#=GF ID vRNAP_dom
#=GF AC PF21769.1
#=GF DE Virion DNA-directed RNA polymerase domain
#=GF AU Bateman A;0000-0002-6982-4660
#=GF AU Lazaro Pinto Beatriz;0000-0001-6837-2941
#=GF SE ECOD:EF19092
#=GF GA 27.00 27.00;
#=GF TC 27.00 29.80;
#=GF NC 26.30 24.50;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch -Z 75585367 -E 1000 --cpu 4 HMM pfamseq
#=GF TP Domain
#=GF RC Paper describing PDB structure 2po4
#=GF RN [1]
#=GF RM 18362338
#=GF RT X-ray crystal structure of the polymerase domain of the
#=GF RT bacteriophage N4 virion RNA polymerase.
#=GF RA Murakami KS, Davydova EK, Rothman-Denes LB;
#=GF RL Proc Natl Acad Sci U S A. 2008;105:5046-5051.
#=GF RC Paper describing PDB structure 3c2p
#=GF RN [2]
#=GF RM 19061645
#=GF RT Structural basis for DNA-hairpin promoter recognition by the
#=GF RT bacteriophage N4 virion RNA polymerase.
#=GF RA Gleghorn ML, Davydova EK, Rothman-Denes LB, Murakami KS;
#=GF RL Mol Cell. 2008;32:707-717.
#=GF RC Paper describing PDB structure 3q0a
#=GF RN [3]
#=GF RM 21321236
#=GF RT X-ray crystal structures elucidate the nucleotidyl transfer
#=GF RT reaction of transcript initiation using two nucleotides.
#=GF RA Gleghorn ML, Davydova EK, Basu R, Rothman-Denes LB, Murakami KS;
#=GF RL Proc Natl Acad Sci U S A. 2011;108:3566-3571.
#=GF DR SO; 0000417; polypeptide_domain;
#=GF CC This domain is found in Virion DNA-directed RNA polymerase from
#=GF CC Bacteriophage N4 (vRNAP), responsible for the transcription of
#=GF CC the early region of the double-stranded linear DNA genome of the
#=GF CC lytic coliphage. This domain adopts a mostly alpha-helical
#=GF CC configuration [1-3].
#=GF SQ 50
#=GS A0A514CUC2_9CAUD/1840-1985 AC A0A514CUC2.1
#=GS A0A023NFX4_9CAUD/2058-2194 AC A0A023NFX4.1
#=GS A0A2P1CCM7_9CAUD/1900-2044 AC A0A2P1CCM7.2
#=GS A0A2H4P7F0_9CAUD/1879-2024 AC A0A2H4P7F0.1
#=GS RPOLV_BPN4/1914-2058 AC Q859P9.2
#=GS A0A3G1QTM4_9CAUD/1937-2084 AC A0A3G1QTM4.1
#=GS K4MM86_9CAUD/1881-2025 AC K4MM86.1
#=GS G0XNV0_9CAUD/2164-2318 AC G0XNV0.1
#=GS A0A7D5FN68_9CAUD/1874-2018 AC A0A7D5FN68.1
#=GS E9NIH5_9CAUD/1890-2035 AC E9NIH5.1
#=GS A0A8F3HKU2_9CAUD/2016-2170 AC A0A8F3HKU2.1
#=GS V5UQ52_9CAUD/1102-1256 AC V5UQ52.1
#=GS A0A7S5QXH3_9CAUD/1791-1922 AC A0A7S5QXH3.1
#=GS K4Q5A1_9CAUD/2259-2395 AC K4Q5A1.1
#=GS C4NT62_9CAUD/2144-2281 AC C4NT62.1
#=GS A0A5C1K5R8_9CAUD/1903-2046 AC A0A5C1K5R8.1
#=GS A0A2Z4Q0F2_9CAUD/1881-2025 AC A0A2Z4Q0F2.1
#=GS A0A858MS52_9CAUD/1864-2019 AC A0A858MS52.1
#=GS A0A5B9NB61_9CAUD/1973-2117 AC A0A5B9NB61.1
#=GS A0A0A0YU84_9CAUD/1937-2074 AC A0A0A0YU84.1
