GenomeNet

Database: Pfam
Entry: YdfZ
LinkDB: YdfZ
Original site: YdfZ 
#=GF ID   YdfZ
#=GF AC   PF14001.10
#=GF DE   YdfZ protein
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF SE   Jackhmmer:B2PLX9
#=GF GA   27.00 27.00;
#=GF TC   31.40 58.70;
#=GF NC   23.10 19.30;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -E 1000 -Z 75585367 HMM pfamseq
#=GF TP   Domain
#=GF CL   CL0010
#=GF RN   [1]
#=GF RM   12084818
#=GF RT   Direct detection of potential selenium delivery proteins by
#=GF RT   using an Escherichia coli strain unable to incorporate selenium
#=GF RT   from selenite into proteins.
#=GF RA   Lacourciere GM, Levine RL, Stadtman TC;
#=GF RL   Proc Natl Acad Sci U S A. 2002;99:9150-9153.
#=GF DR   INTERPRO; IPR017704;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This family of proteins is functionally uncharacterised. This
#=GF CC   family of proteins is found in bacteria. Proteins in this family
#=GF CC   are approximately 70 amino acids in length. There is a conserved
#=GF CC   YDRNRN sequence motif. The E. coli protein has been shown to
#=GF CC   bind selenium [1]. This protein shows structural similarity to
#=GF CC   the KOW motif.
#=GF SQ   56
#=GS I2B8C4_SHIBC/2-65      AC I2B8C4.1
#=GS A0A5Q2K498_9ENTR/2-65  AC A0A5Q2K498.1
#=GS A0A663BE32_9ENTR/2-65  AC A0A663BE32.1
#=GS YDFZ_SHIFL/2-65        AC P64466.1
#=GS A0A0H2W5N5_YERPE/7-70  AC A0A0H2W5N5.1
#=GS A0A3S4E5D0_SALBN/2-65  AC A0A3S4E5D0.1
#=GS A0A1Q8Z3Y3_9ENTR/2-65  AC A0A1Q8Z3Y3.1
#=GS A0A378EIW5_KLEPR/2-38  AC A0A378EIW5.1
#=GS A0A4R1N9X6_9GAMM/3-66  AC A0A4R1N9X6.1
#=GS A0A4R1KF40_9GAMM/3-64  AC A0A4R1KF40.1
#=GS A0A250AXH5_9GAMM/3-66  AC A0A250AXH5.1
#=GS A0A1H4D678_9GAMM/3-66  AC A0A1H4D678.1
#=GS A0A2I5TBV2_SERS3/3-66  AC A0A2I5TBV2.1
#=GS W1DPF9_KLEPN/2-65      AC W1DPF9.1
#=GS A0KET8_AERHH/2-65      AC A0KET8.1
#=GS J9Q802_9CAUD/2-65      AC J9Q802.1
#=GS A0A5R9LD91_9ENTR/2-65  AC A0A5R9LD91.1
#=GS A0A0J8VN83_9ENTR/2-65  AC A0A0J8VN83.1
#=GS A0A5J5G5B1_9GAMM/2-65  AC A0A5J5G5B1.1
#=GS YDFZ_ECO57/2-65        AC P64465.1
#=GS L0M621_ENTBF/2-65      AC L0M621.1
#=GS A0A089PT35_PLUGE/2-65  AC A0A089PT35.1
#=GS A0A097R7V5_HAFAL/2-65  AC A0A097R7V5.1
#=GS A6T8L9_KLEP7/2-65      AC A6T8L9.1
#=GS A0A553ZSR2_9BACI/2-49  AC A0A553ZSR2.1
#=GS H5V2A3_ATLHE/2-65      AC H5V2A3.1
#=GS A0A085U944_YERRU/3-66  AC A0A085U944.1
#=GS A0A845SIH1_9GAMM/3-66  AC A0A845SIH1.1
#=GS YDFZ_ECOLI/2-65        AC P64463.1
#=GS A0A0J2HWH6_9ENTR/2-65  AC A0A0J2HWH6.1
