KEGG   Pan paniscus (bonobo): 100975218
Entry
100975218         CDS       T02283                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
pps  Pan paniscus (bonobo)
Brite
KEGG Orthology (KO) [BR:pps00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pps03036]
    100975218 (KDM4B)
Enzymes [BR:pps01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     100975218 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     100975218 (KDM4B)
Chromosome and associated proteins [BR:pps03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    100975218 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD LBR_tudor DUF4537 SLX1_C
Other DBs
NCBI-GeneID: 100975218
NCBI-ProteinID: XP_034801555
Ensembl: ENSPPAG00000036177
Position
19:3986296..4172359
AA seq 1130 aa
MGSEDHGAQNPSCKIMTFRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKPRQTY
DDIDDVVIPAPIQQVVTGQSGLFTQYNIQKKAMTVGEYRRLANSEKYCTPRHQDFDDLER
KYWKNLTFVSPIYGADISGSLYDDDVAQWNIGSLRTILDMVERECGTIIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLR
HKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKVATQCTCRKDMVKISMDVFVRILQPERYELWKQGKDLTVLDHTRPTALTSPELSSWSA
SRASLKAKLLRRQISLKENRHWRKTEEERKPSLERKKEQTKRPGLSSHRKRSQPKKPKPE
DPKFPGEGTAGAALLEEAGGSVKEEAGPEVDPEEEEEEPQPLPHGREAEGAEEDGRGKLR
PTKAKSERKKKSFGLLPPQLPPPPAHFPSEEALWLPSPLEPPVLGPGPAATEESLLPAPL
NVVPPEVPSEELEAKPRPIIPMLYVVPRPGKAAFNQEHVSCQQAFEHFAQKGPTWKEPVS
PMELTGPEDGAASSGAGRMETKARAGEGQAPSTFSKLKMEIKKSRRHPLGRPPTRSPLSV
VKQEASSDEEASPFSGEEDVSDPDALRPLLSLQWKNRAASFQAERKFNAAAARTEPYCAI
CTLFYPYCQALQTEKEAPTASLGEGCSATLPSKSRQKTRPLIPEMCFTSGGENTEPLPAN
SYIGDDGTSPLIACGKCCLQVHASCYGIRPELVNEGWTCSRCTAHAWTAECCLCNLRGGA
LQMTTDRRWIHVICAIAVPEARFLNVIERHPVDISAIPEQRWKLKCVYCRKRMKKVSGAC
IQCSYEHCSTSFHVTCAHAAGVLMEPDDWPYVVSITCLKHKSGGHAVQLLRAVSLGQVVI
TKNRNGLYYRCRVIGAASQTCYEVNFDDGSYSDNLYPESITSRDCVRLGPPSEGELVELR
WTDGNLYKAKFISSVTSHIYQVEFEDGSQLTVKRGDIFTLEEELPKRVRSRLSLSTGAPQ
EPAFSGEEAKAAKRPRVGTPLATEDSGRSQDYVAFVESLLQAQGRPGAPF
NT seq 3393 nt   +upstreamnt  +downstreamnt
atggggtctgaggaccacggcgcccagaaccccagctgtaaaatcatgacgtttcgccca
accatggaagaatttaaagacttcaacaaatacgtggcctacatagagtcgcagggagcc
caccgggcgggcctggccaagatcatccccccgaaggagtggaagccgcggcagacgtat
gatgacatcgacgacgtggtgatcccggcacccatccagcaggtggtgacgggccagtcg
ggcctcttcacgcagtacaatatccagaagaaggccatgacagtgggcgagtaccgccgc
ctggccaacagcgagaagtactgtaccccgcggcaccaggactttgacgaccttgaacgc
aaatactggaagaacctcacctttgtctccccgatctacggggctgacatcagcggctct
ttgtatgatgacgacgtggcccagtggaacatcgggagcctccggaccatcctggacatg
gtggagcgcgagtgcggcaccatcatcgagggcgtgaacacgccctacctgtacttcggc
atgtggaagaccaccttcgcctggcacaccgaggacatggacctgtacagcatcaactac
ctgcactttggggagcctaagtcctggtacgccatcccaccagagcacggcaagcgcctg
gagcggctggccatcggcttcttccccgggagctcgcagggctgcgacgccttcctgcgg
cataagatgaccctcatctcgcccatcatcctgaagaagtacgggatccccttcagccgg