#=GS A0A514CU46_9CAUD/1853-1998 AC A0A514CU46.1
#=GS A0A345ML51_9CAUD/1967-2109 AC A0A345ML51.1
#=GS A0A385II06_9CAUD/1881-2025 AC A0A385II06.1
#=GS A0A3G3MDF1_BPN4/1914-2058 AC A0A3G3MDF1.1
#=GS A0A858MSI7_9CAUD/1864-2019 AC A0A858MSI7.1
#=GS A0A1L2C924_9CAUD/2013-2125 AC A0A1L2C924.1
#=GS A0A2P1JUW9_9CAUD/1879-2023 AC A0A2P1JUW9.1
#=GS A0A5B8R7F2_9CAUD/2026-2163 AC A0A5B8R7F2.1
#=GS M4PMR4_9CAUD/1833-1968 AC M4PMR4.1
#=GS A0A2Z4QHU9_9CAUD/2040-2178 AC A0A2Z4QHU9.1
#=GS A0A097PAM3_9CAUD/1844-1989 AC A0A097PAM3.1
#=GS S4TNI5_9CAUD/1995-2132 AC S4TNI5.1
#=GS A0A514CUJ9_9CAUD/1879-2024 AC A0A514CUJ9.1
#=GS A0A1L2C9F7_9CAUD/2046-2158 AC A0A1L2C9F7.1
#=GS A0A7S5UU06_9CAUD/1803-1934 AC A0A7S5UU06.1
#=GS W6ASR7_9CAUD/1938-2085 AC W6ASR7.1
#=GS J9SSZ3_9CAUD/2001-2145 AC J9SSZ3.1
#=GS A0A067Y1K7_9CAUD/2002-2146 AC A0A067Y1K7.1
#=GS A0A0L0CE10_LUCCU/2018-2134 AC A0A0L0CE10.1
#=GS A0A5C2H3R5_9CAUD/1859-2003 AC A0A5C2H3R5.1
#=GS A0A0K2FIP3_9CAUD/1840-1985 AC A0A0K2FIP3.1
#=GS A0A7S5RMZ0_9CAUD/1798-1929 AC A0A7S5RMZ0.1
#=GS V9VG30_9CAUD/1833-1978 AC V9VG30.1
#=GS C4NTE0_9CAUD/2297-2434 AC C4NTE0.1
#=GS A0A0A7XDM1_9CAUD/2001-2145 AC A0A0A7XDM1.1
#=GS A0A514CTB6_9CAUD/1840-1985 AC A0A514CTB6.1
#=GS A0A7S5R3R1_9CAUD/1797-1928 AC A0A7S5R3R1.1
#=GS A0A514CVV1_9CAUD/1853-1998 AC A0A514CVV1.1
#=GS A0A898KBE2_9CAUD/1984-2121 AC A0A898KBE2.1
#=GS G0YQH1_9CAUD/1989-2142 AC G0YQH1.1
A0A514CUC2_9CAUD/1840-1985 ..............VAGIPVMTIGTGDGQMMQTLATM..KGKPTGT.LKIFDGMNMKLS.S.IEADAQKANQAVYESWMG.NPLQAVSDSYQKFLKAADF.S.N.MN..........DDLTTGLKRSLLEP....KqWK....EDV....KPE.........VLEAAAIALGERLKQSAMEAEARHR.AL.D.R..VNLSIDQMA.................................................
A0A023NFX4_9CAUD/2058-2194 ..............VKAIPFTVIGTGDAMMMNLIFGS..DGAPMDV.LGVFDGLDVPVT.K.LQQYAPMVNQRVMETWDR.DVLAMAVENFRGFLNN-D-.-.-.LD..........QEALKRAFATAKDK....S.KK....STV....TAT.........SNEELIQQLDIRLQNN----RAFKA.ML.K.K..VPVSVDQMG.................................................
A0A2P1CCM7_9CAUD/1900-2044 ..............VAGIPFMTIGTGDGMMMQTLSTM..KGAPKNT.LKIFDGMNIGLN.D.IEDASRKANEAVYTSWQG.NPIKNVYDSFAKFMKNVDF.N.E.LS..........PEAIDAIKASALEF....T.ER....EKA....TID.........DIQAASAQIERNLRNIALGVDIRHK.VM.D.K..VQTTVDQMA.................................................
A0A2H4P7F0_9CAUD/1879-2024 ..............VAGIPFMTIGTGDGMMMQGLSNM..KGAPTGT.LKIFDGINLPLD.Q.IESGSEMANRAVYESWMG.NPLQAVSDSYQKFLKNADF.K.N.MN..........EELTNSLKRSLLEP....KlWK....EKV....APE.........YLEGAARALGEKLKFSAMSAEARHR.AM.D.R..VNLSVDQMA.................................................
