpps..............................hsl......hp.t.....t.s..p...hp.hslu....phVpplpshspssspsshpshThRQhC-sFAp-AhpaLtphtt.shhopLscKhPclup+tPpVhFDFssGLs..h...pp....Ls..tsEtpV.IQshppRLF+TEutKuhapAp.ps.....................
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