KEGG   Pan paniscus (bonobo): 100972646
Entry
100972646         CDS       T02283                                 
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog isoform X1
  KO
K14792  rRNA biogenesis protein RRP5
Organism
pps  Pan paniscus (bonobo)
Brite
KEGG Orthology (KO) [BR:pps00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pps03009]
    100972646 (PDCD11)
Ribosome biogenesis [BR:pps03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    100972646 (PDCD11)
SSDB
Motif
Pfam: S1 Spt6_S1 Suf TPR_14 TPR_19 TPR_16 TPR_6 TPR_15 TPR_12 NRDE-2 PPR TPR_2
Other DBs
NCBI-GeneID: 100972646
NCBI-ProteinID: XP_034787308
Ensembl: ENSPPAG00000024593
Position
10:99994509..100043784
AA seq 1872 aa
MANLEESFPRGGTRKIHKPEKAFQQSVEQDNLFDISTEEGSTKRKKSQKGPAKTKKLKIE
KRESSKSAREKFEILSVESLCEGMRILGCVKEVNELELVISLPNGLQGFVQVTEICDAYT
KKLNEQVTQEQPLKDLLHLPELFSPGMLVRCVVSSLGITDRGKKSVKLSLNPKNVNRVLS
AEALKPGMLLTGTVSSLEDHGYLVDIGVDGTRAFLPLLKAQEYIRQKNKGAKLKVGQYLN
CIVEKVKGNGGVVSLSVGHSEVSTAIATEQQSWNLNNLLPGLVVKAQVQKVTPFGLTLNF
LTFFTGVVDFMHLDPKKAGTYFSNQAVRACILCVHPRTRVVRLSLRPIFLQPGRPLTRLS
CQNLGAVLDDVPVQGFFKKAGATFRLKDGVLAYARLSHLSDSKNVFNPEAFKPGNTHKCR
IIDYSQMDELALLSLRTSIIEAQYLRYHDIEPGAVVKGTVLTIKSYGMLVKVGEQMRGLV
PPMHLADILMKNPEKKYHIGDEVKCRVLLCDPEAKKLMMTLKKTLIESKLPVITCYADAK
PGLQTHGFIIRVKDYGCIVKFYNNVQGLVPKHELSTEYIPDPERVFYTGQVVKVVVLNCE
PSKERMLLSFKLSSDPEPKKEPAGHSQKKGKAINTGQLVDVKVLEKTKDGLEVAVLPHNI
RAFLPTSHLSDHVANGPLLHHWLQAGDILHRVLCLSQSEGRVLLCRKPALVSTVEGGQDP
KNFSEIHPGMLLIGFVKSIKDYGVFIQFPSGLSGLAPKAIMSDKFVTSTSDHFVEGQTVA
AKVTNVDEEKQRMLLSLRLSDCGLGDLAITSLLLLNQCLEELQGVRSLMSNRDSVLIQTL
AEMTPGMFLDLVVREVLEDGSVVFSGGPVPDLVLKASRYHRAGQEVESGQKKKVVILNVD
LLKLEVHVSLHQDLVNRKARKLRKGSEHQAVVQHLEKSFAIASLVETGHLAAFSLTSHLN
DTFRFDSEKLQVGQGVSLTLKTTEPGVTGLLLAVEGPAAKRTMRPTRKDSETVDEDEEVD
PALTVGTIKKHTLSIGDMVTGTVKSIKPTHVVVTLEDGIIGCIHASHILDDVPEGTSPTT
KLKVGKTVTARVIGGRDMKTFKYLPISHPRFVRTIPELSVRPSELEDGHTALNTHSVSPV
EKIKQYQAGQTVTCFLKKYNVVKKWLEVEIAPDIRGRIPLLLTSLSFKVLKHPDKKFRVG
QALRATVVGPDSSKTFLCLSLTGTHKLEEGEVAMGRVVKVTPNEGLTVSFPFGKIGTVSI
FHMSDSYSETPLEDFVPQKVVRCYILSTADNVLTLSLRSSRTNPETKSKVEDPEINSIQD
IKEGQLLRGYVGSIQPHGVFFRLGPSVVGLARYSHVSQHSPSKKTLYNKHLPEGKLLTAR
VLRLNHQKNLVELSFLPGDTGKPDVLSASLEGQLTKQEERKTEAEERDQKGEKKNQKRNE
KKNQKGQEEVEMPSKEEQQPQKPQAQKRGGQECRESGSEQERVSKKPKKAGLSEEDDSLV
DVYYREGKEEAEETNVLPKEKQTKPAEAPRLQLSSGFAWNVGLDSLTPALPPLAESSDSE
EDEKPHQATQIKKSKKERELEKQKAEKELSRIEEALMDPGRQPESADDFDRLVLSSPNSS
ILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESLTK
VFERAVQYNEPLKVFLHLADIYAKSEKFQEAGELYNRMLKRFRQEKAVWIKYGAFLLRRS
QAAASHRVLQRALECLPSKEHVDVIAKFAQLEFQLGDAERAKAIFENTLSTYPKRTDVWS
VYIDMTIKHGSQKDVRDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKDVQAVKAKAL
EYVEAKSSVLED
NT seq 5619 nt   +upstreamnt  +downstreamnt
atggcaaacctggaagaaagcttcccccgaggaggtacaagaaagatccacaaaccagag
aaagctttccagcagtcagttgaacaagacaacttatttgatatttctactgaagaggga
tccaccaaaagaaaaaagagccagaaggggccagcaaaaacaaaaaagttgaaaatcgaa