RPOLV_BPN4/1914-2058 ..............VAGIPFMTIGTGDGMMMQTLSTM..KGAPKNT.LKIFDGMNIGLN.D.ITDASRKANEAVYTSWQG.NPIKNVYESYAKFMKNVDF.S.K.LS..........PEALEAIGKSALEY....D.QR....ENA....TVD.........DIANAASLIERNLRNIALGVDIRHK.VL.D.K..VNLSIDQMA.................................................
A0A3G1QTM4_9CAUD/1937-2084 ..............VSGIPFMNIGMGDGQMVQSAYVG..KDAPQKS.TPIFDGVNLALD.R.MNEDSRTMNKAVYTAWQN.NPLRAVLNAYDTLMTQAD-.S.A.YP..........EAAHAALVKAVIDD....A.AAvkdpASV....SKE.........AVKAAMVALQAQLANAADNIDARHD.LM.S.K..VQLAVDQMA.................................................
K4MM86_9CAUD/1881-2025 ..............VAGIPFMTIGTGDGMMMQTLSTM..KGAPKNT.LKIFDGMNIGIN.D.ITDASRKANEAVYTSWQG.NPIKNVYDSFAKFMKNVDF.S.K.LS..........DETKQAIAKSALEY....D.QR....EGA....TDD.........LLRIGAEQIERNLRNIALGVDIRHK.VM.N.Q..VQTTVDQMA.................................................
G0XNV0_9CAUD/2164-2318 ..............VAGIPFMTIGTGDGMMMQTLSTM..KGAPKNT.LKIFDGMNIGIS.D.ITDASRKANEAVYTSWQG.NPIKNVYDSFSKFMKNVDF.D.K.LS..........DKTIDDIARSALDF....E.QL....SHI...sRVEgdrqykidmIKNSGVNLIERNLRNIALGVDIRHK.VM.N.Q..VQTTVDQMA.................................................
A0A7D5FN68_9CAUD/1874-2018 ..............VAGIPFMTIGTGDGMMMQTLSTM..KGAPKNT.LKIFDGMNIGIS.D.ITDASRKANEAVYTSWQG.NPIKNVYDSYAKFMKNVDF.S.K.LS..........DETKQAIAKSALEY....D.QR....EGA....TDD.........LLRAGAEQIERNLRNIALGVDIRHK.VM.N.Q..VQTTVDQMA.................................................
E9NIH5_9CAUD/1890-2035 vrampllvqsmeas----------------MQAVARM..E-NPHTA.LNVFDGYEAPIT.G.MTESSHAINNGVINSWANfDLLSDFFSKFDKGTQ-VDF.N.N.LNl........sDAAIARLEKSYKKV....Q.KN....ENL....TNP.........VDPAFIAEFKKDLQYEAARVKALKD.GL.F.KsgIPSSIDQM-t................................................
A0A8F3HKU2_9CAUD/2016-2170 ..............VAGIPFMTIGTGDGMMMQTLSTM..KGAPKNT.LKIFDGMNIGIN.D.ITDASRKANEAVYTSWQG.NPIKNVYESFSKFVKNVDL.N.K.LS..........DSAIDAIAKSALDF....E.QR....AHI...aRVDgdrdykismIRDSGIALIERNLRNIALGVDIRHK.VM.D.Q..VQVTVDQMA.................................................
V5UQ52_9CAUD/1102-1256 ..............VAGIPFMTIGTGDGMMMQTLSTM..KGAPKNT.LKIFDGMNIGIN.D.ITDASRKANEAVYTSWQG.NPIKNVYESFSKFAKNVDL.N.K.LS..........DSAIDAIAKSALDF....E.QR....THI...aRVDgdrdykismIKDSGIALIERNLRNIALGVDIRHK.VM.D.Q..VQVTVDQMA.................................................
A0A7S5QXH3_9CAUD/1791-1922 ..............VGGVPYMVIGTGDGQMVQNIFAN..T-NIDNV.LAVFDGIELPAS.K.IKEYSELINKSVYEAWQA.NPVADIASAFRAFVRRNP-.-.-.LS..........LPLSNETVEKIGRA....-.--....---....---.........LEGESIDWLAQYLQLDADSITERKA.AL.N.Q..VTLSVDHMA.................................................
