GenomeNet

Database: Pfam
Entry: V18-19
LinkDB: V18-19
Original site: V18-19 
#=GF ID   V18-19
#=GF AC   PF21507.1
#=GF DE   Sputnik minor capsid protein V18/19
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF AU   Chuguransky S;0000-0002-0520-0736
#=GF SE   ECOD:EF15893
#=GF GA   27.00 27.00;
#=GF TC   98.30 44.50;
#=GF NC   20.60 20.00;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF RC   Paper describing PDB structure 3j26
#=GF RN   [1]
#=GF RM   23091035
#=GF RT   Structure of Sputnik, a virophage, at 3.5-A resolution.
#=GF RA   Zhang X, Sun S, Xiang Y, Wong J, Klose T, Raoult D, Rossmann MG;
#=GF RL   Proc Natl Acad Sci U S A. 2012;109:18431-18436.
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This entry includes Sputnik virus minor capsid proteins, such
#=GF CC   V19. Sputnik  is a dsDNA virus, referred to as a virophage, that
#=GF CC   is coassembled with Mimivirus in the host amoeba [1]. It is an
#=GF CC   icosahedral virus and its capsid contains a major protein (V20)
#=GF CC   and two minor proteins (V18/19). Proteins in this entry have a
#=GF CC   single jelly-roll structure [1].
#=GF SQ   18
#=GS V6BPN3_9VIRU/14-365       AC V6BPN3.1
#=GS A0A141HRM7_9VIRU/7-404    AC A0A141HRM7.1
#=GS I0CES9_9VIRU/16-367       AC I0CES9.1
#=GS A0A6G6XMR5_9VIRU/15-439   AC A0A6G6XMR5.1
#=GS A0A6G6XMH6_9VIRU/17-432   AC A0A6G6XMH6.1
#=GS I0CEQ9_9VIRU/16-367       AC I0CEQ9.1
#=GS A0A0R5K527_9VIRU/14-390   AC A0A0R5K527.1
#=GS A0A6G6XMD6_9VIRU/16-406   AC A0A6G6XMD6.1
#=GS A0A6G6XNK4_9VIRU/9-422    AC A0A6G6XNK4.1
#=GS A0A6G6XMH7_9VIRU/17-416   AC A0A6G6XMH7.1
#=GS A0A0A0RL97_9VIRU/9-374    AC A0A0A0RL97.1
#=GS V18_SPTNK/16-167          AC B4YNF8.1
#=GS A0A0A0RK57_9VIRU/254-472  AC A0A0A0RK57.1
#=GS V19_SPTNK/2-207           AC B4YNF9.1
#=GS A0A0A0RK57_9VIRU/22-211   AC A0A0A0RK57.1
#=GS A0A0A0RJU7_9VIRU/13-370   AC A0A0A0RJU7.1
#=GS F2Y0L4_9VIRU/7-386        AC F2Y0L4.1
#=GS A0A6G6XMN1_9VIRU/7-404    AC A0A6G6XMN1.1
V6BPN3_9VIRU/14-365                  .........................................................VYYDI.VIPYNP...NDSGL--.SP-ATFQAQLTQPLLYNPDKYYLSVVRFSIPTQ.Y..VPLMIPEIQ..PF-PNTN--V-NNTIYSVTLEY.....N......GVF..SS............QTF....VQYDVSLTN....P...ND.TPPPPPTINNRTVE-PTAYYYVYNFSPFLQMINKALSDAF............TEI---.------..TM.........P...V...G.A.VAPYFVY...SPVTQRISLV...........A.-..QRQ.F.....Y...DRNL............AQ.............PIR...IYCNEALFPFLDGI-.-P..FGGL...D...FN..S.V.D.G..RDI--LFNVEN.--LGN.....---NLV---Q.NQ.....LTAPAYPPE...FIQMEQEYATLSN.WNAIKTIQLVSNLLPINRE---..FIPSF..RNT....N.V.....GVVNS....QGI.LAD.F.V.PLVT.LGPESR..TSIDYVANGPW.-.-RLIDMF.GGVPITMVDLSVYWTDQIGRRFV-LDVPRGRIATCKLIFIK.....................