#=GS A0A4Z0L3Z2_SALET/2-65  AC A0A4Z0L3Z2.1
#=GS A0A097R3C8_HAFAL/3-66  AC A0A097R3C8.1
#=GS W1EN84_KLEPN/2-65      AC W1EN84.1
#=GS E0SB73_DICD3/3-66      AC E0SB73.1
#=GS A0A085GBX1_9ENTR/3-66  AC A0A085GBX1.1
#=GS A0A071LRF0_9ENTR/2-65  AC A0A071LRF0.1
#=GS A0A0G4JQH1_9GAMM/1-48  AC A0A0G4JQH1.1
#=GS A0A078LDZ6_CITKO/2-65  AC A0A078LDZ6.1
#=GS D2TIC3_CITRI/12-75     AC D2TIC3.1
#=GS A0A4P7J3E0_9ENTR/2-65  AC A0A4P7J3E0.1
#=GS C4LFP5_TOLAT/3-66      AC C4LFP5.1
#=GS A0A8J7KSD5_9ENTR/3-66  AC A0A8J7KSD5.1
#=GS A0A2X3GBD0_KLUCR/2-65  AC A0A2X3GBD0.1
#=GS Q7CQJ6_SALTY/2-65      AC Q7CQJ6.1
#=GS W1HZ06_KLEPN/2-65      AC W1HZ06.1
#=GS Q32G42_SHIDS/2-65      AC Q32G42.1
#=GS A0A6B2FL30_9ENTR/2-65  AC A0A6B2FL30.1
#=GS A9MRP0_SALAR/23-86     AC A9MRP0.1
#=GS A0A8H9YUC7_9PSED/2-65  AC A0A8H9YUC7.1
#=GS A0A2X4TC73_SALER/2-65  AC A0A2X4TC73.1
#=GS R8AQ63_PLESH/2-65      AC R8AQ63.1
#=GS A0A4P8YKC6_9ENTR/2-65  AC A0A4P8YKC6.1
#=GS A0A0H3GSS5_KLEPH/2-65  AC A0A0H3GSS5.1
#=GS A0A8J7H5C9_9ENTR/3-66  AC A0A8J7H5C9.1
#=GS A0A378B117_KLEPO/1-62  AC A0A378B117.1
#=GS A0A1N6WV80_9GAMM/2-65  AC A0A1N6WV80.1
I2B8C4_SHIBC/2-65                 .MTYDRNHNPITVGSRVMINGTGKTGVIKAIDGQGLDAIRLRRDKTVEVEGVAGRIEPVELIRLG..
A0A5Q2K498_9ENTR/2-65             .MTYDRNRNAITTGSRVMINGTGRTGIIKAIHSTGLDAAQVRRSKTVEVEGCEGKFEPIELIRLG..
A0A663BE32_9ENTR/2-65             .KTYDRNRNAIATGSMVMIAGNGTTGVIKAIHGEGKTAEQLRRADCVEIDGCEGRFCPLDLIRLG..
YDFZ_SHIFL/2-65                   .TTYDRNRNAITTGSRVMVSGTGHTGKILSIDTEGLTAEQIRRGKTVVVEGCEEKLAPLDLIRLG..
A0A0H2W5N5_YERPE/7-70             .KVYDRNRNQIVPGQRVMIAQSGVIDVAKAIHADGMSAVQAEREKVVELLHTGERHVPFDLVRLG..
A0A3S4E5D0_SALBN/2-65             .MTYDRNRNAITTGSRVMISGTGHTGIIKAIESEGLDAGQIRRGKTVIVEGCEGKFAPVELIRLG..
A0A1Q8Z3Y3_9ENTR/2-65             i-TYDRNRNPITNGSQVMINGTGKTGKIIAIHATGLTPAQLRRNKTVEVEGTEGKFEPVELIRLG..
A0A378EIW5_KLEPR/2-38             .KTYDRNRNAIATGSMVMIAGNGTTGVIKAIHGEGE-----------------------------nr
A0A4R1N9X6_9GAMM/3-66             h-VYDRNRNAIIPGQKVMIAATGETSIAKAVHAEGLSPVEAERAKCVELQNTAERYIPFELIRL-a.
A0A4R1KF40_9GAMM/3-64             .KVYDLYHNELQPGQRVLIRETGEIDQIEKISADNLSSYAAEHNQCVQLK--QGVCAPIDIARLG..
A0A250AXH5_9GAMM/3-66             .TVYDRYRNRIAPGCKVMDSETGKIGVIASIHQNGMEQDQARRANCVELKGINGLFKPENLMGLG..
A0A1H4D678_9GAMM/3-66             t-AYDRYRNPLSIGCRVMQDGSRAVGTVAAIHVENLKREEVRKAKCVELKGLNGFFAPEELMRLG..
A0A2I5TBV2_SERS3/3-66             t-AYDRYRNPLNPGCRVMQNGSHLVGTIAAIHDEKLKREEVRKAKCVELKNVDGYFAPEELMRLG..