atcacgcaggaggccggggaattcatgatcacatttccctacggctaccacgccggcttc
aatcacgggttcaactgcgcagaatctaccaacttcgccaccctgcgatggattgactac
ggcaaagtggccactcagtgcacgtgccggaaggacatggtcaagatctccatggacgtg
ttcgtgcgcatcctgcagcccgagcgctacgagctgtggaagcagggcaaggacctcacg
gtgctggaccacacgcggcccacggcgctcaccagccccgagctgagctcctggagtgcg
tcccgggcctcgctgaaggccaagctcctccgcagacaaattagtctgaaagaaaacaga
cactggagaaagactgaggaggagaggaaaccaagtctagaaaggaagaaagagcagacc
aaaaggccggggctgtcgtctcaccggaaacggagccagcccaagaagccgaagcccgaa
gaccccaagttccctggggagggtacggctggggcagcgctcctagaggaggctgggggc
agcgtgaaggaggaggctgggccggaggttgaccccgaggaggaggaggaggagccgcag
ccactgccacacggccgggaggccgagggcgcagaagaggacgggaggggcaagctgcgg
ccaaccaaggccaagagcgagcggaagaagaagagcttcggcctgctgcccccacagctg
ccgcccccgcctgctcacttcccctcagaggaggcgctgtggctgccatccccactggag
cccccggtgctgggcccgggccctgcggccacggaggagagcctcctgccggcgcccctt
aatgtcgtgccccctgaggtgcccagtgaggagctagaggccaagcctcggcccatcatc
cccatgctgtacgtggtgccgcggccgggcaaggcagccttcaaccaggagcacgtgtcc
tgccagcaggcctttgagcactttgcccagaagggtccgacctggaaggaaccagtttcc
cccatggagctgacggggccagaggacggtgcagccagcagtggagcgggtcgcatggag
accaaagcccgggccggagaggggcaggcaccgtccacattttccaaattgaagatggag
atcaagaagagccggcgccatcccctgggccggccgcccacccggtccccactgtcggtg
gtgaagcaggaggcctcaagtgacgaggaggcatcccctttctccggggaggaagatgtg
agtgacccggacgccttgaggccgctgctgtctctgcagtggaagaacagggcggccagc
ttccaggccgagaggaagttcaacgcagcggctgcgcgcacggagccctactgcgccatc
tgcacgctcttctacccctactgccaggccctacagactgagaaggaggcacccacagcc
tccctcggagagggctgctcggccacattaccctccaaaagccgtcagaagacccgaccg
ctcatccctgagatgtgcttcacctctggcggtgagaacacggagccgctgcctgccaac
tcctacatcggcgacgacgggaccagccccctgatcgcctgcggcaagtgctgcctgcag
gtccatgccagttgctatggcatccgtcccgagctggtcaatgaaggctggacgtgttcc
cggtgcacggcccacgcctggactgcggagtgctgcctgtgcaacctgcgaggaggtgcg
ctgcagatgaccaccgataggaggtggatccacgtgatctgtgccatcgcagtccccgag
gcgcgcttcctgaacgtgattgagcgccaccctgtggacatcagcgccatccccgagcag
cggtggaagctgaaatgcgtgtactgccggaagcggatgaagaaggtgtcaggtgcctgt
atccagtgctcctacgagcactgctccacgtccttccacgtgacctgcgcccacgccgcc
ggcgtgctcatggagccggacgactggccctacgtggtctccatcacctgcctcaagcac
aagtcggggggtcacgctgtccagctcctgagggccgtgtccctaggccaggtggtcatc
accaagaaccgcaacgggctgtactaccgctgtcgcgtcatcggtgccgcctcgcagacc
tgctatgaagtgaacttcgacgatggctcctacagtgacaacctgtaccccgagagcatc
acgagtagggactgtgtccgactgggacctccttccgagggggagctggtggagctccgg
tggactgatggcaacctctacaaggccaagttcatctcctccgtcaccagccacatctac
caggtggagtttgaggacgggtcccagctgacggtgaagcgtggggacatcttcaccctg
gaggaggagctgcccaagagggtccgctctcggctgtcactgagcacgggggcaccgcag
gagcccgccttctcgggggaggaggccaaggccgccaagcgcccgcgtgtgggcaccccg
cttgccacggaggactccgggcggagccaggactacgtggccttcgtggagagcctcctg
caggcgcagggccggcccggagcccccttctag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (10)   
   Pfam (10)   
All databases (33)   

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