#=GF ID YebF
#=GF AC PF13995.10
#=GF DE YebF-like protein
#=GF AU Bateman A;0000-0002-6982-4660
#=GF SE Jackhmmer:B2PQW6
#=GF GA 27.00 27.00;
#=GF TC 29.30 29.00;
#=GF NC 26.60 26.30;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch -Z 75585367 --cpu 4 -E 1000 HMM pfamseq
#=GF TP Domain
#=GF CL CL0320
#=GF RN [1]
#=GF RM 16369539
#=GF RT Extracellular accumulation of recombinant proteins fused to the
#=GF RT carrier protein YebF in Escherichia coli.
#=GF RA Zhang G, Brokx S, Weiner JH;
#=GF RL Nat Biotechnol. 2006;24:100-104.
#=GF RN [2]
#=GF RM 2820942
#=GF RT Sequence, expression, and localization of the immunity protein
#=GF RT for colicin M.
#=GF RA Olschlager T, Braun V;
#=GF RL J Bacteriol. 1987;169:4765-4769.
#=GF RN [3]
#=GF RM 21037007
#=GF RT X-ray structure and site-directed mutagenesis analysis of the
#=GF RT Escherichia coli colicin M immunity protein.
#=GF RA Gerard F, Brooks MA, Barreteau H, Touze T, Graille M, Bouhss A,
#=GF RA Blanot D, van Tilbeurgh H, Mengin-Lecreulx D;
#=GF RL J Bacteriol. 2011;193:205-214.
#=GF DR INTERPRO; IPR025603;
#=GF DR SO; 0000417; polypeptide_domain;
#=GF CC The YebF-like protein family appears to be a group of colicin
#=GF CC immunity proteins. As well as YebF the family includes cmi, the
#=GF CC colicin M immunity protein [1]. This domain family is found in
#=GF CC bacteria, and is approximately 80 amino acids in length. The
#=GF CC alignment contains two conserved cysteine residues that form a
#=GF CC disulphide bond in the solved structure [3].
#=GF SQ 59
#=GS A0A4R3Z408_9GAMM/171-259 AC A0A4R3Z408.1
#=GS A0A2A2GX25_9GAMM/34-122 AC A0A2A2GX25.1
#=GS H5UWQ0_ATLHE/24-112 AC H5UWQ0.1
#=GS D4E590_SEROD/28-116 AC D4E590.1
#=GS A0A0J8Y6F8_9ENTR/26-114 AC A0A0J8Y6F8.1
#=GS A9MNF0_SALAR/39-127 AC A9MNF0.1
#=GS A0A4R6ELV4_9ENTR/19-107 AC A0A4R6ELV4.1
#=GS A0A2X4TB37_SALER/27-115 AC A0A2X4TB37.1
#=GS W1ISW8_9GAMM/32-120 AC W1ISW8.1
#=GS A0A2I8Q5L5_9ENTR/25-113 AC A0A2I8Q5L5.1
#=GS A0A068QUA9_9GAMM/32-120 AC A0A068QUA9.1
#=GS D2TMT5_CITRI/27-115 AC D2TMT5.1
#=GS A0A1J7C468_9GAMM/1-88 AC A0A1J7C468.1
#=GS A0A4P7J576_9ENTR/27-115 AC A0A4P7J576.1
#=GS A0A4Q1BDN2_9GAMM/34-122 AC A0A4Q1BDN2.1
#=GS A0A6B2FSV9_9ENTR/25-113 AC A0A6B2FSV9.1
#=GS A0A2D0KBB4_9GAMM/34-122 AC A0A2D0KBB4.1
#=GS B4EYB7_PROMH/41-128 AC B4EYB7.1
#=GS A0A859PQ10_9ENTR/30-118 AC A0A859PQ10.1