aagagagaaagcagcaagtccgcaagagagaagtttgaaatccttagtgttgagtccctg
tgtgagggaatgcggattttgggttgcgtgaaagaggtgaatgaactggaactggtgatt
agtctccccaatggcctccagggctttgtgcaagtcactgaaatctgtgatgcctacacc
aaaaagctgaatgagcaggtgacacaagaacaacctctgaaggacctacttcacttgcct
gaacttttctcacctggaatgctggtaagatgtgtggtgagcagtctgggcatcacagac
aggggcaagaagagtgtcaagctgtctctgaaccccaaaaatgtcaacagagtgctgagt
gctgaggccctgaagcctggcatgctacttacaggtaccgtatccagcctggaagaccat
ggctacctagtggacattggtgttgatgggaccagagcttttctgccactgctgaaagcc
caggagtacatcagacagaagaacaaaggtgctaaactaaaggtgggtcagtacctgaac
tgcattgttgaaaaggtgaaaggcaacggaggagttgttagtctgtctgttggtcactca
gaggtttctacggccattgctactgaacagcagagctggaaccttaataacttgctacca
ggactggtggtcaaagctcaggtacagaaggtgactccatttggccttacgctaaacttc
ctcacattcttcacgggcgtggttgactttatgcacctggatcccaagaaagctggaaca
tatttctcaaatcaggcggtgagggcctgcatcctttgcgtccatcctcgaaccagagtt
gtgcgcctgagcctgcgccccatcttcctacagcctggacgcccactcacccgactctct
tgccagaaccttggagcagtgctggatgatgttcctgtccagggttttttcaaaaaggct
ggggccacctttaggctgaaggatggggttctggcctatgcccggctcagccatctctct
gattctaagaacgtcttcaatcctgaggccttcaagccagggaacactcacaagtgtaga
attattgactacagccaaatggatgaactggccttgctctctctacgaacgtctattatt
gaagctcagtaccttagatatcatgacatcgaacctggggcagtggtaaagggcacagtg
ctaaccataaagtcatatgggatgctggtgaaggtgggcgagcagatgaggggcctggta
cctcccatgcacctggctgacatcctgatgaagaatccggagaagaagtaccacatcggg
gatgaggtcaagtgccgggttttgctttgtgaccctgaagccaagaagctgatgatgacc
ctgaaaaaaaccctgattgagtccaaactacctgtcattacctgctatgccgatgccaag
cctggtctgcagacacatggcttcatcatcagggtcaaggactatggctgcattgtgaag
ttctacaacaatgtgcagggactggtgcccaagcatgagctcagtactgagtatatccct
gacccggagagagttttttacactggccaggtggtgaaggttgtcgtattgaactgtgag
ccatccaaagagaggatgcttttatccttcaagctgtcgagtgacccagagccaaagaaa
gagcctgcaggacacagtcagaagaaaggaaaagccattaacactgggcagttggtagat
gtgaaggttttagagaagaccaaagatgggctggaggtggctgtcctgccccacaacatc
cgtgctttcctccccacatctcatctgtcggaccacgttgccaacggcccattgttacat
cattggctccaggcaggtgacatccttcaccgagtcctgtgtctgagccagagcgagggg
cgtgttcttctttgcaggaagccagccttggtctccacagtagaaggtggccaggatccc
aagaacttctcagaaatccatcctggaatgctgctcattggttttgtgaagagcatcaag
gactatggcgtgttcatccagttcccctcaggtcttagcggactggccccaaaagctatc
atgagtgacaaatttgtgacctccacaagtgaccactttgttgagggccagacagtagcg
gcaaaggtgaccaatgtggatgaggagaagcagcggatgctgctgtcactgcggctgtct
gactgtggtctgggggacttggccatcaccagcctcctcctcctgaatcagtgcctggag
gagctgcagggcgtgcgcagccttatgagcaaccgagactctgtgttgatccagacgctg
gccgagatgaccccaggaatgttccttgacctagtggtgcgggaggtgttggaagatggc
tctgtggtattcagtgggggtccagtgcccgacctggtcctgaaagccagcagataccat
cgcgcagggcaggaggtggaatctgggcagaaaaagaaggttgttatcttaaatgttgat
cttttgaagttggaagtgcacgtttcccttcaccaggacttggtgaatagaaaagctaga
aagctgaggaaaggcagcgaacaccaggcggttgtgcagcacttggagaagtcctttgcc
attgcctccttggtagagacgggccacctggcagctttctccctgacctctcacctcaac
gacaccttccgctttgactcagagaaattgcaggtgggacagggtgtctccctaaccctc