A0A141HRM7_9VIRU/7-404               .........................................................VYYDLdVVNTITpslTTSQTAQ.PNRLTFTEVRSSPILDNPSDYFLSIIRFSLDTAgS..MPLFIPQIE..LQ-NAVGPTPWNNTVYYVSVEY.....NppatpaNRL..IS............KKR....VIYVPQSN-....I...YD.PPAVVPA---TLNEATEPYYWVNNIQAFICMINEALKDAY............ADIIAQ.ATAGGI..VL.........PatwI...A.G.NEPYLLW...NAERSIATLV...........A.Q..ADI.F.....A...QDCL............GV.............GTAegfVYFNNPLFTLFSSFQ.SI..HNYT..yD...PNpaS.V.N.D..GEANYLIKVFN.-KKGG.....VGNNYV---A.TD.....ATA-GPPYN...ALYMEQPYSTGAT.LCPIQSLVFTTTLLPVLPQLIG..IPRIL..SNN....N.G.....SVGQN....DNL.SNE.I.T.DLVV.NLTNGT..EYFPNVLYLPT.AeYRLIDLQ.SNSPLYGIQISVAWKDVYGI-YHDFYLQYGCSCSLKIMFRK.....................
I0CES9_9VIRU/16-367                  .........................................................VYYDI.LIPFKP...NDQGF--.SP-AIFQAQLTQPIVHNPSEYFLSVVRFSIPTQ.N..IPLTIPQIQ..PY-PNTN--V-NNTIYSVSIGY.....N......GTY..SS............QNF....VQFDPSLTS....P...NI.PAPNAPTVTSPNVE-VTPYYYIYDYSTFLQMINTALENAF............NEI---.------..SA.........P...V...G.A.DAPFFFY...DSNTEKISLI...........A.-..QAA.Y.....Y...DRTL............TT.............PIE...IYCNVNLFTFFDSI-.-K..HIGL...G...YN..T.P.T.G..RDI--LFDVRF.--LGN.....---NYY---Q.DP.....ETAPSYPPE...FIQMQQEYPTLSN.WNAVKTIQLVSNLLPINKE---..SIPSF..RNS....N.V.....GIINA....QGI.LAD.F.V.PLVT.NGPEAR..ISIDFVATGPW.-.-RLIDMF.GSVPIYMVDLYVYWTDQTGGQYL-INIPPGRILTCKLVFIK.....................
A0A6G6XMR5_9VIRU/15-439              .....................................................lyyd--INV.VSDYNP...TLVGTTA.PP-LTFNEIRQNPIIKYPEDYLLSVVRFSIETP.T..LPIFIPQVL..LGQPNPNKL-----IYAWGMSV.....T......DYS..AV............GTP....TYYLPAQENwiyiP...DDlTIPPPQ-GALTFQDLTTEYYYVNEFSLILQYANNALKAAF............DNFNTY.LTGIGQ..PTlgafggvpaN...I...A.QnYCPQMTY...DPRGELFSLSfplcppalagaA.PpfAYD.T.....Y...DQNL............ANtag......fagrVIK...LYMNTPLSNLLNSFP.TV..FQGN..qQ...FQ..L.T.TgT..EDMIVVYNNQY.-QNTN.....GGSRPTYPLTpVA.....STVAAIP--...QIIVPQEHSTTIL.FSPISSLVFSTSLLPVQNTLLSkpAIFNF..YDGvtssN.L.....RSSGN....NNV.TAP.VlT.DFEL.QGATGT..SSQTRITYTPT.AeYRMLDLR.GTTPVNAVEVSVFWKDKFSGLHR-FNLAAGCAASIKILFRR.....................