K4Q5A1_9CAUD/2259-2395 ..............VKALPFMVIGSGDAMMMNFFFGS..DNAPEDV.LGVFDGLDVPVT.K.IRDYSPQINEAVNKSWKR.DVLGMALQNFESFLERVD-.-.-.-D..........PATFEAAAADVLGN....F.KK....KTV....VAA.........NWKELHEQLKERYKEN----KARKK.II.A.Q..MQKSVDQMG.................................................
C4NT62_9CAUD/2144-2281 ..............VRALPFAVIGTGDAMMMNLIFGA..DNAPNDV.LPVFDGIDVPVS.K.IKQYAPQINEAVLKSWDR.DVLGMAVQNFEGFMSN---.-.K.LD..........SDILNDVWAELMTD....N.KK....ESL...kFFQ.........GPEDLQAEMAKRLKEN----RARKK.VF.R.Q..MAVSVDQMG.................................................
A0A5C1K5R8_9CAUD/1903-2046 ..............VAGIPFMNIGAGDGQMMQNISVA..DNAPTGT.LKIFDGMNMPLD.Q.IESGSEVANQAVYDSWMG.NPLKAVYDSYSQFMENADL.S.K.FP..........AATQQQLSRALFGL....N.NS....EAS....-LD.........EIREAMRDLTNNLNSAQQQIEARHQ.VM.S.Q..VSLSIDQMA.................................................
A0A2Z4Q0F2_9CAUD/1881-2025 ..............VAGIPFMTIGTGDGMMMQTLSTM..KGAPKNT.LKIFDGMNIGIN.D.ITDASRKANEAVYTSWQG.NPIKNVYDSYAKFMKNVDF.S.K.LS..........DETKQAIAKSALEY....D.QR....EGA....TDD.........LLRVGAEQIERNLRNIALGVDIRHK.VM.N.Q..VQTTVDQMA.................................................
A0A858MS52_9CAUD/1864-2019 ..............VKGVPSMVIGTGDGMIMQHMFA-..KGKPFNS.LPVFDGINFSGK.D.MDAGSRKANEGVYEAMLA.NPMRAIADAFNTFLAN-DP.V.S.MLlegdnidevrQFIVDEVSKTVAGK....R.TL....KGEd.ilTAE.........QIRNELISIADTLNELAMETDARNI.VL.R.E..MSLSVDQMA.................................................
A0A5B9NB61_9CAUD/1973-2117 ..............VAGAAFMTIGSGDGMMMQHLANA..--GLEGT.LKVFDGMNIAID.QrMTEYSKRANEAVYQSWQG.NPLKAVADSFNTFQKNLKE.E.M.ID..........DDNLKALYRALGLK....M.AK....GEV...pMVS.........KVMSAIDELAQNMNWAGDSAARRIE.AR.Q.S..IANSVDQMA.................................................
A0A0A0YU84_9CAUD/1937-2074 ...........eaa----------------MQAIAR-..DINPNNA.LNVFDGYINAVA.H.LDTGSQAINQGVLQSWNEfDLLQDFTNRFEQAMEGVNL.TeE.LGp.......daDTRLEQSFRGIMEM....I.GA....DET....NSP.........TSPEVLEAFTTLLKKEAATQTAIKQgLLgG.E..AVTSINQM-t................................................
A0A514CU46_9CAUD/1853-1998 ..............VAGIPFLTIGMGDGMMMQELAAM..KNGPTGT.LKIFDGMNMKLS.T.ITEDSVKANEAVYKSWQG.NPAQAVSDSFQKFMKNADF.S.N.MS..........DDLQAALRRSLLEP....KyWN....EKV....KPE.........VLEAAALALGNRLANTALEVKARHN.VM.N.R..VQVTVDQMG.................................................
A0A345ML51_9CAUD/1967-2109 ..............VAGIPFMTIGMGDGMMMQDLARR..--GLKGT.LKIFDGMNIPID.K.IMDYSRQANEAVYNSWKG.NPLAQVQKSYDRFMSNVDT.A.E.IP..........DSMVPALARALFPA....A.MA....EQI....DTD.........DIRTAMTELVEKLAYSAKSIDARHA.AM.D.S..LALSVDQMA.................................................