#=GS A0A085U679_YERRU/30-118 AC A0A085U679.1
#=GS A0A0N0Z8H4_9GAMM/33-120 AC A0A0N0Z8H4.1
#=GS A0A097R2Q5_HAFAL/28-116 AC A0A097R2Q5.1
#=GS A0A090V0H4_PSEVU/25-113 AC A0A090V0H4.1
#=GS A0A240C625_SERFI/28-116 AC A0A240C625.1
#=GS D2TVU7_9GAMM/34-121 AC D2TVU7.1
#=GS A0A078L8K9_CITKO/28-116 AC A0A078L8K9.1
#=GS A0A250B6S9_9GAMM/30-118 AC A0A250B6S9.1
#=GS A0A1X0WJ43_9GAMM/25-112 AC A0A1X0WJ43.1
#=GS YEBF_PHOLL/33-121 AC Q7N3M3.1
#=GS YEBF_YERPE/27-115 AC Q8ZFD5.2
#=GS A0A3S4EK92_SALBN/27-115 AC A0A3S4EK92.1
#=GS L0MAQ4_ENTBF/31-116 AC L0MAQ4.1
#=GS A0A4Z0KC93_SALET/27-115 AC A0A4Z0KC93.1
#=GS YEBF_SALTY/27-115 AC Q8ZNW7.1
#=GS A0A0L0APS1_9ENTR/29-117 AC A0A0L0APS1.1
#=GS A0A085GAS2_9GAMM/30-118 AC A0A085GAS2.1
#=GS D3VDR9_XENNA/32-120 AC D3VDR9.1
#=GS W0HW55_9GAMM/193-281 AC W0HW55.1
#=GS E3G3M6_ENTLS/19-107 AC E3G3M6.1
#=GS D3V1Z0_XENBS/33-121 AC D3V1Z0.1
#=GS YEBF_ECO57/28-116 AC Q8XCK0.3
#=GS A0A248KKL9_9ENTR/30-109 AC A0A248KKL9.1
#=GS C0ARE0_9GAMM/39-126 AC C0ARE0.1
#=GS A0A845SGV0_9GAMM/155-242 AC A0A845SGV0.1
#=GS A0A859PQ39_9ENTR/33-120 AC A0A859PQ39.1
#=GS A0A3B0IRR8_9GAMM/31-105 AC A0A3B0IRR8.1
#=GS YEBF_ECOLI/28-116 AC P33219.2
#=GS A0A370R524_9GAMM/27-115 AC A0A370R524.1
#=GS A0A4R1N708_9GAMM/189-276 AC A0A4R1N708.1
#=GS YEBF_SHIFL/28-116 AC Q83KS1.4
#=GS K8W8T1_9GAMM/31-118 AC K8W8T1.1
#=GS J7SK57_MORMO/37-124 AC J7SK57.1
#=GS A0A071LSK4_9ENTR/28-116 AC A0A071LSK4.1
#=GS T0P0Y0_PHOTE/33-121 AC T0P0Y0.1
#=GS A8AFJ9_CITK8/50-138 AC A8AFJ9.1
#=GS A0A1B7K464_9GAMM/31-118 AC A0A1B7K464.1
#=GS A0A085GDV7_9GAMM/36-124 AC A0A085GDV7.1
#=GS W1J961_9GAMM/32-120 AC W1J961.1
#=GS YEBF_SHIDS/28-116 AC Q32HB5.2
A0A4R3Z408_9GAMM/171-259 ..........k-TSKVAACPDLNAPQVAELIKQDYTQNRFQRSDEDKTALGGANIITSINPEEITGIGDVWQAILHIRGQTADRNYGVTLDCQKGEITYS.
A0A2A2GX25_9GAMM/34-122 ...........RTAKFINCDNLNPQQIGAKVKNDFIQTRLPYWNKDKKLLGGSNVVAWINNNSITAIKHGYRIPLSVRGTKKDVSYQVIVNCQNETITYQ.
H5UWQ0_ATLHE/24-112 ...........RSVKFTGCEGLDAKGISASVKRDYLQNRIARWADDQEKLGQADPVAWVNPDAVKGSDDKWTVPLTVRGMRADIHYTVQVDCKKQTAEY-r
D4E590_SEROD/28-116 ...........RSAKVAQCSGLQAADVAAQVKRDFLQNRITRWDADKKQLGTATPIVWVSPDAIVGKDNVWQVPLTVRGSKTDKIYNVTLNCNQGEIAYS.
A0A0J8Y6F8_9ENTR/26-114 ..........r-EVSFPKCEGANAQTLAASVKRDYLQNRIVRWADDQKTLGQADPVAWINSKEITGKDDKWRVPLTVRGKNRDIHYSVTVDCKAGKAHYQ.
A9MNF0_SALAR/39-127 ...........KSVKFPQCEGLDAAGIAASVKRDYQQNRIVRWADDQKKVGQADPVAWVNVQDVVGQNDKWTVPLTVRGKSADIHYQVSVDCKAGTAEYK.