A0A6G6XMH6_9VIRU/17-432              .........................................................IYYDI.NVFNND...TT-GTRR.PPYLQFSEVRNTPYLANPSDYFASVVRFSVETP.T..LPVIIPQ--..PA-VNGA-SV-NELIYVVSMNH.....P......ALI..AP............FSF...pVQYVPQSNS....A...LK.TPPTSI---STVEDVINEYYYTFTYKPFIDMVNTALRACW............VAIRAA.FAAIGS..PL.........N...AiydD.D.SFPYLWW...DEEKNIATWV...........A.P..AQL.FqtpsaN...NQNP............DHtlgglpvvagtisPIS...IFFNTPLFNLFSSFSaFQngYEGV...SplnWR..M.LlP.D..TVTINPYQASV.--FTNnpsaaAASMPTFPTK.QA.....AAFLPTQPNlrsLLRVSQEYPTTPL.WNPVQSIVFTTSLLPIAPSIVS..TPVLF..GAG....T.Af...sTAGNNs.giANI.LTD.LeV.PLE-.KGWENK..PSINYVPTAEY.-.-RLFDLN.GNAPLNAIEISVNWKDNFG-RLNPIRLGSGCSASIKIMFRR.....................
I0CEQ9_9VIRU/16-367                  .........................................................VYYDI.LIPFKP...NDQGF--.SP-AIFQAQLTQPIVHNPSEYFLSVVRFSIPTQ.N..IPLTIPQIQ..PY-PNTN--V-NNTIYSVSIGY.....N......GTY..SS............QNF....VQFDPSLTS....P...NI.PAPNAPTVTSPNVE-VTPYYYIYDYSTFLQMINTALENAF............NEI---.------..SA.........P...V...G.A.DAPFFFY...DSNTEKISLI...........A.-..QAA.Y.....Y...DRTL............TT.............PIE...IYCNVNLFTFFDSI-.-K..HIGL...G...YN..T.P.T.G..RDI--LFDVRF.--LGN.....---NYY---Q.DP.....ETAPSYPPE...FIQMQQEYPTLSN.WNAVKTIQLVSNLLPINKE---..SIPSF..RNS....N.V.....GIINA....QGI.LAD.F.V.PLVT.NGPEAR..ISIDFVATGPW.-.-RLIDMF.GSVPIYMVDLYVYWTDQTGGQYL-INIPPGRILTCKLVFIK.....................
A0A0R5K527_9VIRU/14-390              .........................................................VYYDI.VVTNFQ...SITTK--.APKLRFNESRTNPIIDKTEDYYMSIVRFSLDTY.N..LPNIICEIQ..PNQADPNLSI-----YSVTLQAllpdgV......GGF..TTt.........evQTF....LNWIPQNRD....I...-P.TPLAPSLTTTGFQMTNTEYYYCYQFQYFLALMNQAFQTCL............VDL-IT.-ATGGG..AS.........P...I...NtA.QQPIILW...DFTSNSAILN...........A.P..SNF.Y.....EvtiDPTV............NP.............IIN...IFFNKPLFALFNSF-.--..-LNI...D...FG..V.S.I.T..NGK-NHQIVID.SYLGT.....--QTIQFPYG.LD.....-----PELE...YTQTFQEFSTIDT.WTPVSSIVFTSNTIPIVSNQLS..APLIF..NDG....Q.I.....VVGDG....NNCnFAQiI.T.DLET.NQQVYK..PQLLYVPTAEY.-.-RRIDLT.GNRPLTNIDIEVYWRDKLGGLNQ-LNLESGGSATIKFLFEK.....................
A0A6G6XMD6_9VIRU/16-406              .........................................................IYFDL.TVTNFQ...STTVA--.PQKFYYNEQRTLPFVNVPEDYYLSILRFTVETG.S..LPLFIPSIQ..PASQQAVPADPNLTIYSVALEYedpltN......IVY..TA............QSF....IEWVPQDLG....V...PT.QSTLGS--NGIQVN-DNGYYNCYSYNYWCYLVWRAFQRAFgtgglvpygnanLSLSQQ.LINAGV..AN.........P...-...A.T.YSPFFSW...DSTSNTATIT...........A.-..EFP.Yc...iN...QAVG............VN.............NIG...IYFNAPLFQLFNSF-.-P..ARYL...G...YQ..G.V.T.S..GKN---FRIEL.ANVGG.....LNLTTV---Q.VP.....NSMPVTTWD...GYTLSQEYPTIEN.WSPILAIVFVSNTLPIQPNNVS..TPVVF..NNN....E.Q.....IVLGG....NN-.-AD.T.A.NIITdLVSDTG..NYRPSLVYLPQaQ.YRYVTLY.GNRPLYNLDLSIFYRTKT-GQLIPFSLQSGGSVTVKFAFIK.....................
