GenomeNet

Database: Pfam
Entry: VirE1
LinkDB: VirE1
Original site: VirE1 
#=GF ID   VirE1
#=GF AC   PF12189.12
#=GF DE   Single-strand DNA-binding protein
#=GF AU   Mistry J;0000-0003-2479-5322
#=GF AU   Gavin OL;
#=GF SE   pdb_3btp
#=GF GA   25.00 25.00;
#=GF TC   26.20 75.10;
#=GF NC   24.60 17.70;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 --cpu 4 -E 1000 HMM pfamseq
#=GF TP   Domain
#=GF RN   [1]
#=GF RM   18678909
#=GF RT   Crystal structure of the Agrobacterium virulence complex
#=GF RT   VirE1-VirE2 reveals a flexible protein that can accommodate
#=GF RT   different partners.
#=GF RA   Dym O, Albeck S, Unger T, Jacobovitch J, Branzburg A, Michael Y,
#=GF RA   Frenkiel-Krispin D, Wolf SG, Elbaum M;
#=GF RL   Proc Natl Acad Sci U S A. 2008;105:11170-11175.
#=GF DR   INTERPRO; IPR024237;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This family of proteins is found in bacteria. Proteins in this
#=GF CC   family are approximately 60 amino acids in length. There is a
#=GF CC   conserved IELE sequence motif. VirE1 is an acidic chaperone
#=GF CC   protein which binds to VirE2, a ssDNA binding protein. These
#=GF CC   proteins are virulence factors of the plant pathogens
#=GF CC   Agrobacteria. VirE1 competes for the ssDNA binding site of
#=GF CC   VirE2.
#=GF SQ   5
#=GS A0A2W4DMH6_9HYPH/1-63  AC A0A2W4DMH6.1
#=GS VIRE1_AGRFC/1-63       AC P08063.1
#=GS A0A386E852_9HYPH/1-63  AC A0A386E852.1
#=GS B9K426_AGRVS/1-63      AC B9K426.1
#=GS Q2K2F0_RHIEC/1-63      AC Q2K2F0.1
A0A2W4DMH6_9HYPH/1-63             MAIVKLNPSKSSNSSSPETHREIHQQKKTDNHEPSGFTQLDLDMIALENFVHQCPLPNEDLA-d
VIRE1_AGRFC/1-63                  MVIIKLNANKNMPVLAVEKPQEIHKEELSDHHQSNGFTSLDLEMIELENFVLHCPLPEENLAG.
A0A386E852_9HYPH/1-63             MVIIKLNANKNMPVLAVEKPQEIHKEELSDHHQSNGFTSLDLEMIELENFVLHCPLPEENLAG.
B9K426_AGRVS/1-63                 MAISELNVNKNMPVLSGEEPQKFHMEELSDNYQPNGFTSLDLDMIELENFVLQCPLPEDNLAG.
Q2K2F0_RHIEC/1-63                 MAIIKLNANKTRPVSLPEEPREIHTEAFSINHRSNGFTSLDLEMIELENFVLRCPLPEENLAG.
#=GC seq_cons                     MAIIKLNANKNMPVLusEcPQEIHpEELSDNHQSNGFTSLDLEMIELENFVL+CPLPEENLAG.
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