W1DPF9_KLEPN/2-65                 .KTYDRNRNAIATGSMVMIAGNGTTGVIKAIHGEGKTAEQLRRADCVEIDGCEGRFCPLDLIRLG..
A0KET8_AERHH/2-65                 .KIYDRNRNALTPGQRVMIAATGAVDFLKEAHTDNLTPYQAEHEKCVLLANSREQYAPIELIRLG..
J9Q802_9CAUD/2-65                 .KTYDRNRNVITAGSRVMVATNGATGVIKEICGEGKSEEQLRRSDCVSIEGVEGLFCPMDLVRLG..
A0A5R9LD91_9ENTR/2-65             v-TYDRNRNPITNGSQVMINGTGKTGRIIAIHSNGLTPAQLRRNKTVEVEGNEGKFEPVELIRLG..
A0A0J8VN83_9ENTR/2-65             .MTYDRNRNAITTGSRVMVSGTGQTGVITAIHSEGLSAEQVRRAKTVEVEGCEGKFEPVELIRLG..
A0A5J5G5B1_9GAMM/2-65             .TTYDRYRNPIVPGIRVMDSETGLTGTIAAIHADNLDANAARRVKCIELRGVKGLFKPETLMGLG..
YDFZ_ECO57/2-65                   .TTYDRNRNAITTGSRVMVSGTGHTGKILSIDTEGLTAEQIRRGKTVVVEGCEEKLAPLDLIRLG..
L0M621_ENTBF/2-65                 .MTYDRNRNAITTGSRVMINGTGKTGTIKAIKADGMTPAQVRRSKTVEIDGCDGEFEPIELIRLG..
A0A089PT35_PLUGE/2-65             .MTYDRNRNAITTGSRVMINGTGETGTIKAIHADGMNAMQLRRSKTVEITGCSGKYEPVELIRLG..
A0A097R7V5_HAFAL/2-65             .MTYDRNRNAIKVGSRVMVSGTGEIGVITAIHGDNLPSAQIRRSKCVDIDNLSDRYVPTELVRLG..
A6T8L9_KLEP7/2-65                 .KTYDRNRNAIATGSMVMIAGNGTTGVIKAIHGEGKTAEQLRRADCVEIDGCEGRFCPLDLIRLG..
A0A553ZSR2_9BACI/2-49             .TTYDRNRNAITTGSRVMVSGTGHTGKILSIDTEGLTAEQIRRGKTVVV----------------..
H5V2A3_ATLHE/2-65                 .MTYDRNRNSITEGSRVMLNGTGQTGVIRAIHSEGLTAEQVRRQATVEVEGIENYVAPVDLIRLG..
A0A085U944_YERRU/3-66             .KVYDRNRNQIRPGQRVMVAQSGRIDVATAIHADGLSDIQAERAKCVELQQAGERYVPFELVRLG..
A0A845SIH1_9GAMM/3-66             q-VYDRNRNAIIAGQKVMIAATGELSVAQAIHAEGLPAAKAERANCVELKGKPERFIPYELIRL-a.
YDFZ_ECOLI/2-65                   .TTYDRNRNAITTGSRVMVSGTGHTGKILSIDTEGLTAEQIRRGKTVVVEGCEEKLAPLDLIRLG..
A0A0J2HWH6_9ENTR/2-65             n-TYDRNRNAIATGSMVMVADSGATGVIKAIHAEGKTAEQLRRADCVEIDGHQGLYCPLNLIRLG..
A0A4Z0L3Z2_SALET/2-65             .MTYDRNRNAITTGSRVMISGTGHTGIIKAIESEGLDAGQIRRGKTVIVEGCEGKFAPVELIRLG..
A0A097R3C8_HAFAL/3-66             i-AYDRNRNPLRVGAHVIENGTRRVMVIAAINDEKLAREKVRAAKCVLCHGDSNAYAPQDLILLG..
W1EN84_KLEPN/2-65                 .KTYDRNRNAIATGSMVMIAGNGTTGVIKAIHGEGKTAEQLRRADCVEIDGCEGRFCPLDLIRLG..
E0SB73_DICD3/3-66                 t-AYDRYRNPLDTGCRVMQNGSHLVGTIAAIHAENLPQDEVRHARCVELKGVNGYFAPEELMRLG..
A0A085GBX1_9ENTR/3-66             l-TYDCYRNAISTGSRVMVFNKGLTGVIKAIHGEGKSAEQIRRSQCVEIEGCEGVFCPMELVRL-e.