A0A385II06_9CAUD/1881-2025 ..............VAGIPFMTIGTGDGMMMQTLSTM..KGAPKNT.LKIFDGMNIGIN.N.ITDASRKANEAVYTSWQG.NPIKNVYDSFSKFMKNVDF.S.K.LS..........DETKQAIAKSALEY....D.QR....EGA....TDD.........LLRVGAEQIERNLRNIALGVDIRHK.VM.N.Q..VQTTVDQMA.................................................
A0A3G3MDF1_BPN4/1914-2058 ..............VAGIPFMTIGTGDGMMMQTLSTM..KGAPKNT.LKIFDGMNIGLN.D.ITDASRKANEAVYTSWQG.NPIKNVYESYAKFMKNVDF.S.K.LS..........PEALEAIGKSALEY....D.QR....ENA....TVD.........DIANAASLIERNLRNIALGVDIRHK.VL.D.K..VNLSIDQMA.................................................
A0A858MSI7_9CAUD/1864-2019 ..............VKGVPSMVIGTGDGMIMQHMFA-..KGKPFNS.LPVFDGINFSGK.D.MDAGSRKANEGVYEAMLA.NPMRAIADAFNTFLAN-DP.V.S.MLlegdnidevrQFIVDEVSKTVAGK....R.TL....KGEd.ilTAE.........QIRNELISIADTLNELAMETDARNI.VL.R.E..MSLSVDQMA.................................................
A0A1L2C924_9CAUD/2013-2125 ..............VGGIPRFVISRGDGATIVEFFNRalEQGVTTP.LAIFDGINLGVN.E.FETGSKLANESVLHSIMQ.NPVQGLSNQIE--------.-.-.--..........--------------....-.--....---....---.........-------------------------.--.-.-..---------kgmypmleelgfeigpdssvsvqngeeikalvdtlteri..........
A0A2P1JUW9_9CAUD/1879-2023 ..............VAGAAFMTIGSGDGRMMQYLANA..K--LKGT.LKVFDGMNIALDnR.LMDYSRRANEAVYQSWQG.NPLAAVNDSWVKFSKNVSF.D.D.VS..........QEMLVELYRALGIR....L.ER....NEV...hTVS.........AVQAAMEELGLNLKWSAESAADRIT.AR.Q.A..VANSVDQMA.................................................
A0A5B8R7F2_9CAUD/2026-2163 ...........eaa----------------MQAIAR-..DINPNNA.LNVFDGYINAVE.H.LESGSQAINQGVFQSWNEfDLLQDFTNRFEQAMEGVDV.D.AeLDv.......vaANSLQQSFDSIAED....-.--....---....---.........-------------------------.--.-.-..---------lglepgiypispeilndflkelkkeaatqtaikqgllggeaitsinqmt
M4PMR4_9CAUD/1833-1968 ..............VKSVAYTIQGSGDAMMMNLIFGA..DNYPQDA.INIWDGFDIPVS.K.IEEYSSLANERVLQSWDR.DVVGMFAHNYEQFAKNAD-.-.-.--..........ADLLAQAFSEATEN....A.KK....PHL....NFK.........TPAALKENIDKRYAEN----KARKA.AL.K.D..SPLSVDQMA.................................................
A0A2Z4QHU9_9CAUD/2040-2178 ..............VKSIPFTVIGTGDAMMMNLIFGN..ENAPNDV.LGIFDGLDIPLE.K.IQEYAPFVNEQVAKSWDR.DVLSMAIANFDGFLSHPD-.-.-.LD..........QTVLAETLDGLMQE....N.KK....ESL...nGMD.........SPEKIQKSLQERLREN----QARKA.VF.K.Q..LAISVDQMG.................................................
A0A097PAM3_9CAUD/1844-1989 ..............VAGIPFMTIGSGDGMLMQDLSTM..PGAPGDN.LKIFDGVNFRLD.H.LMDNSRMANQAVYASWQR.NPLAAVQKSFAVTLEKLDL.V.S.MR..........PEGLKKLAEAVLGK....K.QA....EAG...fTVD.........QLEEEIRLLGDGLSAVADSAEARHR.VL.S.R..VAMSVDQMA.................................................
S4TNI5_9CAUD/1995-2132 ...........eaa----------------MQAIAR-..DINPNNA.LNVFDGYINAVS.H.LDTGSQAINQGVLQSWNEfDLLQDFTNRFEQAMDGVNL.AeE.LGp.......eaDARLEQSFRGIMEM....I.GA....DET....NAP.........TSPEVVEAFTTLLKREAATQTAIKQgLLgG.E..AVTSINQM-t................................................