A0A6G6XNK4_9VIRU/9-422               ....................................................iyydl---DV.VNTFNPs.eNQTQTNQ.LNRLTFTEVRSSPILDNPSDYFLSIVRFSLDTAgS..MPIMLPQID..LDQTLASPDFPNETIYYVSMKY.....D......DGV..NP............PVFqkkrVIFVPQSFT....QtglGG.TPVPP-TYPLNLEKTTSTYYWLNSFQYFVSMVNTALKDCYdl........lyIQINQApYLPLPAdiNT.........G...A...G.A.FIPNYVYmtwNNDDNKATLN...........F.P..QITpF.....Sw.eQSKL...........gTQ.............PAKl.fLYFDNQLYTIFSSFE.AV..LNST...A...LD..PaV.V.GieGDKANYFIQNF.SKYGT.....---NFVKGAT.AN.....TTTGAPPYD...ILQMAQPYSTGAT.LCPIQSLVFNTSLIPILPQLIG..VPRIL..RN-....N.I.....NQGQN....DNI.SNE.I.T.DLVV.NLTRGD..EYFPSVLYLPT.AeYRLIDLN.GNSPISGVQISVQWKDIYG----------------------iyhdfflqnncncsmkimfrr
A0A6G6XMH7_9VIRU/17-416              ........................................................i-FYDL.NIINND...TT-GTRK.PPYLQFTEIRNSPYLMNPSDYFCSVVRFNLETP.S..LPLIVPQVK..LGSADVNDL-----IYSITISH.....P......TLIpnGI............QKF....VQYVPQSSS....I...DY.PPPNTPV---APADIVNEYYYVYSYKPFIDMVNNTLRAAW............VDTLTA.VGALGG..AG.........Y...N...A.T.NFPYLWW...DEQANIATFV...........V.P..QEL.F.....E...MPSPnnptptllgalgAE.............PIQ...IYMNSPLFNLFSSFS.SF..ANGY...T...GQ..A.A.A.G..VVP-STFGRNWrIVFQN.....TVSSDPYTIT.SAgvpqvLPIMYNTKS...YLRVSQEYPTTPL.WNPVQAIVFTTSLLPIAPSLVS..APILY..GQG....Q.IltnagNNSNI....SNI.LTD.LeI.PL-E.KGWETK..PSINYLPTAEY.-.-RLFDLN.GNAPLSAIEISVYWKDSFGAIHQ-FRLATGSNSSLKIMFR-r....................
A0A0A0RL97_9VIRU/9-374               ..............................................vfdlevnlssl-----.------...NNSSLN-.--AITTTVNRLQAIVQNPSDYYVSVSRFICNTQ.Q..IPLWDPVIN..ITSPNND---GYNTIYSVYLTY.....G......-LY..AS............Q-Q....VYLRVINTN....S...TY.TAPQTP-----TTQPTNAWGYVYSYNIIAQMINTALATAY............TQL---.LAAVAG..SL.........P...M...D.A.NPPYVSW...NPTTQLFTMN...........GfP..MSQ.Y.....D...QSTG............DD.............VVE...IYFNNSFRQYLLGW-.DI..VGLT...N...TG..N.A.N.G..KDC--LLVLRN.NGINY.....--SPQNSPPT.FL.....PTDPT--TT...TLQYSQNCQTFFA.YATLAKLQIIA-SLPIAFPTQA..ALPLD..QVG....T.V.....GNDLQ....IPM.LCD.F.V.VNYS.NSTSSGfcQPISYFPALDS.Y.SSPIQLC.GGTQLNSFTIGITWTN-IEGQSFPLEAFGTVVASIKLTFT-h....................