A0A4R6ELV4_9ENTR/19-107 ..........k-TVSISKCEGLDADGIAATVKQDYTQNRINQWADDQKTLGQIDPVAWINPHDVTGKKDKWKVPLTVRGTNTDLHYVVTVDCAAGSATY-r
A0A2X4TB37_SALER/27-115 ...........KSVRFPQCEGLDAAGIAASVKRDYQQNRIVRWADDQKKVGQADPVAWVNVQDVVGQNDKWTVPLTVRGKSADIHYQVIVDCKAGTAEY-r
W1ISW8_9GAMM/32-120 ...........RVAKFISCENLTKDQVAAQVKQDFLQNRINHWEKDRKQLGTSKPIAWVNVNDIIGDQNVLQVPLNVRGSKKDKSYNVTIDCHEGTISYS.
A0A2I8Q5L5_9ENTR/25-113 ...........KAVKFPSCGGMNAEGIAASVKRDYLQNRIVRWADDQKKLGQADPVAWVTPKDIRGKNDQWDVPLTVRGKSTDIHYLVKIDCKAGKAEYQ.
A0A068QUA9_9GAMM/32-120 ...........RVAKFISCQNLTKDQVAAQVKQDFLQNRINHWDKDRKQLGTSKPIAWVNVNDITGDANTLQVPLIVRGTKKDKSYNVTIDCQKETISYS.
D2TMT5_CITRI/27-115 ...........KTVTFPRCEGLDADGIAASVKRDYQQNRIARWPDDQKHVGQADPVAWVNPKEITGQDGKWRVPLTVRGKSADIHYTVNVDCKAGTAEY-l
A0A1J7C468_9GAMM/1-88 ...........-MAKVAPCPDLNAAQVADLIDQDYTQNRFQRSEQDPQAAGGRNINAWVNPEDVTGVGDVWQAPLKVRGNEQDLNYAVTLDCTKGEITY-r
A0A4P7J576_9ENTR/27-115 ..........k-TVQFPKCEGLDADGIAASVKRDYQQNRIVRWADDQKKLGQLDPVAWVNPQDIVGKDGQWTVPLTVRGKSADIHYQVKVDCKAGSAEY-l
A0A4Q1BDN2_9GAMM/34-122 ...........RTAKFINCDNLNPQQIDAKVKNDFIQTRLPHWNKDKKLPGGSNVVAWINKNSIIAITHGYRIPLSVRGTKKDVSYQVIVNCQDETITYQ.
A0A6B2FSV9_9ENTR/25-113 ...........RQVAFTGCEGLDAQGIAASVKRDYLQNRVVNWPEDQKQLGQSTPVAWINVSQVKGGQDQWQVPLVVRGKSGDIHYTVHVDCKAQSADY-r
A0A2D0KBB4_9GAMM/34-122 ..........h-VAKFVSCKNLTKDQIAAQVKQDFLQNRLNHWDKDRKQLGTAKPVAWVNVNDITGDKDALQVPLVVRGTKNDKSYNVTIDCQKETISYS.
B4EYB7_PROMH/41-128 ...........RSAPFASCVNLDKEQLATRVKNDYLLNRLPRWQDDKKALG-PKPVANINANDVIKRDNSYHVILDVRGARTDLRYNVEVNCDENKITY-i
A0A859PQ10_9ENTR/30-118 ...........RTATVAPCSTASKDEIAALVKRDFLQNRIPRWDADKKTLGTSTPVAWVAPDSISGDNAKWTIPLKVRGDHTDKTYQITLNCQLGEISYS.
A0A085U679_YERRU/30-118 ...........RMAKLPACVGLNSAQVAAQVKRDFLQNRIVRWDNDKKILGTDAPVVWVSPDDIMGKDDIWEVPLTVRGTKASKNYDVMLNCVEGTISYS.
A0A0N0Z8H4_9GAMM/33-120 ...........RTAHFISCEKLNEVQIGAQVKNDFMHNRLPRWQDEKAILG-SKAVAWVNNNNITQTPEGYQVPLDVRGAKKDLRYNVQVDCVKNTITYQ.
A0A097R2Q5_HAFAL/28-116 ...........RVVTIANCEQTTATQLSTMVKNDFLQNRIPRWADDKALLGTSTPVVWVNQDQVTQKGSDWVLKLTVRGTKVDKNYTVNVDCKAGKLEYS.
A0A090V0H4_PSEVU/25-113 ...........KSVKFPSCEGLDAAGIAASVKRDYQQNRIARWADDQERLGQADPVAWINVKEITGKEDKWTVPLTVRGKNTDIHYQVAVDCKGGKAVY-t
A0A240C625_SERFI/28-116 ...........RTAKVAQCAGLQPAEVAAQVKRDFLQNRITRWEADKKLLGTATPIAWVSPDAISGKDQVWQVPLRVRGTRLDTTYHVTLNCNSGEITY-g
D2TVU7_9GAMM/34-121 ...........RTAKFISCDNLSQQQISAKVKNDFIQTRLPYWDEDRKLLG-PKVVVWINNNSITPIKNGYKILLTVRGARKDLNYQVIVNCQNETVSYQ.
