KEGG   Pyrococcus horikoshii: PH1637
Entry
PH1637            CDS       T00014                                 
Symbol
PH1637
Name
(GenBank) 261aa long hypothetical DNA-directed RNA polymerase subunit D
  KO
K03047  DNA-directed RNA polymerase subunit D [EC:2.7.7.6]
Organism
pho  Pyrococcus horikoshii
Pathway
pho03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pho00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PH1637 (PH1637)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pho03021]
    PH1637 (PH1637)
Enzymes [BR:pho01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     PH1637 (PH1637)
Transcription machinery [BR:pho03021]
 Prokaryotic type
  Archaeal type
   RNA polymerase
    Core subunits
     PH1637 (PH1637)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L
Other DBs
NCBI-ProteinID: BAA30749
UniProt: O59303
Position
complement(1448174..1448959)
AA seq 261 aa
MEMVKIKILKKTEDSITFILEGVSVAFANALRRTILGEVPTFAVDEVEFYENDSALFDEI
IAHRLAMIPLKTPTDRFELDALELDDYTVTLSLEAEGPGIVYSGDLKSDDPDVKPVTPDI
PIVKLAKGQRLVFNAYAKLGRGKDHAKWQPGFTYYKYFTRVHISKKINGWEKLAKLAKKR
GLPTKENEEEVIVETIKPFYIPKEFEEYEGKEIWEEIVPDTYVFVVETNGELPVEEIVKI
ALRILMRKADRFINELQRLAG
NT seq 786 nt   +upstreamnt  +downstreamnt
atggaaatggttaagattaaaattctaaaaaagactgaggattcaataacctttatcctg
gaaggtgttagtgtcgcttttgcaaatgctctcaggagaacgatattgggtgaagttccg
acgtttgccgttgatgaagtcgaattctatgaaaatgactccgcattgtttgatgaaata
attgcgcacaggcttgcaatgatcccattaaagacacctacagataggtttgagttagat
gcattggagcttgatgattacactgtgacactttcactggaggctgaaggccctgggatt
gtgtattcaggagatctaaaaagtgatgaccccgatgtgaagccagtcactcctgatatt
ccaatcgtaaaattagccaagggtcaaaggctggtttttaatgcatatgcaaaacttgga
aggggaaaggatcatgcaaaatggcagcctggcttcacatattataaatactttacgagg
gttcatataagcaaaaagattaatgggtgggaaaaattagcaaagctagctaaaaagagg
ggtctacctactaaggagaatgaagaggaggtaatagtcgaaactataaagccattttat
attcccaaggagtttgaggaatatgaagggaaggaaatttgggaagaaatagtgccagat
acttacgtatttgttgttgagactaatggagagttgcccgttgaggaaatagtcaagata
gcgcttagaatactaatgaggaaggccgatagatttataaatgagcttcaaagattagct
ggttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

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