V18_SPTNK/16-167                     .........................................................VYYDI.LIPFKP...NDQGF--.SP-AIFQAQLTQPIVHNPSEYFLSVVRFSIPTQ.N..IPLTIPQIQ..PY-PNTN--V-NNTIYSVSIGY.....N......GTY..SS............QNF....VQFDPSLTS....P...NI.PAPNAPTVTSPNVE-VTPYYYIYDYSTFLQMINTALENAF............NEI---.------..SA.........P...V...G.A.DAPFFF-...----------...........-.-..---.-.....-...----............--.............---...---------------.--..----...-...--..-.-.-.-..-----------.-----.....----------.--.....---------...-------------.----------------------..-----..---....-.-.....-----....---.---.-.-.----.------..-----------.-.-------.-----------------------------------------l....................
A0A0A0RK57_9VIRU/254-472             altspqfrlffntnmfglftnylntyyntllpidgwqdgltypvqpgyvneiqfpnk-----.------...-------.---------------------------------.-..---------..----------------------.....-......---..--............---....---------....-...--.----------------------------------------............------.------..--.........-...-...-.-.-------...----------...........-.-..---.-.....-...----............--.............---...---------------.--..----...-...--..-.-.-.-..-----------.-NYTN.....VLNHET--AA.AD.....YVPAPDNVR...YWINTQEYKSIDTlWSPISSIVFTSTLLPIKSEATG..QPIVFgeQLG....D.S.....SIGNSaptsQSA.FQP.I.ItDLILpMDNGAH..DYRSFVYYAPT.AqYRLTDFApSKQEIRNIDIQVYWKYRLTGELFPINMFNLSSVSIKALFR-n....................
V19_SPTNK/2-207                      ......................................................hhs-----.------...-------.---------------------------------.-..---------..----------------------.....-......---..--............---....---------....-...--.----------------------------------------............------.------..--.........-...-...-.-.----FFY...DSNTEKISLI...........A.-..QAA.Y.....Y...DRTL............TT.............PIE...IYCNVNLFTFFDSI-.-K..HIGL...G...YN..T.P.T.G..RDI--LFDVRF.--LGN.....---NYY---Q.DP.....ETAPSYPPE...FIQMQQEYPTLSN.WNAVKTIQLVSNLLPINKE---..SIPSF..RNS....N.V.....GIINA....QGI.LAD.F.V.PLVT.NGPEAR..ISIDFVATGPW.-.-RLIDMF.GSVPIYMVDLYVYWTDQTGGQYL-INIPPGRILTCKLVFIK.....................
A0A0A0RK57_9VIRU/22-211              .........................................................IYYNAdIINAGF...SDTGLAVpDPQIRFNETRDTSLIKDASQYNFSIIRFGMNGA.NldLPLFIPQVQldPF-PFVGDT-TNLTTYGVALAF.....Q......QTF..ATnlgnrtitlappETF....VIYESETKN....E...RL.APLPRKPTTAGGQDLSSRYYWVYTYQHWLDLCNTALSTAF............NSVFTA.FGVAWA..AL.........G...V...A.T.PN-----...----------...........-.-..---.-.....-...----............--.............---...---------------.--..----...-...--..-.-.-.-..-----------.-----.....----------.--.....---------...-------------.----------------------..-----..---....-.-.....-----....---.---.-.-.----.------..-----------.-.-------.-----------------------------------------pyptlasfsa...........