A0A078L8K9_CITKO/28-116 ...........KSVKFPTCEGLNADGIAASVKRDYQQNRIVRWADDQKKVGQANPVVWVNTQDITGKEGNWTVPLTVRGKSADLHYLVKVDCKAGTAEYQ.
A0A250B6S9_9GAMM/30-118 ...........RTAKIGQCVGLKATDASAQVKRDFLQNRITRWESDKRLLGTATPVAWVSQDAITGKGDVWQVPLTVRGTKLDKTYQVTLDCQTGDIRYS.
A0A1X0WJ43_9GAMM/25-112 ......rtspe------ACATITPQNAMDTVTRDFMQNKLPNWGNDKDNLGTQIPSLSFIADNVKQSNGTYDVPFTARGPSGTLKYDAHLNCSNNYIKY-d
YEBF_PHOLL/33-121 ...........RVDKFISCDNLTKSQIAAQVKRDFLQNRINHWSEDRKQLGTSKPVVWVKAENITGDKEILKIPLTVRGSKRDKDYRVVVDCQQNTISYS.
YEBF_YERPE/27-115 ...........RVVKVPACIGLNQSQVATQVKRDFLQNRIPRWEADKKQLGTDKPVVWINVVDIIGKDDIWQVPLIARGNKGDKTYQVVLDCKSGTMTY-t
A0A3S4EK92_SALBN/27-115 ...........KSVKFPTCEGLDADGIAASVKRDYQQNRIVRWADDQKKVGQADPVAWVNVKEVAGQNDKWTVPLTVRGKSADIHYQVIVDCKAGTAEYQ.
L0MAQ4_ENTBF/31-116 ......sesat------ECRRSLTRQAKNLVQEDYLKSRFPYWQIEKKMLGTLTPN--LSFGKVTIEDDAYHVPFTAVGPDATLVRVGIIDCKLQDIDY-a
A0A4Z0KC93_SALET/27-115 ...........KSVKFPQCEGLDAAGIAASVKRDYQQNRIVRWADDQKKVGQADPVAWVNVQDVVGQNDKWTVPLTVRGKSADIHYQVIVDCKAGKAEYK.
YEBF_SALTY/27-115 ...........KSVKFPQCEGLDAAGIAASVKRDYQQNRIVRWADDQKKVGQADPVAWVNVQDVVGQNDKWTVPLTVRGKSADIHYQVIVDCKAGKAEYK.
A0A0L0APS1_9ENTR/29-117 ...........KTVKFPNCEKLDASGIAASVKRDYQQNRIVRWADDRQKIGQADPVVWVDSKEVTGAEGQWKVPLTVRGKSADLHYLVQVDCAGGTASYQ.
A0A085GAS2_9GAMM/30-118 ...........RTVTIAPCNNASKDEVAALVKRDFLQNRITRWDEDKKLLGTSTPVVWISTDSITGDSANWSIPVKARGNRAEKTYPVTLNCQLGQITY-g
D3VDR9_XENNA/32-120 ...........RVAKFISCKNLTKDQVAAQVKQDFLQNRITHWDTDKKQLGTSKPIAWVNVNDMTGDQNALQVPLIVRGSKKDKSYNVTIDCQKETISYS.
W0HW55_9GAMM/193-281 ..........e-IAKVAPCPDLNAAQVAELIDQDYTENRFQRSEQDQQAAGGRNINAWVNPEDVTGVGDVWQAPLKVRGNEQDLNYAVTLDCTKGEITY-r
E3G3M6_ENTLS/19-107 ...........KTVTFPKCEGMSADGIAASVKRDYTQNRVVKWADDQQKLGQVDPVAWVNSNDISGSAGKWRVPMTVRGKSADLHYVVTVDCAAGTAVYS.
D3V1Z0_XENBS/33-121 ..........h-MAKFVSCKNLTKDQIAAQVKQDFLQNRIHHWDKDRKQLGTSKPIAWVNVNDMTGDRNALQVPLIVRGSQRDKSYNVTIDCQKDTINYS.
YEBF_ECO57/28-116 ...........KSVTFPKCEGLDAAGIAASVKRDYQQNRVARWADDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQ.