aagaccacagaaccaggagtgactggccttcttttggctgtggaggggccggctgccaag
aggaccatgaggccgacccggaaggactctgagacagttgatgaggatgaagaagtggat
ccagctctgactgtagggaccataaagaagcacaccctctccatcggggacatggtcaca
gggactgtcaagtccattaagcctacccatgtggttgtgactctggaagatggcattatt
ggctgtatccatgcctcccacattctagatgatgttccagagggcacctctcctactacc
aagctgaaggttgggaagacggtcactgcccgagtgattggcgggcgagacatgaagaca
ttcaagtatctcccaataagtcaccccagattcgttcgaaccatcccggagctgagtgtt
cggccaagtgagctggaggatggccacactgctcttaacactcactctgttagccccgtg
gagaagattaaacagtaccaggccggccagactgttacttgcttcttaaagaaatacaat
gtggtgaagaaatggcttgaggtggagattgccccagacatccgggggagaattccctta
ttgctcacttctctgagcttcaaggttctgaagcatccagataagaagttccgggttggc
caggccctgagggccactgttgttggcccagattcctccaagaccttcttatgtctgtcc
ctcacaggtactcacaagcttgaggaaggggaagtggccatgggccgagtggtgaaggtg
actcccaacgaggggctgaccgtctccttcccctttgggaagataggaacagtcagtata
tttcacatgagtgactcctactccgagacgcccctggaagacttcgtcccccagaaggtt
gtcagatgttacatcctgtccactgcagacaacgtattgactttgtcgctgcgatcatcc
agaacaaacccggagacgaaaagcaaagtagaagatccagagattaactccatccaggac
attaaggaagggcagcttctgaggggctatgtagggtccatccagccacacggtgtgttc
tttcgccttggcccctccgttgtgggtttggctcggtactcccatgtctcccagcacagc
ccgtccaagaaaaccctttataacaaacacctccctgaagggaagctgctcacagccagg
gtcctacgccttaaccaccagaagaacctggtagagctgtctttcctccccggagacact
gggaagccagacgtgctttctgcttccttggaagggcaacttacaaagcaagaggagagg
aaaacagaggctgaggagagagaccaaaaaggggaaaagaaaaatcagaaaaggaatgag
aagaagaaccagaaggggcaggaggaggtggagatgcccagcaaggaggagcaacagccc
cagaagccacaggcgcagaagcggggcgggcaggagtgccgggagtctgggagtgagcag
gaaagagtgagcaagaagccaaagaaagccggcctgtcagaggaggacgacagccttgtg
gacgtgtactatcgggagggaaaagaggaggcagaagagacgaatgtgctgcccaaggag
aagcaaaccaagccagcagaagcgccccggctgcagctatcttcaggcttcgcttggaat
gtgggactagactctctgaccccggccttgccacctctagcagagagctcagacagcgag
gaggatgagaagccacaccaagccacgcagataaagaaaagcaagaaagaaagggagttg
gagaagcagaaggcagagaaggaactgtcccgcattgaggaggcgctgatggatcctggg
cggcagccagagtccgcggatgattttgaccgactggtgctgagctcccccaatagctct
attctgtggctgcagtacatggctttccacctgcaggccacggagatcgagaaggcccgt
gccgtggctgagagggcccttaagaccatctccttcagagaggagcaggagaagctgaac
gtgtgggtggctctgctgaacctggagaacatgtacggctctcaggagtccctgaccaag
gtctttgagcgagccgtgcagtacaacgagcctctcaaagtctttctccacctggctgac
atctacgccaagtcagagaaattccaggaagctggtgaactctacaaccggatgctgaag
cgtttccggcaggagaaagctgtgtggatcaaatacggcgccttccttctgcggaggagc
caggctgcagccagtcaccgcgtgctgcagcgagccctggagtgcctgcctagcaaggag
catgtggatgtcattgccaagtttgcccagcttgagtttcagctgggggatgcagagcgg
gccaaagccatttttgagaacacgctgagcacctacccaaagcgcacagatgtctggtcg
gtctatatcgatatgaccatcaagcacggcagccagaaggacgtccgggacatctttgag
cgggtcattcatctgagcttggcccccaagagaatgaagttcttcttcaagcgctacctg
gactacgagaagcagcatggcactgagaaggatgtgcaggcagtcaaggccaaggccctg
gagtatgtggaggccaagagctcagtgctagaggactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (12)   
   Pfam (12)   
All databases (24)   

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