A0A0A0RJU7_9VIRU/13-370              .........................................................VYYDM.VISNLN...NTNSK--.PPFAYYNENRSSPIVYDPYKYDLIIARWQLDTN.Y..LPIFIPLIQ..SSSIDPN-----LTIYSITLEY.....S......GTI..GN............PAY....VSFAPQNLV....A...SV.PLAPFYT-TNKLQDNSQGYYDIYTYQYWIYLVNVCFQQAY............TNLDT-.--AYAP..AL.........P...-...S.S.FAPVMTW...DTQNNIGIIN...........A.D..VLG.Y.....-...---G............VG.............GIK...VYFNQALSQLFSSFP.FT..--IN...S...FN..D.A.Y.N..RNF--QLQINS.FSVAN.....---QADYPSF.G-.....----ASDFT...AYQLFQEFSTISA.WNPVLSIVLVSNTLPIVPNNEG..VPSLI..VNG....IyQ.....QQSGN....NNI.QSQ.V.I.TDFV.ADGIYK..PIITYIPSGEY.-.-RRLSLV.GDKPINNIDITVMYKDRLG-RLNPVLLPAGCSASIKFLFEK.....................
F2Y0L4_9VIRU/7-386                   .........................................................VYLNC.LINNID...SNSDFNH.EPHLVFNEDRTSPLITNCENYDMSIANFKVDLK.T..LPVFIPTIK..YSEDDTNESIRNRTIYSITLEY.....G......-GY..AS............TAH....IYFEPQDKT....N...GT.TPPRFK---GGYADYRSGYYNLYNYEFFFVLVNEAVKQAF............IGLQKT.LLEFGQ..SK.........D...I...G.T.DMPYFIF...DKDTGLVFLN...........A.P..ELT.F.....N...DDTP............ND.............VVN...IYLNKPLYRLFNSLP.FT..HELT...T...FE..T.M.T.T..KVTANAYKIKM.SDFGN.....VAENQVFPPQ.SD.....GTIASVKVN...YISVLQDYSTLDT.WSPVESIVVTSNTIPVQSSNTS..ANHSF..QNG....S.E.....TISGS....SN-.---.I.V.ELEL.SDFKAG..TPIPGVIYEPS.Y.PRWINMR.NQSELSNINIEMYYRSKLDGSLIPITISSGGTFSIKLVFRK.....................
A0A6G6XMN1_9VIRU/7-404               .........................................................VYYDLdVVNTITpslTTSQTAQ.PNRLTFTEVRSSPILDNPSDYFLSIIRFSLDTAgS..MPLFIPQIE..LQ-NAVGPTPWNNTVYYVSVEY.....NppatpaNRL..IS............KKR....VIYVPQSN-....I...YD.PPAVVPA---TLNEATEPYYWVNNIQAFICMINEALKDAY............ADIIAQ.ATAGGI..TL.........PatwV...A.G.NEPYLLW...DAQRAIATLV...........A.Q..ADL.F.....A...QDCLg.........vgSA.............EGF...VYFNNPLFTLFSSFQ.SI..HNYTydpT...PA..S.V.N.D..GEANYLIKVFN.-KKGG.....AGNNYVVLD-.--.....-ASAGPPYN...ALYMEQPYSTGAT.LCPIQSLVFTTTLLPVLPQLIG..IPRIL..SNN....N.G.....SVGQN....DNL.SNE.I.T.DLVV.NLVNGT..EYFPNVLYLPT.AeYRLIDLQ.SNSPLYGIQISVQWKDVYGI-YHDFYLQYGCSCSLKIMFRK.....................
#=GC seq_cons                        .........................................................lYYDl.lls..s...ssssh...sP.hhFsE.RopPllpNPs-YalSllRFolsTt.s..lPlhIPpIp...t.ssss....N.TIYuVolpY.....s......shh..us............psa....V.asPpsps........sh.sssss.....sht-.sssYYalYsaphFlphlNpALpsAa............spl.....hshs...sh.........s...h...u.s.stPahha...Dspsphhols...........A....t.h.a.........ppsh............ss.............slp...lYhNssLashFsSh...h..h.hh...s...hp..s.s.s.s..tsh..hhplp....hus........s.s...p.ss......shss.s.p...hlphpQEYsThss.WsPlpoIVhsosLLPItsp..u..s...a..psu....s.h.....shsss....psl..s-.h.s.sLhs.psspup....hshVshtPh....RhlDhh.GssPl.sl-lpVhW+DphGt.hh.hpl.sGsssolKlhFh+.....................
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