A0A514CUJ9_9CAUD/1879-2024 ..............VAGIPFMTIGTGDGMMMQGLSNM..KGAPTGT.LKIFDGINLPLD.Q.IESGSEMANRAVYESWMG.NPLQAVSDSYQKFLKNADF.K.N.MN..........EELTNSLKRSLLEP....KlWK....EKV....APE.........YLEGAARALGEKLKFSAMSAEARHR.AM.D.R..VNLSVDQMA.................................................
A0A1L2C9F7_9CAUD/2046-2158 ..............VGGIPRFVISRGDGATIVEFFNRalEQGVTTP.LAIFDGINLGVN.E.FETGSKLANESVLHSIMQ.NPVQGLSNQIE--------.-.-.--..........--------------....-.--....---....---.........-------------------------.--.-.-..---------kgmypmleelgfeigpdssvsvqngeeikalvdtlteri..........
A0A7S5UU06_9CAUD/1803-1934 ..............VGGIPYTVIGTGDGQMVQNIFAN..T-NIDNV.LAVFDGIELPAS.K.IKEYSELINKSVYEAWQA.NPVADIANAFRAFVRRNPF.AlK.LS..........-------------D....E.TK....AKL....DRA.........LEGVDIADLAQALQNDADSIAERKA.AL.N.Q..VTLSVDHMA.................................................
W6ASR7_9CAUD/1938-2085 ..............VSGIPFINIGMGDGQMVQNTATS..PKAPKNN.LYVFDGMNMALD.R.LSQDSTTVNQGVFDSWMN.NPIRVVKDSFDQMMKHVA-.D.N.MP..........EASRVAFVRSISPEfiseE.DA....ASI....SNA.........GIMNMLQELQATLDYSADIIDARHS.VL.D.N..HNISVDQMA.................................................
J9SSZ3_9CAUD/2001-2145 ..............VAGIPFMTIGTGDGMMMQTLSTM..KGAPKNT.LKIFDGMNIGIN.D.ITDASRKANEAVYTSWQG.NPIKNVYDSYAKFMKNVDF.S.K.LS..........DKTKQAIAKSALEY....D.QR....EGA....TDD.........LLRVGAEQIERNLRNIALGVDIRHK.VM.N.Q..VQVTVDQMA.................................................
A0A067Y1K7_9CAUD/2002-2146 ..............VAGIPFMTIGTGDGMMMQTLSTM..KGAPKNT.LKIFDGMNIGIN.D.ITDASRKANEAVYTSWQG.NPIKNVYDSYAKFMKNVDF.S.K.LS..........DETKQAIAKSALEY....D.QR....EGA....TDD.........LLRVGAEQIERNLRNIALGVDIRHK.VM.N.Q..VQTTVDQMA.................................................
A0A0L0CE10_LUCCU/2018-2134 ...........egy----------------MQAYNTL..NNKEAPT.QDVFDGLESTLA.R.LASSSQNINTGFINAMRF.DLMKDFNERFNKFVENVGA.E.N.IA..........D-ILNRMASEGTKD....N.IR....---....EIG.........MLKNSLGNITKSLD-----------.--.-.-..---------nmhetpvgayhie....................................
A0A5C2H3R5_9CAUD/1859-2003 ..............VAGVPYMVIGTGDGQMVQNIITG..SNAPEGA.LYVFDGVEMKAS.T.IDEDSRKINEAVFDGWMG.NPVQSVSESFSAFLNTDIF.D.Q.LD..........DAGKQEIMEALYGK....S.DA....AGT....AWE.........DALNDISDLNAGMVSDAQSIEARHR.AM.E.R..VELSVDHMA.................................................
A0A0K2FIP3_9CAUD/1840-1985 ..............VAGIPVMTIGTGDGQMMQTLATM..KGKPTGT.LKIFDGMNMKLS.S.IEADAQKANQAVYESWMG.NPLQAVSDSYQKFLKAADF.S.N.MN..........DDLTTGLKRSLLEP....KqWK....EDV....KPE.........VLEAAAIALGERLKQSAMEAEARHR.AL.D.R..VNLSIDQMA.................................................
