#=GF ID   ocr
#=GF AC   PF08684.14
#=GF DE   DNA mimic ocr
#=GF AU   Mistry J;0000-0003-2479-5322
#=GF SE   pdb_1s7z
#=GF GA   25.00 25.00;
#=GF TC   70.00 69.60;
#=GF NC   24.60 23.60;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -Z 75585367 -E 1000 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   11804597
#=GF RT   Structure of Ocr from bacteriophage T7, a protein that mimics
#=GF RT   B-form DNA. 
#=GF RA   Walkinshaw MD, Taylor P, Sturrock SS, Atanasiu C, Berge T,
#=GF RA   Henderson RM, Edwardson JM, Dryden DT; 
#=GF RL   Mol Cell. 2002;9:187-194.
#=GF DR   INTERPRO; IPR014798;
#=GF DR   SCOP; 1s7z; fa;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   The structure of an ocr protein from bacteriophage T7 has shown
#=GF CC   that this protein mimics the size and shape of a bent DNA
#=GF CC   molecule [1]. ocr has also been shown to be an inhibitor of the
#=GF CC   complex type I DNA restriction enzymes [1].
#=GF SQ   40
#=GS A0A5J6TAV5_9CAUD/4-99   AC A0A5J6TAV5.1
#=GS A0A7D5KDS1_9CAUD/4-101  AC A0A7D5KDS1.1
#=GS A0A1I9SEA4_9CAUD/3-102  AC A0A1I9SEA4.1
#=GS A0A482MRD7_9CAUD/3-103  AC A0A482MRD7.1
#=GS L0HNM8_9CAUD/3-103      AC L0HNM8.1
#=GS A0A7G7YB41_9CAUD/3-101  AC A0A7G7YB41.1
#=GS A0A0D3QHD9_9CAUD/3-103  AC A0A0D3QHD9.1
#=GS K4PB04_9CAUD/4-100      AC K4PB04.1
#=GS A0A7S6R7L9_9CAUD/3-103  AC A0A7S6R7L9.1
#=GS A0A5J6T7K5_9CAUD/3-103  AC A0A5J6T7K5.1
#=GS A0A385IPQ7_9CAUD/3-103  AC A0A385IPQ7.1
#=GS A0A6M5C8J3_9CAUD/3-103  AC A0A6M5C8J3.1
#=GS A0A4P6D9B1_9CAUD/3-103  AC A0A4P6D9B1.1
#=GS A0A7G9UTH2_9CAUD/3-102  AC A0A7G9UTH2.1
#=GS A0A172JGC5_9CAUD/4-103  AC A0A172JGC5.1
#=GS A0A219YH85_9CAUD/3-108  AC A0A219YH85.1
#=GS A0A6B9RJQ1_9CAUD/3-103  AC A0A6B9RJQ1.1
#=GS A0A0P0LM06_9CAUD/3-103  AC A0A0P0LM06.1
#=GS Q2WC28_BPK1E/3-102      AC Q2WC28.1
#=GS A0A4D6DRR5_9CAUD/3-103  AC A0A4D6DRR5.1
#=GS W6PUN0_9CAUD/4-101      AC W6PUN0.1
#=GS A0A2D0VKP0_9CAUD/1-100  AC A0A2D0VKP0.1
#=GS A0A3G8F3M6_9CAUD/3-102  AC A0A3G8F3M6.1
#=GS A0A2P1CKW4_9CAUD/3-100  AC A0A2P1CKW4.1
#=GS K4FBP3_9CAUD/3-103      AC K4FBP3.1
#=GS Q7Y5R4_BPSP6/3-103      AC Q7Y5R4.1
#=GS A0A2H4N0D1_9CAUD/3-102  AC A0A2H4N0D1.1
#=GS A0A192YA23_9CAUD/3-103  AC A0A192YA23.1
#=GS A0A088F8Z9_9CAUD/3-103  AC A0A088F8Z9.1
#=GS A0A192Y9X1_9CAUD/1-101  AC A0A192Y9X1.1
#=GS Q6UGG5_9CAUD/3-102      AC Q6UGG5.1
#=GS A0A7G8L174_9CAUD/4-102  AC A0A7G8L174.1
#=GS I6QAF6_9CAUD/1-64       AC I6QAF6.1
#=GS A0A1J0MF91_9CAUD/3-101  AC A0A1J0MF91.1
#=GS A0A7H0XCA1_9CAUD/3-102  AC A0A7H0XCA1.1
#=GS Q3YK01_BPK1F/4-102      AC Q3YK01.1
#=GS B4YQI0_9CAUD/1-101      AC B4YQI0.1
#=GS OCR_BPT7/3-103          AC P03775.1
#=GS A0A6G6AH61_9CAUD/3-102  AC A0A6G6AH61.1
#=GS A0A2K9VAU5_9CAUD/4-102  AC A0A2K9VAU5.1
A0A5J6TAV5_9CAUD/4-99              nana-----YYELLAATVEAFIERIQYDHLTQD..DDYSDALHEVVGGQVRTIT-TRFS-RAADGIDHEFEDSGLMPETKDVTRILQARIYEALYNDVS--------nsldvv....