A0A071LRF0_9ENTR/2-65             .MTYDRNRNVITTGSRVMINGTGLTGVIKAIHADGLSARDLRRQATVEVDGADGQFAPVELIRLG..
A0A0G4JQH1_9GAMM/1-48             .----------------MQSDSRLVGTIAAIHTENLKREEVRRSKCVELKGVKGYFAPQELMCL-s.
A0A078LDZ6_CITKO/2-65             i-TYDRNHNPITNGSRVMINGTGRTGKIVAIHSNGLTPAQLRRNKTVEVEGCEGQFEPVELIRLG..
D2TIC3_CITRI/12-75                .MTYDRNRNAITTGSRVMISGTGHTGRITAIMTDGLDAAQIRREKTVEVEGCEGKFAPVELIRLG..
A0A4P7J3E0_9ENTR/2-65             .KTYDRNRNAITTGSRVMISDTGITGRIKAIDSEGLTAEQIRRGKTVEIEGCEGKYAPLELIRLG..
C4LFP5_TOLAT/3-66                 .KIYDRNRNLLSAGQRVMIVGTGEIDVLETALTDGLTSSQAERSKCVLLTHAQERYAPIELVKLG..
A0A8J7KSD5_9ENTR/3-66             t-AYDRYRNPLETGCRVMQNGSRLAGTIAAIHADKLKREDVRKTKCVQLNGVSEYFSHDELMRLG..
A0A2X3GBD0_KLUCR/2-65             .KTYDRNRNAITIGSHVMIANNGATGVIRSIHGEGKTAEQLRRSDCVEIEGCDGTYCPLELIRLG..
Q7CQJ6_SALTY/2-65                 .MTYDRNRNAITTGSRVMISGTGHTGIIKAIESEGLDAGQIRRGKTVIVEGCEGKFAPVELIRLG..
W1HZ06_KLEPN/2-65                 .KTYDRNRNAIATGSMVMIAGNGTTGVIKAIHGEGKTAEQLRRADCVEIDGCEGRFCPLDLIRLG..
Q32G42_SHIDS/2-65                 .TTYDRNRNAITTGSRVMVSGTGHTGKILSIDTEGLTAEQIRRGKTVVVEGCEEKLAPLDLIRLG..
A0A6B2FL30_9ENTR/2-65             .MTYDRNRNPITTGSRVMVNGSRQTGVITAIHGDGISAQQLRRTKTVEVSGCDGQFEPVELIRLG..
A9MRP0_SALAR/23-86                .MTYDRNRNAITTGSRVMISGTGHTGIIKAIESEGLDAGQIRRGKTVIVEGCEGKFAPVELIRLG..
A0A8H9YUC7_9PSED/2-65             .MTYDRNRNAITTGSRVMINGTGRTGRITAIHTDGLTPAQVRRGKTVEVEGCEGKFEPVELIRLG..
A0A2X4TC73_SALER/2-65             .MTYDRNRNAITTGSRVMISGTGHTGIIKAIESEGLDAGQIRRGKTVIVEGCEGKFAPVELIRLG..
R8AQ63_PLESH/2-65                 .KTYDRNRNAITIGSYVMVAESGATGVIKNIDDQGKSEEQVRRANCVSIDGIDGVFCPLELIRL-k.
A0A4P8YKC6_9ENTR/2-65             .MTYDRNRNSITTGSRVMINGTGQTGVITAIHGDGMTPGDLRRSKTVEVEGCEGQYQPVELIRLG..
A0A0H3GSS5_KLEPH/2-65             .KTYDRNRNAIATGSMVMIAGNGTTGVIKAIHGEGKTAEQLRRADCVEIDGCEGRFCPLDLIRLG..
A0A8J7H5C9_9ENTR/3-66             t-AYDRYRNPLETGCRVMQNGSRLVGTIAAIHADKLKREDVRKAKCVQLNGVSEYFSPDELMRLG..
A0A378B117_KLEPO/1-62             m---DRNRNAIATGSMVMIAGNGTTGVIKAIHGEGKTAEQLRRADCVEIDGCEGRFCPLDLIRLG..
A0A1N6WV80_9GAMM/2-65             .KIYDRNRNALTIGQRVMIAATGTVDYLKEAHTDNMTAYQAEHEKCVQLEHAEERFAPIELIRLG..
#=GC seq_cons                     .hTYDRNRNAIssGSRVMluGTGpTGsIpAIHu-GLoutQlRRuKsVEl-Gs-GpFsPlELIRLG..
//
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