KEGG   Pan paniscus (bonobo): 100971286
Entry
100971286         CDS       T02283                                 
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
  KO
K10802  high mobility group protein B1
Organism
pps  Pan paniscus (bonobo)
Pathway
pps03410  Base excision repair
pps04140  Autophagy - animal
pps04217  Necroptosis
pps04613  Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:pps00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    100971286 (HMGB1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    100971286 (HMGB1)
  09143 Cell growth and death
   04217 Necroptosis
    100971286 (HMGB1)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    100971286 (HMGB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pps03036]
    100971286 (HMGB1)
   03400 DNA repair and recombination proteins [BR:pps03400]
    100971286 (HMGB1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pps04147]
    100971286 (HMGB1)
Chromosome and associated proteins [BR:pps03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    100971286 (HMGB1)
DNA repair and recombination proteins [BR:pps03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     100971286 (HMGB1)
   MMR (mismatch excision repair)
    Other MMR factors
     100971286 (HMGB1)
Exosome [BR:pps04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   100971286 (HMGB1)
SSDB
Motif
Pfam: HMG_box_2 HMG_box NOA36 HMG_box_5 Nop14
Other DBs
NCBI-GeneID: 100971286
NCBI-ProteinID: XP_003826902
Ensembl: ENSPPAG00000030148
UniProt: A0A2R9AAV8
Position
13:complement(11737942..11894923)
AA seq 215 aa
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEDDEEDEEDEEEEEDEEDEDEEEDDDDE
NT seq 648 nt   +upstreamnt  +downstreamnt
atgggcaaaggagatcctaagaagccgaggggcaaaatgtcatcatatgcattttttgtg
caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag
ttttctaagaagtgctcagagaggtggaagaccatgtctgctaaagagaaaggaaaattt
gaagatatggcaaaggcggacaaggcccgttatgaaagagaaatgaaaacctatatccct
cccaaaggggagacaaaaaagaagttcaaggatcccaatgcacccaagaggcctccttcg
gccttcttcctcttctgctctgagtatcgcccaaaaatcaaaggagaacatcctggcctg
tccattggtgatgttgcgaagaaactgggagagatgtggaataacactgctgcagatgac
aagcagccttatgaaaagaaggctgcgaagctgaaggaaaaatacgaaaaggatattgct
gcatatcgagctaaaggaaagcctgatgcagcaaaaaagggagttgtcaaggctgaaaaa
agcaagaaaaagaaggaagaggaggacgatgaggaagatgaagaggatgaggaggaggag
gaagatgaagaagatgaagatgaagaagaagatgatgatgatgaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (8)   
   UniProt (1)   
   RefSeq(pep) (7)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (5)   
   Pfam (5)   
All databases (34)   

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