#=GF ID   rpo132
#=GF AC   PF12415.12
#=GF DE   Poxvirus DNA dependent RNA polymerase
#=GF AU   Gavin OL;
#=GF SE   Prosite
#=GF GA   25.00 25.00;
#=GF TC   25.00 27.90;
#=GF NC   20.70 19.30;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 --cpu 4 -E 1000 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   1824607
#=GF RT   Identification, sequence, and expression of the gene encoding
#=GF RT   the second-largest subunit of the vaccinia virus DNA-dependent
#=GF RT   RNA polymerase.
#=GF RA   Amegadzie BY, Holmes MH, Cole NB, Jones EV, Earl PL, Moss B;
#=GF RL   Virology. 1991;180:88-98.
#=GF DR   INTERPRO; IPR024390;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This domain family is found in viruses, and is approximately 30
#=GF CC   amino acids in length. The family is found in association with
#=GF CC   Pfam:PF04566, Pfam:PF00562, Pfam:PF04567, Pfam:PF04560,
#=GF CC   Pfam:PF04565. This family is the second largest subunit of the
#=GF CC   poxvirus DNA dependent RNA polymerase. It has structural
#=GF CC   similarity to the second-largest RNA polymerase subunits of
#=GF CC   eubacteria, archaebacteria, and eukaryotes.
#=GF SQ   40
#=GS A0A3F2YKT1_SHEVT/238-269  AC A0A3F2YKT1.1
#=GS H6TAA3_9POXV/238-269      AC H6TAA3.1
#=GS A0A1B3B6C5_LSDV/238-269   AC A0A1B3B6C5.1
#=GS G3EI20_9POXV/246-277      AC G3EI20.1
#=GS R4JUP3_9POXV/246-277      AC R4JUP3.1
#=GS Q08FM7_DPV83/238-269      AC Q08FM7.1
#=GS D3IZP9_9POXV/238-267      AC D3IZP9.1
#=GS RP132_VACCW/246-277       AC Q76ZP7.1
#=GS A0A223FMW8_9POXV/246-277  AC A0A223FMW8.1
#=GS Q9Q8I6_MYXVL/238-269      AC Q9Q8I6.1
#=GS A0A223FNI4_9POXV/246-277  AC A0A223FNI4.1
#=GS Q1HTS4_9POXV/238-265      AC Q1HTS4.1
#=GS A0A6B9R3C5_9POXV/238-269  AC A0A6B9R3C5.1
#=GS Q6TVL9_ORFSA/238-268      AC Q6TVL9.1
#=GS A0A2U9QHS8_9POXV/238-269  AC A0A2U9QHS8.1
#=GS Q2QJI8_9POXV/246-277      AC Q2QJI8.1
#=GS RP132_CAMPS/246-277       AC Q775Q3.1
#=GS RP132_VACCT/246-277       AC Q9JF79.1
#=GS Q9Q8W4_RFVKA/238-269      AC Q9Q8W4.1
#=GS A0A1V0S849_CNPV/238-269   AC A0A1V0S849.1
#=GS F1AXD1_ORFV/238-268       AC F1AXD1.1
#=GS Q6VZ84_CNPV/238-269       AC Q6VZ84.1
#=GS A0A7H0DNC3_MONPV/246-277  AC A0A7H0DNC3.1
#=GS Q08F57_DPV84/238-269      AC Q08F57.1
#=GS RP132_VAR67/246-277       AC P0DST3.1
#=GS A0A1L3IZN8_9POXV/238-269  AC A0A1L3IZN8.1
#=GS Q0GNU0_HSPV/246-277       AC Q0GNU0.1
#=GS Q98839_MCV1/246-277       AC Q98839.1
#=GS A0A097IVX2_9POXV/238-269  AC A0A097IVX2.1
#=GS Q070A4_CPRVZ/238-269      AC Q070A4.1
#=GS Q6TUQ3_YMTV5/246-277      AC Q6TUQ3.1
#=GS Q9DHJ7_YLDV/246-277       AC Q9DHJ7.1
#=GS Q8V3I3_SWPV1/246-277      AC Q8V3I3.1
#=GS A0A2C9DT93_9POXV/238-269  AC A0A2C9DT93.1
#=GS A0A0M5HS79_9POXV/238-269  AC A0A0M5HS79.1
#=GS RP132_FOWPN/238-269       AC Q9J544.1
#=GS RP132_VACCC/246-277       AC P68694.1
#=GS A0A1B1MRL7_9POXV/246-277  AC A0A1B1MRL7.1
#=GS E2CZK3_9POXV/238-269      AC E2CZK3.1
#=GS Q70GX0_FOWPV/238-269      AC Q70GX0.1
A0A3F2YKT1_SHEVT/238-269             s-FIKHSLSYDMPSEISYLVNTIIESTKELIK-t..
H6TAA3_9POXV/238-269                 .DFLENNLCYDMPIEVIYLAKSIIESTKTFIS-n..