A0A7D5KDS1_9CAUD/4-101             nana-----YYELLAATVEAFIERIQYDHLTQD..DDYSDALHEVVGDQVPHYYHEIFTVMAADGIDHEFEDSGLMPETKDVTRILQARIYEALYNDVS--------nsldvv....
A0A1I9SEA4_9CAUD/3-102             rnan----AYYELLAATVEAFNERIQYDKIAEG..DDYSDALHEVVDGNVPHYYHEIFTVMAADGIDHEFEDSGLMPETKDVTHILQARIYEALYIDVSNS------sdvvw.....
A0A482MRD7_9CAUD/3-103             ....MSNMTYSQVYNTAHAALVERIWNDDIDCI..DNAHDAIHEVADSAVPIYYADIFSVMASEGIDHFFEDSGLMPDTKDVTVVLQARIYEQLTIDLWERVQDMI-v.........
L0HNM8_9CAUD/3-103                 ....MSNMTYKNVFDHAYEMLKENIRYDDIRDT..DDLHDAIHMAADSAIPHYYSDIFSVMASEGIDLEFEDSGLMPDTKDVIRILQARIYEQLTIDLWEDAEDLLN..........
A0A7G7YB41_9CAUD/3-101             rnan----AYYDLLAATVKAFNERIQYDQLTQD..DDYYDALHEVVDGMVPHYYHEIFTVMAADGIDHEFEDSGLMPETKDVTRILQARIYEALYNDVSN-------ssdvv.....
A0A0D3QHD9_9CAUD/3-103             ....MSNMTYNNVFDHAYEMLKENIRYDDIRDT..DDLHDAVYMAAEIAVPHYYSDVFSVMASEGIDLEFEDSGLMPDTKDVIRILQARIYEQLTIDLWEDAEDLLN..........
K4PB04_9CAUD/4-100                 .nan----AYYELLAATVEAFNERIQEDQLTEH..HDYHDALHEVVDRMVPHYYWEIFTVMAADGIDVEFDDAGLMPDTKDVTRILQARIYEALYNDVPSD------sgi.......
A0A7S6R7L9_9CAUD/3-103             ....MSNMTYNNVFDHAYEMLKENIRYDDIRDT..DDLHDAIHMAADNAVPHYYADIFSVMASEGIDLEFEDSGLMPDTKDVIRILQARIYEQLTIDLWEDAEDLLN..........
A0A5J6T7K5_9CAUD/3-103             ....MSNMTYNNVFDHAYEMLKENIRYDDIRDT..DDLHDAVHMAADSAVPHYYADIFSVMASEGIDLEFEDSGLMPDTKDVIRILQARIYEQLTIDLWEDAEDLLN..........
A0A385IPQ7_9CAUD/3-103             ....MSNMTYSQVYNTAHAALVERIWNDDIDCI..DNAHDAIHEVADSAVPIYYADIFSVMASEGIDHFFEDSGLMPDTKDVTVVLQARIYEQLTIDLWERVQ----ymii......
A0A6M5C8J3_9CAUD/3-103             ....MSNMTYNNVFDHACEMLKENIRYDDIRDT..DDLHDAVHMAADNAVPHYYSDVFSVMASEGIDLEFEDSGLMPDTKDVIRILQARIYEQLTIDLWEDAEDLLN..........
