GenomeNet

Database: Pfam
Entry: TsiV3
LinkDB: TsiV3
Original site: TsiV3 
#=GF ID   TsiV3
#=GF AC   PF20889.1
#=GF DE   Antitoxin TsiV3
#=GF AU   Lazaro Pinto Beatriz;0000-0001-6837-2941
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF AU   Chuguransky S;0000-0002-0520-0736
#=GF SE   ECOD:632.20.1
#=GF GA   28.40 28.40;
#=GF TC   28.90 101.60;
#=GF NC   28.00 27.60;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 --cpu 4 -E 1000 HMM pfamseq
#=GF TP   Family
#=GF RC   Paper describing PDB structure 4noo
#=GF RN   [1]
#=GF RM   24699653
#=GF RT   Molecular mechanism for self-protection against the type VI
#=GF RT   secretion system in Vibrio cholerae.
#=GF RA   Yang X, Xu M, Wang Y, Xia P, Wang S, Ye B, Tong L, Jiang T, Fan
#=GF RA   Z;
#=GF RL   Acta Crystallogr D Biol Crystallogr. 2014;70:1094-1103.
#=GF RC   Paper describing PDB structure 4nso
#=GF RN   [2]
#=GF RM   24751834
#=GF RT   Structural basis for recognition of the type VI spike protein
#=GF RT   VgrG3 by a cognate  immunity protein.
#=GF RA   Zhang J, Zhang H, Gao Z, Hu H, Dong C, Dong YH;
#=GF RL   FEBS Lett. 2014;588:1891-1898.
#=GF RN   [3]
#=GF RM   24348240
#=GF RT   Dual expression profile of type VI secretion system immunity
#=GF RT   genes protects pandemic Vibrio cholerae.
#=GF RA   Miyata ST, Unterweger D, Rudko SP, Pukatzki S;
#=GF RL   PLoS Pathog. 2013;9:e1003752.
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   Antitoxin TsiV3, also known as TsaB, is a immmunity protein from
#=GF CC   Vibrio cholerae that inhibits the activity of toxin VgrG3, a
#=GF CC   protein found in the spike of the type VI secretion system
#=GF CC   (T6SS) syringe- like complex. TsiV3 folds into a three-helix
#=GF CC   bundle and adopts a dimeric assembly to bind the deep
#=GF CC   active-site groove of the catalytic domain in the C-terminal
#=GF CC   region of VgrG3, modifying the conformation and preventing
#=GF CC   substrate binding [1-3].
#=GF SQ   6
#=GS A0A023PSF3_VIBCL/32-121  AC A0A023PSF3.1
#=GS A9MJU9_SALAR/40-133      AC A9MJU9.1
#=GS A0A2X4SVP4_SALER/40-133  AC A0A2X4SVP4.1
#=GS A0A0Q2N7S0_VIBFU/32-121  AC A0A0Q2N7S0.1
#=GS I2BAU5_SHIBC/40-133      AC I2BAU5.1
#=GS TSIV3_VIBCH/32-121       AC Q9KN41.1
A0A023PSF3_VIBCL/32-121             .SGVHQKILVCIQNEIAKSETQIRNNISSKSIDYGFP.......DDFYSKQRLAIHEKCMLYINVGGQRGELLMNQCELSMLQGLDIYIQQYIEDVDN
A9MJU9_SALAR/40-133                 n-PMSTE---CIDAEINAQNKSIDSFIGKHGDITSPEdgnivelKLFTDNQRKYIDGKCDLWLKTGGQNGMLLNKQCVLDETISLKKLLSDFVSSVDG
A0A2X4SVP4_SALER/40-133             n-PMSTE---CIDAEINAQNKSIDSFIGKHGDITSPEdgnivelKLFTDNQRKYIDGKCDLWLKTGGQNGMLLNKQCVLDETISLKKLLSDFVSSVDG
A0A0Q2N7S0_VIBFU/32-121             .SGDHQEMILCIQNETASVESQVKKIVSESGEYYGIY.......KDFYTKQRLAIHEKCSLYINLGGQRGELFMAQCELDGVISLELFVKQYTDDLDN
I2BAU5_SHIBC/40-133                 .DPMSTT---CIDSELNTQDGLINSFIGKHRDITSPEdgnpidlKSFAGSQRKLIDEKCDLWLKAGGQNGVLLSKQCILDETISLKNMLTDFVRSVDG
TSIV3_VIBCH/32-121                  .SGVHQKILVCIQNEIAKSETQIRNNISSKSIDYGFP.......DDFYSKQRLAIHEKCMLYINVGGQRGELLMNQCELSMLQGLDIYIQQYIEDVDN
#=GC seq_cons                       .sshppc...CIpsEIssp-spIcshIuc+u-hhu.........KsFhspQRhhIcEKCsLalpsGGQpG.LL.pQC.LDtsISLchhlppalcsVDs
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