A0A1B3B6C5_LSDV/238-269              s-FIKHSLSYDMPSEISYLVNTIIESTKELIK-t..
G3EI20_9POXV/246-277                 .EFIRHSLSYDMPQEAIYLVNTVIDSAMGIIKS...
R4JUP3_9POXV/246-277                 .DFIQNSLSFDMPQEIIYLINALIESVKIITD-n..
Q08FM7_DPV83/238-269                 .DFIRRSLSFDMPQEIIYLVNAIIENTKEFIT-k..
D3IZP9_9POXV/238-267                 .EFVARNLCFDMPPEAVHLATALVESAKT----vp.
RP132_VACCW/246-277                  .EFIRRSLSYDMPPEVVYLVNAIIDSAKRITES...
A0A223FMW8_9POXV/246-277             .EFIRNSLSYDMPQEAIYLVNAVIDSAIGIVKS...
Q9Q8I6_MYXVL/238-269                 .NFIKQSLSYDMPDEIIYLVNAVIESTKHFVDS...
A0A223FNI4_9POXV/246-277             .EFIRNSLSYDMPQEAIYLVNAVIDSAIGIVKS...
Q1HTS4_9POXV/238-265                 .DFIRNSLTYDMPAEAAYLVNAIVDSA------pa.
A0A6B9R3C5_9POXV/238-269             .DFIRRSLSYDMPVEVTYLINVLIESAISIIQ-g..
Q6TVL9_ORFSA/238-268                 .EFVARNLCFDMPPEAAHLATALVESAKT----vpa
A0A2U9QHS8_9POXV/238-269             .DFILNNLMFDMPTETTYLSRALVESTKIITNS...
Q2QJI8_9POXV/246-277                 .EFIRRSLSYDMPTEVVYLVNAIIDSAKRLTES...
RP132_CAMPS/246-277                  .EFIRRSLSYDMPPEVVYLVNAIIDSAKRLTES...
RP132_VACCT/246-277                  .EFIRRSLSYDMPPEVVYLVNAIIDSAKRITES...
Q9Q8W4_RFVKA/238-269                 .DFIKQSLSYDMPDEIIYLVNTVIESTKHFVNS...
A0A1V0S849_CNPV/238-269              .DFIKNNLSYDMPKETIYLINSIIESTKTITD-v..
F1AXD1_ORFV/238-268                  .EFVARNLCFDMPPEAAHLATALVESAKT----vpa
Q6VZ84_CNPV/238-269                  .DFIKNNLSYDMPKETIYLIEAIIESTKTILD-t..
A0A7H0DNC3_MONPV/246-277             .EFIRRSLSYDMPPEVVYLVNAIIDSAKRLTES...
Q08F57_DPV84/238-269                 .DFIKRSLSFDMPQEVIYLVNAIIENTKEFIN-k..
RP132_VAR67/246-277                  g-FIRRSLSYDMPPEVVYLVNAIIDSAKRLTES...
A0A1L3IZN8_9POXV/238-269             .DFLENNLCYDMPTEVIYLAKSIIESTKTFIS-n..
Q0GNU0_HSPV/246-277                  .EFIRRSLSYDMPPEVVYLVNAIIDSAKRITES...
Q98839_MCV1/246-277                  .DFIRNSLAYDMPPEAVYLVNALVESTRRLAA-a..
A0A097IVX2_9POXV/238-269             .DFLENNLCYDMPIEVIYLAKSIIESTKTFIS-n..
Q070A4_CPRVZ/238-269                 .EFVRANLTYDMPTEVSYLVNCLLESTKLITDC...
Q6TUQ3_YMTV5/246-277                 .DFVKGSLSYDMPNEIIYLVNSLIESTKELIK-g..
Q9DHJ7_YLDV/246-277                  .DFIKKSLSYDMPSEIIYLVNSLIESTKELIK-d..
Q8V3I3_SWPV1/246-277                 .DFIKQSLSYDMPEEVIFLVNSIIESTKELIKS...
A0A2C9DT93_9POXV/238-269             .EFIRRSLSYDMPRETTYLINAIVESTRSVAES...
A0A0M5HS79_9POXV/238-269             .NYIKNNLSYDMPIETIYLINAIIESSRIIIE-t..
RP132_FOWPN/238-269                  .NYIKNNLTYGMPLETIYLINAIIESSKTILEA...
RP132_VACCC/246-277                  .EFIRRSLSYDMPPEVVYLVNAIIDSAKRITES...
A0A1B1MRL7_9POXV/246-277             .EFIINNLTFDMPTEAGYLAHSLVESTKYITS-k..
E2CZK3_9POXV/238-269                 .NFIKQSLSYDMPDEIIYLVNAVIESTKHFVDS...
Q70GX0_FOWPV/238-269                 .NYIKNNLTYGMPLETIYLINAIIESSKTILEA...
#=GC seq_cons                        .-FI+pSLSYDMPsEllYLVNAlIESsKplhc....
//