A0A4P6D9B1_9CAUD/3-103             rnan----AYYELQAQALELLKERIQYDDICDS..SDASDAIHEIADDVTPHYYHEIFTVMAADGIDTDFEDSGLIPDTKDVSQICQARIYEQLTIDMYAEIDSLV-e.........
A0A7G9UTH2_9CAUD/3-102             rnan----AYYDLLAATVELFNERIQQDELTED..ADWSDALHEVVDGQVPHYYSEIFTVMAADGIDHEFDDSGLIPDTKDVSRICQARIYEALYNDVSNDS-----giiw......
A0A172JGC5_9CAUD/4-103             nana-----YYELLAATVKAFNERIQYDGIQED..DDYSDALHEVVDSQVPHYYHEIFTVMAADGIDHEFEDSGLMPDTKDVTRILQARIYEALYNDVSN-------ssdvvwf...
A0A219YH85_9CAUD/3-108             rnan----AYYDLLAATVELFNARIQQDELSMF..SDWSDALHEVVDGQVPHYYHEIFTVMAADGIDLEFDDSGLIPDTKDVSRICQARIYEALYNDVSNDS-----givwwedeed
A0A6B9RJQ1_9CAUD/3-103             ....MSNMTYNNVFDHAYEMLKENIRYDDIRDT..DDLHDAVHMAADNAVPHYYSDVFSVMASEGIDLEFEDSGLMPDTKDVIRSLQARIYEQLTIDLWEDAEDLLN..........
A0A0P0LM06_9CAUD/3-103             ....MSNMTYSNVFDHAYEMLNENIRYDDIRDT..DGLGDAIHEAADSAVPHYYSDIFSVMASEGIDLEFEDSGLMPDTKDVTSILQARIYEQLTIDLWEKAEDLLN..........
Q2WC28_BPK1E/3-102                 rnan----AYYNLLAATVEAFNERIQYDEIREG..DDYSDALHEVVDSNVPVYYSEIFTVMAADGIDIEFEDAGLIPDTKDVTKILQARIYESLYNDVPNDSD----vvw.......
A0A4D6DRR5_9CAUD/3-103             ....MSNMTYNNVFDHAYEMLKENIRYDDIRDT..DDLHDAVHMAADNAVPHYYSDVFSVMASEGIDLEFEDSGLMPDTKDVIRILQARIYEQLTIDLWEDAEDLLN..........
W6PUN0_9CAUD/4-101                 nada-----YYKLVADAVKAFNERIQYDQIAEG..DEYHDALHEVVDDYVPHYYSEIFTVMAADGIDHEFEDSGLMPESMDVTVILQARIYEALYNDVQNDC-----glv.......
A0A2D0VKP0_9CAUD/1-100             ..mt----TYNEVLDSAIESLKEYIECNDIQEE.tYEIQDAISEIADNAIPIYNCDIFSVFAEGGISYQMDDTGLIEGCDDVIQILQMRIYEELSNDLYHMVRGLIN..........
A0A3G8F3M6_9CAUD/3-102             rnan----AYYDLVAATVKLFNERIQYDELTEN..DDWSDALHEVVDGQVPHYYSEIFTVMAADGICHEFDDSGLIPDTKDVSRICQARIYEALYNDVLNDS-----givw......
A0A2P1CKW4_9CAUD/3-100             rnan----AYYELLAAAVEAFNVRIQEDQLTEH..HDYHAALHEVVDKMVPHCYWEIFMVMAADGIDVEFDDAGQMPDTKDVTRILQARIYEALYNDVPSD------sgi.......
K4FBP3_9CAUD/3-103                 ....MSNMTYSQVYNTAHAALVERIWDDAIDCI..DNAHDAIHEVADSTVPIYYADIFSVMASEGIDHFFEDSGLMPDTKDVTVVLQARIYEQLTIDLRERVQDMI-d.........
Q7Y5R4_BPSP6/3-103                 ....MSNMTYSDVYNHAYGLLKEYIRYDDVRNE..DDLSDKIHEAAGNAVPHWYADIFSVMASDGIDLEFDDSGLMPDTKDVTYILQARIHEQLTIDLYGDAEDLLN..........
