KEGG   Pseudomonas mendocina ymp: Pmen_3978
Entry
Pmen_3978         CDS       T00510                                 
Name
(GenBank) virulence-associated E family protein
  KO
K06919  putative DNA primase/helicase
Organism
pmy  Pseudomonas mendocina ymp
Brite
KEGG Orthology (KO) [BR:pmy00001]
 09190 Not Included in Pathway or Brite
  09192 Unclassified: genetic information processing
   99976 Replication and repair
    Pmen_3978
SSDB
Motif
Pfam: VapE-like_dom Toprim_3 DUF5906 Toprim_4
Other DBs
NCBI-ProteinID: ABP86725
UniProt: A4XZF9
Position
complement(4357242..4359476)
AA seq 744 aa
MTDRHELLDDVLAQLQAADLRPKTPLVIGKRTRCEVEGDKAPEKTGWYVIYEHMGSKGET
FYCGSFGDWRSGEKGSWHKIKPKGGKISAEDRAVMRARAEEGQRRAAEAEQKKHRTAARR
AAGIWKYLEEKGHCAYLDAKRVGGFGLRYKRKSGTALVPMRSVKTWDIVGLQVLYPAVVP
KLGRNKTYWPYGLEKEGAVHLLGPEPEPGDTILVCEGYATGASLYMATSLTVAVCFDAGN
LLPVAQGLRVRYPGRPLVFCADDDWKTEIQGKPVNVGKIKAENAAHLVGGRVVLPVFDSE
REDRWTDFNDLHCAEGLEAVKRQVEAVVRPATDAPWREKLQYAEKGGMIAHPYNVALILG
NDDRWGKVIAFDSFSSKIRKLRTPPYGGSAGDWSDLDDIKVMNWLAETYGLRVKTAHVVE
AVNAVAHDNAFHPVREYLDGLTWDGTPRLETWLQRHLGVADSEYARKVSKRWPLSAVARV
FEPGCKADSVLILEGAQGAGKSTSMSILGGLWFMDTPFNLGDKDGYQAIRGKWIVELGEL
DAFNKAESTRAKQFFSASVDTYRESYGRRVLDVPRQCVFVGTTNQDEYLKDDTGNRRYWP
VMCTKVALDGLRAERDQLWAEAVACYRAGHPWWVDRDEAEIFAAEQDQRYQADMWEEPII
AYLSQPTAGESVTGAQILEKALNIDPSHWGKPEQMRVGKIMHRLKWPRRRQSKPDRPTGS
RGYVYVRPPEWKKGAKPEQREAAF
NT seq 2235 nt   +upstreamnt  +downstreamnt
atgactgaccgtcacgagttgctcgacgatgtgctggcccagctgcaggccgctgacctt
cgccctaaaactccgctggtgatcggcaagcgcacccgctgcgaggtggagggcgacaag
gcgccggagaagacgggctggtatgtgatctatgagcacatgggctcgaagggcgaaacc
ttctactgtggctcgttcggcgattggcgctcgggcgagaagggcagctggcacaagatc
aagccgaagggcgggaagatctcggccgaggatcgcgccgtgatgagggcgcgagccgag
gagggccagcgcagggcggccgaggccgagcagaagaagcaccgcaccgccgcgcggcgg
gccgctggcatctggaagtatctggaggaaaaggggcactgcgcctacctggatgccaag
cgcgtcggcggcttcgggctgcgttacaagcggaagtcgggcactgccctggtgccgatg
cgcagcgtgaagacgtgggacattgttggcctgcaggtgctgtacccggccgtagtgccg
aagctgggccggaacaagacctattggccctatggcctggagaaggagggcgcggtgcat
ctgctcggcccggagccagagccaggtgacaccattctggtgtgcgaggggtacgcgacg
ggcgcaagcctgtacatggcgacttcgctgacggtggcggtgtgcttcgacgcgggcaac
ctgttgccggtggcgcaggggttgcgggtgcgctatccgggtcggccgttggtgttctgt
gccgacgatgactggaagactgagattcagggcaagccggtgaacgtgggcaagatcaag
gccgagaacgcggcgcacctcgtcggcggccgcgttgtgttgccggtgttcgatagcgag
cgcgaggaccggtggacggacttcaacgacctgcactgcgccgaggggcttgaggcggtg
aagcgccaggtggaggcggttgtgcggcctgccactgacgcgccctggcgggagaagctg
cagtatgcggagaagggcgggatgatcgctcacccgtacaacgtggcgttgatcctgggc
aacgatgaccgctggggcaaggtgattgcgttcgattcgttcagctcgaagatccgcaag
ttgcgcacgccgccgtatgggggaagcgctggggattggagcgacctcgatgacatcaag
gtgatgaactggctggccgagacctacggcttgcgggtgaagactgcgcatgtggtggag
gcggtgaacgcggtggcgcatgacaatgcgtttcacccggtgcgcgagtatctggatggg
ttgacctgggatggcacgccgcgcctggagacgtggctgcagcggcacctcggcgtggcg
gatagcgagtacgcgcggaaggtgagcaagcgctggccgttgtctgcggtggctcgggtg
tttgagccgggctgcaaggcggactcggtgctgatcctcgaaggggcgcagggtgcgggt
aagtccacctcgatgtcgatcctgggcgggttgtggttcatggatacgccgttcaacctg
ggcgacaaggatggctatcaggcgatccggggtaagtggatcgtggagctgggcgagctg
gacgccttcaacaaggctgagtcgacgcgggccaagcagtttttctcggcctcggtggat
acgtaccgggagagctacgggcgcagggtgctggatgtgccgcgccagtgcgtattcgtg
ggtacgacgaaccaagacgagtacctgaaggacgacactgggaaccgccgttactggccg
gtgatgtgcacgaaggtggcactggacggcctgcgggccgagcgcgatcaactctgggcc
gaggcggtagcgtgttatcgcgctgggcatccttggtgggtggatcgggacgaggcggaa
atcttcgccgctgagcaggaccagcgctatcaggcggatatgtgggaggagcccatcatc
gcctatctgagccagccgactgccggcgagagcgtgacgggggcgcagatccttgagaag
gcgttgaacatcgacccgagccattggggaaagccggagcagatgcgggtgggcaagatc
atgcatcggctcaagtggccacggcggcggcagagcaagccggacaggccgacaggttcg
cgcgggtacgtgtacgtgcggccgcccgagtggaagaagggcgcgaagcccgagcagagg
gaggccgcattttga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (10)   

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