KEGG   Pan paniscus (bonobo): 100971498
Entry
100971498         CDS       T02283                                 
Symbol
APOBEC3B
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3B
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
pps  Pan paniscus (bonobo)
Pathway
pps03250  Viral life cycle - HIV-1
pps05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:pps00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100971498 (APOBEC3B)
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    100971498 (APOBEC3B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pps03019]
    100971498 (APOBEC3B)
Messenger RNA biogenesis [BR:pps03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100971498 (APOBEC3B)
SSDB
Motif
Pfam: NAD2 APOBEC2 NAD1 APOBEC_N SNAD4 APOBEC3 APOBEC_C APOBEC4_like APOBEC4 APOBEC1 dCMP_cyt_deam_1 Viral_Rep Toxin-deaminase
Other DBs
NCBI-GeneID: 100971498
NCBI-ProteinID: NP_001288695
Ensembl: ENSPPAG00000009288
UniProt: W0HFS6
Position
22:19892548..19902455
AA seq 382 aa
MNPQIRNPMEWMYQRTFYYNFENEPILYGRSYTWLCYEVKIRRGHSNLLWDTGVFRGQMY
SQPEHHAEMYFLSWFCGNQLSAYKCFQITWFVSWTPCPDCVAKLAEFLAEHPNVTLTISA
ARLYYYWERDYRRALCRLSQAGARVKIMDYEEFAYCWENFVYNEGQPFMPWYKFDDNYAF
LHRTLKEIIRHLMDPDTFTFNFNNDPLVLRRHQTYLCYEVERLDNGTWVLMDQHMGFLCN
EAKNLLCGFYGRHAELRFLDLVPSLQLDPAQIYRVTWFISWSPCFSWGCAGQVRAFLQEN
THVRLRIFAARIYDYDPLYKEALQMLRDAGAQVSIMTYDEFEYCWDTFVYRQGCPFQPWD
GLEEHSQALSGRLRAILQNQGN
NT seq 1149 nt   +upstreamnt  +downstreamnt
atgaatccacagatcagaaatccgatggagtggatgtatcaacgcacattctactacaac
tttgaaaacgaacccatcctctatggtcggagctacacctggctgtgctatgaagtgaaa
ataaggaggggccactcaaatctcctttgggacacaggggtctttcgaggccagatgtat
tcccagcctgagcaccacgcagaaatgtacttcctctcttggttctgtggcaaccagctg
tctgcttacaagtgtttccagatcacctggtttgtatcctggaccccctgcccggactgt
gtggcgaagctggccgaattcctggctgagcaccccaatgtcaccctgaccatctccgcc
gcccgcctctactactactgggaaagagattaccgaagggcgctctgcaggctgagtcag
gcaggagcccgcgtgaagatcatggactatgaagaatttgcatactgctgggaaaacttt
gtgtacaatgaaggtcagccattcatgccttggtacaaattcgatgacaattatgcattc
ctgcaccgcacgctaaaggagattatcagacacctgatggatccagacacattcactttc
aactttaacaatgaccctttggtccttcgacggcaccagacctacttgtgctatgaggtg
gagcgcctggacaatggcacctgggtcctgatggaccagcacatgggctttctatgcaac
gaggctaagaatcttctctgtggcttttacggccgccatgcggagctgcgcttcttggac
ctggttccttctttgcagttggacccggcccagatctacagggtcacttggttcatctcc
tggagcccctgcttctcctggggctgtgccgggcaagtgcgtgcgttccttcaggagaac
acacacgtgagactgcgcatcttcgctgcccgcatctatgattacgaccccctatataag
gaggcgctgcaaatgctgcgggatgctggggcccaagtctccatcatgacctacgatgag
tttgagtactgctgggacacctttgtgtaccgccagggatgtcccttccagccctgggat
ggactagaggagcacagccaagccctgagtgggaggctgcgggccattctccagaatcag
ggaaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (13)   
   Pfam (13)   
All databases (30)   

Download RDF
DBGET integrated database retrieval system