A0A248KKL9_9ENTR/30-109 cridfsrkall------------------RVKDDYLRGRFPHWYREKRTLGTLTPE--LTFGEVSIEEDEYRVPFVAKGPSARLARIGFVDCETMDVEY-i
C0ARE0_9GAMM/39-126 ...........RSVPFSSCVNLDNNQLVTRVKNDYLQNRLPRWQDDKKALG-PKPVASINANEIIKMNNNYQMVLNVRGARTDLRYNVQVNCDDNTITY-v
A0A845SGV0_9GAMM/155-242 ..........k-IYKVSACPDQNAPQVAELIKQDYTQNRFPHTDDDKKALG-DTIVAQVNPEDITGSGDNWQAPLKIRGQTADRAYLVDLDCEKGEISYS.
A0A859PQ39_9ENTR/33-120 ......rsteg------ACAQISKSNAIDTVTRDYMENRIPNWGNDKDNMGTSVPVLSFISDDAKEDKGTYHIPFSAKGPNGTLGYVAHFNCSNHYVKYS.
A0A3B0IRR8_9GAMM/31-105 ...........RTAKFINCDNLNPQQIGAKMKNDFLQTRLPYWNKDKKLLGGSNVVAWINNNSITAIKHGYRIPLSVRGTKKDLSY--------------.
YEBF_ECOLI/28-116 ...........KSVTFPKCEDLDAAGIAASVKRDYQQNRVARWADDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQ.
A0A370R524_9GAMM/27-115 ...........RTAKIASCESAKPAQMVSMIKNDFLQNRLPRWADDKKLLGTSTPVVWVQDDQIVQNGDSWQIPLKVRGTKVDRTYTVKVDCKAGDLEYS.
A0A4R1N708_9GAMM/189-276 ........qtf---AVAPCPDLNATQVAELIQQDYTQNRFPRFADDKQALG-DTMVAWINPEEVTGTGDSWQAPLKIRGQTADRSYGVTLDCQKGVISY-i
YEBF_SHIFL/28-116 ...........KSVTFPKCEGLDAAGIAASVKRDYQQNRVARWADDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVCVDCKAGMAEYQ.
K8W8T1_9GAMM/31-118 ..........k-AAPFVSCKNLTEPQVAAQVKNDFMHNRLPRWTEEKDLVG-KKAVAWINNQDVVKTETTYKIPLIVRGSKVDLHYHVVVDCENNTITY-n
J7SK57_MORMO/37-124 ...........RMVTFPACESLNKDQIAAQVKYDFVQSRYPRWQDDKALLG-SKPVAWVNVAEVTEKDGNYSVPLVVRGSKKQVSYTVDINCAAKTMTYS.
A0A071LSK4_9ENTR/28-116 .........kr--VSLIPCENMKAENIAATVKNDYLQNRLQRWSDDQKALGQNDPVAWVNVKDMHHNGDTWVVPLVVRGQKQDLHYQVTVDCKAGNADYQ.
T0P0Y0_PHOTE/33-121 ...........RVDKFVSCDNLTKSQIAAQVKRDFLQNRINRWSEDKKQLGTSTPVAWVNEENITGDKAILNIPLTVRGSKRDKDYRVVVDCQQNTISYS.
A8AFJ9_CITK8/50-138 ...........KSVKFPTCEGLNADGIAASVKRDYQQNRIVRWADDQKKVGQANPVVWVNTQDITGKEGNWMVPLTVRGKSADLHYLVKVDCKAGTAEYQ.
A0A1B7K464_9GAMM/31-118 ..........k-AAPFVSCGNLTEPQIAAQVKSDFIHNRLPRWADEKALLG-KKAVAWVNDKEVTKADAIYTVPLVVRGAKTDLQYRVAVDCENNTITY-n
A0A085GDV7_9GAMM/36-124 ......qrttp-----EACKDITPQNAIDTVTRDFMQNRIPNWGNDKDYIGTAVPVLSFVSDNVKDEKGTYRVPFTAKGASGELKYVGHFNCTNHYIKY-e
W1J961_9GAMM/32-120 ..........h-VAKFVSCKNLTKDQIAAQVKQDFLQNRLNHWGKDRQQLGTGKPVAWVNVNDITGDEDVLQIPLIVRGSKKDKSYNATIDCQKETISY-r
YEBF_SHIDS/28-116 ...........KSVTFPKCEGLDAAGIAASVKRDYQQNRVARWADDQKIVGQADLVAWVSLQDIQGKDDKWSVLLTVSGKSADIHYQVSVDCKAGMAEYQ.
#=GC seq_cons ...........+sspFssCcsLsssplAApVKpDahQNRlsRWs-D+KtLGpusPVAWVNsp-lsGpsspWpVPLsVRGppsDlpYpVplDCpssshpYp.
//
