KEGG   Pyrococcus horikoshii: PH1478
Entry
PH1478            CDS       T00014                                 
Symbol
PH1478
Name
(GenBank) 629aa long hypothetical arginyl-tRNA synthetase
  KO
K01887  arginyl-tRNA synthetase [EC:6.1.1.19]
Organism
pho  Pyrococcus horikoshii
Pathway
pho00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:pho00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    PH1478 (PH1478)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:pho01007]
    PH1478 (PH1478)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pho03016]
    PH1478 (PH1478)
   03029 Mitochondrial biogenesis [BR:pho03029]
    PH1478 (PH1478)
Enzymes [BR:pho01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.19  arginine---tRNA ligase
     PH1478 (PH1478)
Amino acid related enzymes [BR:pho01007]
 Aminoacyl-tRNA synthetase
  Class I (G)
   PH1478 (PH1478)
Transfer RNA biogenesis [BR:pho03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    PH1478 (PH1478)
 Prokaryotic type
   Other AARSs
    PH1478 (PH1478)
Mitochondrial biogenesis [BR:pho03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    PH1478 (PH1478)
SSDB
Motif
Pfam: tRNA-synt_1d DALR_1 Arg_tRNA_synt_N tRNA-synt_1e tRNA-synt_1 tRNA-synt_1g AAR2_1st
Other DBs
NCBI-ProteinID: BAA30585
UniProt: O59147
Structure
Position
complement(1321573..1323462)
AA seq 629 aa
MLMEIRESVKERIEEIIKEIAPQWEGEIELKETPDPKLGDFGTPIAFKLAKLLKRPPIEI
AEKIVEKLKLNLPEGIKDVKAVNGYINVFIDYPHFARILINDILAKGDRFGSSEIGKGKK
VIVEHTSVNPTKPLHMGHARNAILGDVMARILRFLGYEVEVQNYIDDLGIQFAQVYWGYL
RLKEEFERIMNELRERGLKDNPIDHALGLLYVEVNRRLEDNPELENEIRDIMKKLESGEL
YGRKLAEEVVRAQMVTTYKLGVKYDLLVWESDIVRRKLFEIALELLSKNENFYIPSDGKY
RGAFVMDLRKLFPDMKNPILVLRRSDGTATYTGKDIAYHLWKFGKIDVDLLYKEWDSTTW
TTAPDGKSMPNKFGNANIVINVIGAEQKHPQLAIKYALQLLGFEDAAANLYHLAYEHVER
PEGKFSGRKGTWVGFTVDEVIQEAVKRARELIEEKNPALSDEEKAEVAEKVGIGAIRYNL
IKYSPDKKIIFRWEDVLNFEGESAPYIQYAHARCSSILRKAEEEGIKVDPETLFKNADFT
KLSERERELVIMLSKFPRIVEQAGKDVKPHLIAWFANELASLFNKFYMDHPVLKAEEGVR
EARLLLVMAVEQVLKNALYLMGIEAPERM
NT seq 1890 nt   +upstreamnt  +downstreamnt
atgcttatggagataagggagagcgttaaggagaggatcgaggagataattaaagaaatt
gcccctcaatgggagggggaaattgaacttaaagaaaccccagacccaaagcttggtgat
tttggcaccccaattgcctttaagctcgctaaattactaaaaagacctccaattgagatt
gcggagaaaatagttgaaaagctaaaactcaaccttccagaaggaataaaggatgttaag
gccgtgaatgggtatataaacgtatttattgattacccccacttcgcaaggatcctaatt
aacgatatcttagcaaagggggataggtttgggagtagtgaaattggcaagggaaaaaag
gtgatagttgagcatacctcagtaaatcccactaagccccttcacatggggcatgcaagg
aatgcaatcttaggagatgtaatggctagaattctaaggttccttggatacgaggtggaa
gtccaaaattatatagacgacctagggattcaatttgcccaggtatattggggatacttg
aggctgaaggaagagtttgagaggataatgaatgaactcagagaaagaggacttaaggat
aatccgattgatcatgcccttggactgctgtacgtggaggttaaccgtagattagaggat
aatccagagcttgaaaacgagataagggatattatgaaaaaactagaaagtggagaatta
tatggaaggaagctagctgaagaggtcgttagagctcagatggttaccacgtataagctg
ggagtcaaatatgatctcctagtgtgggagagtgatatagttagaaggaagctatttgag
atagcacttgaactactaagcaaaaacgagaacttctatatcccatcagatggcaaatat
cggggagcttttgtcatggatttaaggaagctctttccagatatgaagaatcctattctt
gtattgaggagaagcgatggtaccgctacgtatactgggaaagatattgcataccatcta
tggaagtttggaaaaatagatgtcgatttactttacaaggaatgggattcgactacctgg
acaacggccccggatggtaaaagcatgccaaacaaatttggaaacgcaaatatcgttata
aacgttataggggctgagcaaaagcatccacagcttgcaattaaatatgctctccagttg
ctgggctttgaagatgcggctgctaatctatatcacttagcttatgagcacgttgagagg
cctgaagggaaattctccggaaggaaggggacttgggttggattcaccgtcgatgaagtt
attcaagaagccgtaaaaagggcgagggaattaattgaagaaaagaacccagccctatct
gatgaggaaaaagcggaagtagcggaaaaggttggcattggtgctataaggtacaattta
ataaaatacagtccggataagaagatcatatttaggtgggaggatgttctcaactttgaa
ggggaaagcgctccttacatccagtatgcccatgccagatgctcttcaattttgaggaag
gccgaggaagagggtataaaagttgacccagaaactttgtttaagaatgctgactttaca
aagttaagtgagagggagagggaattggtaataatgctctcaaagtttccaagaatcgtt
gagcaggctggtaaggatgttaaaccccacttaattgcatggtttgctaatgaattggca
tccctattcaataagttctacatggatcatcccgtattgaaggccgaagaaggggtaagg
gaggcgaggcttctattggtaatggccgtagagcaggttctaaagaatgctctgtacctc
atgggaattgaggctcctgaaaggatgtag

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
3D Structure (2)   
   PDB (2)   
Protein domain (7)   
   Pfam (7)   
All databases (40)   

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