A0A7S5RMZ0_9CAUD/1798-1929 ..............VGGVPYMVIGTGDGQMVQNIFAN..T-NIDNV.LAVFDGIELPAS.K.IKEYSEQINKAVYDAWQA.NPVADIASAFRAFVRRNP-.-.-.LS..........LDLSDE--------....-.TK....AKL....DRT.........LEGLSIEDLAQVLQQDAESIAARKA.AL.N.Q..VPLSVDHMA.................................................
V9VG30_9CAUD/1833-1978 ..............VSGIPVMTIGTGDGQMMQTIATM..KGKPTGT.LKIFDGMNLPLN.Q.IENGAEKANQAVYESWMG.NPLQAVSDSYQAFMKNADF.T.N.MS..........EDLVNSLKRSLLEP....KqWR....DDV....KPE.........VLKAAAEALGSRLAQSALEAEARHR.AL.D.R..VNLSIDQMA.................................................
C4NTE0_9CAUD/2297-2434 ..............VRALPFAVIGTGDAMMMNLIFGA..DNAPNDV.LPVFDGIDVPVS.K.IKQYAPQINEAVLKSWDR.DVLGMAVQNFEGFMSN---.-.N.LE..........ADILNDVWAELMTD....N.KK....ESL...qFFQ.........GPEDLQAEMTKRLKEN----RARKK.VF.R.Q..MAVSVDQMG.................................................
A0A0A7XDM1_9CAUD/2001-2145 ..............VAGIPFMTIGTGDGMMMQTLSTM..KGAPKNT.LKIFDGMNIGIN.D.ITDASRKANEAVYTSWQG.NPIKNVYDSFAKFMKNVDF.S.K.LS..........DETKQAIAKSALEY....D.QR....EGA....TDD.........LLRVGAEQIERNLRNIALGVDIRHK.VM.D.Q..VQVTVDQMA.................................................
A0A514CTB6_9CAUD/1840-1985 ..............VAGIPVMTIGTGDGQMMQTLATM..KGKPTGT.LKIFDGMNMKLS.S.IEADAQKANQAVYESWMG.NPLQAVSDSYQKFLKAADF.S.N.MN..........DDLTTGLKRSLLEP....KqWK....EDV....KPE.........ILEAAAVALGERLKQSAMEAEARHR.AL.D.R..VNLSIDQMA.................................................
A0A7S5R3R1_9CAUD/1797-1928 ..............VGGVPYVVIGTGDGQMVQNIFAN..T-NIDNV.LAVFDGIELPAS.K.IKEYSEQINKAVYDAWQA.NPVADIAAAFRAFVRR-DP.F.S.LD..........L--S---------E....D.TD....AKL....GKV.........LEGLPIEDLAQALQKDAESIAARKA.AL.N.Q..VPLSVDHMA.................................................
A0A514CVV1_9CAUD/1853-1998 ..............VAGIPFLTIGMGDGMMMQELAAM..KNGPTGT.LKIFDGMNMKLS.T.ITEDSVKANEAVYKSWQG.NPAQAVSDSFQKFMKNADF.S.N.MS..........DDLQAALRRSLLEP....KyWN....EKV....KPE.........VLEAAALALGNRLANTALEVKARHN.VM.N.R..VQVTVDQMG.................................................
A0A898KBE2_9CAUD/1984-2121 ...........eaa----------------MQAIAR-..DINPNNA.LNVFDGYINAVE.H.LESGSQAINQGVLQSWNEfNLLQDFTNRFEQGMENVDIaS.E.LD..........ADVATRLQQSFDSI....A.EE....LGFe.pgLNP.........VSPEVVEAFTTQLKKEAALQTAIKE.ALfNgE..AVTSVNQM-t................................................
G0YQH1_9CAUD/1989-2142 ..............VRTVALATISGGDATMMTRFFNM..IKKLGLVaQNVYDGLDTRVG.D.MEAASDAINQSVAEGWGT.NLYANIIAGTSKALENLDL.A.A.MS..........DADFAQVVRSVTNKf..vS.-A....DKVkamrNAK.........TYAALTGEIQSMLQSH-KQMSARNA.AV.R.Q..A--------lletkstishmg.....................................
#=GC seq_cons ..............VuGIPaMsIGTGDGhMMQslush..csuPpss.LplFDGhNlsls.c.IpssScpANcAVYpSWpu.NPlpslh-uFppFhcNsDh.s.p.ls..........sphhptlt+uhhc.....p.pc....cph....ssc.........hhpsshptltppLpptA.thcsR+p.sh.s.p..VplSVDQMA.................................................
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