A0A2H4N0D1_9CAUD/3-102             rnan----AYYNLLAATVEAFNERIQFDEIREG..DDYSDALHEVVDSNVPVYYSEIFTVMAADGIDVDFEDAGLIPDTKDVTKILQARIYEALYNDVPNDSD----vvw.......
A0A192YA23_9CAUD/3-103             ....MSNMTYNNVFDHAYEMLKENIRYDDIRDT..DDLYDAVHMAADSAVPHYYADIFSVMASEGIDLEFEDSGLMPDTKDVIRILQARIYEQLTIDLWEDAEDLLN..........
A0A088F8Z9_9CAUD/3-103             ....MSNMTYNNVFDHAYEMLKENTRYDDIRDT..DDLHDAVHMAADSAVPHYYSDVFSVMASEGIDLEFEDSGLMPDTKDVIRILQARIYEQLTIDLWEDTEDLLN..........
A0A192Y9X1_9CAUD/1-101             ..mt----TYNELLDTARDELKDAIRELHVTDErdDDIRDRIYEIIEGAMPYANHEIFEVFAGNGISYQMDDNGLIEGCTDVIEILKMRIYEELSNDLYGELSDLI-q.........
Q6UGG5_9CAUD/3-102                 rnan----AYYNLLAATVEAFNERIQFDEIREG..DDYSDALHEVVDSNVPVYYSEIFTVMAADGIDVDFEDAGLIPDTKDVTKILQARIYEALYNDVPNDSD----vvw.......
A0A7G8L174_9CAUD/4-102             .nan----AYYELLAATVELFNERIQCDEIAEG..DDYSDALHEVVDGNVPHYYHEIYTVMAADGIDNEFEDSGLMPETKDVTRILQARIYEALYNDVSNSSE----vvw.......
I6QAF6_9CAUD/1-64                  ....-----------------------------..--------MAADSAIPHYYSDIFSVMASEGIDLEFEDSGLMPDTKDVIRILQARIYEQLTIDLWEDAEDLLN..........
A0A1J0MF91_9CAUD/3-101             ..rn--NNAYYDLVAATVEAFNERIQADKLTQD..DDGYDALHEVVDNNVPHYYHEIFTVMAADGIDHAFEDSGLMPDTNDVTVILQARIYEALWNDVLNDC-----glv.......
A0A7H0XCA1_9CAUD/3-102             rnan----AYYNLLAATVEAFNERIKYDEIRED..DDYSDALHEVVDSHVPVYYSEIFTVMAADGIDVEFEDAGLIPDTKDVTMILQARIYEALYNDVPNDSD----vvw.......
Q3YK01_BPK1F/4-102                 .nan----AYYELLAATVELFNERIQYDEITEG..DDYSDALHEVVDGQVPHYYHEIFTVMAADGIDHEFEDSGLMPETKDVTRILQARIYEALYNDVSNSSE----vvw.......
B4YQI0_9CAUD/1-101                 ..mt----TFNELYASAKEDLEAAIRELHVTDTddDDIRDRIHEIADSNVPIYNGDVFAVFADGGISYEMDDSGLIEGVTDVLHILRVRIYEELINCLYGDLEDC--vt........
OCR_BPT7/3-103                     ....MSNMTYNNVFDHAYEMLKENIRYDDIRDT..DDLHDAIHMAADNAVPHYYADIFSVMASEGIDLEFEDSGLMPDTKDVIRILQARIYEQLTIDLWEDAEDLLN..........
A0A6G6AH61_9CAUD/3-102             rnan----AYYDLLAATVGLFNERIQYDEIAEG..DDYSDALHEVVDGQVPHYYHEIFTVMAADGISHEFNDSGLMPETKDVTRILQARIYEALYNDVSN-------ssdvvw....
A0A2K9VAU5_9CAUD/4-102             dana-----YYELLAATVEAFNERIQYDGIRED..DDYSDALHEVVAGNVPHYYHEIFTVMAADGIDIEFDDAGLIPDTKDVTKILQARIYEALYNDVLNDS-----gvvw......
#=GC seq_cons                      ...s....sY.plhssshEhhpERIpYD-Ip-s..DDhpDAlHElsDusVPHYYu-IFoVMAu-GIDhEFEDSGLMPDTKDVo+ILQARIYEtLh.Dl.pDsp..............
//