KEGG   Pan paniscus (bonobo): 100978003
Entry
100978003         CDS       T02283                                 
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X2
  KO
K08331  autophagy-related protein 13
Organism
pps  Pan paniscus (bonobo)
Pathway
pps04136  Autophagy - other
pps04140  Autophagy - animal
pps04211  Longevity regulating pathway
pps05010  Alzheimer disease
pps05014  Amyotrophic lateral sclerosis
pps05016  Huntington disease
pps05017  Spinocerebellar ataxia
pps05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:pps00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    100978003 (ATG13)
   04136 Autophagy - other
    100978003 (ATG13)
 09150 Organismal Systems
  09149 Aging
   04211 Longevity regulating pathway
    100978003 (ATG13)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100978003 (ATG13)
   05014 Amyotrophic lateral sclerosis
    100978003 (ATG13)
   05016 Huntington disease
    100978003 (ATG13)
   05017 Spinocerebellar ataxia
    100978003 (ATG13)
   05022 Pathways of neurodegeneration - multiple diseases
    100978003 (ATG13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pps04131]
    100978003 (ATG13)
   03029 Mitochondrial biogenesis [BR:pps03029]
    100978003 (ATG13)
Membrane trafficking [BR:pps04131]
 Autophagy
  Autophagosome formation proteins
   ULK complex
    100978003 (ATG13)
   Atg1 complex
    100978003 (ATG13)
Mitochondrial biogenesis [BR:pps03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-independent mechanism factors
    100978003 (ATG13)
SSDB
Motif
Pfam: ATG13
Other DBs
NCBI-GeneID: 100978003
NCBI-ProteinID: XP_003815258
Ensembl: ENSPPAG00000042268
UniProt: A0A2R9CLU8
Position
11:46567728..46623609
AA seq 517 aa
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
IYPSVEDSQEVCTTSFSTSPPSQLSSSRLSYQPAALGVGSADLAYPVVFAAGLNATHPHQ
LMVPGKEGGVPLAPNQPVHGTQADQERLATCTPSDGTHCAATPSSSEDTETVSNSSEGRA
SPHDVLETIFVRKVGAFVNKPINQVTLTSLDIPFAMFAPKNLELEDTDPMVNPPDSPETE
SPLQGSLNSDGSSGGSSGNTHDDFVMIDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLS
IDIGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETLQ
NT seq 1554 nt   +upstreamnt  +downstreamnt
atggaaactgatctcaattcccaggacagaaaggacctggacaagtttattaaatttttt
gccctcaagactgtccaagtgattgtccaggctcgacttggtgaaaagatttgcactcgt
tcatcatcttctccaacgggttcagattggttcaacttagcaatcaaagacatcccagag
gttacacatgaagcaaagaaggcactggcagggcagctgcctgcggtcgggaggtccatg
tgtgtggagatttcacttaagacttctgagggagattccatggagctggaaatatggtgt
cttgaaatgaatgaaaagtgtgataaagaaatcaaagtttcctacacggtgtacaacaga
ctgtcattgctgctgaagtcccttcttgctataactagggtgacaccagcctataggctc
tccaggaaacaagggcatgaatatgtcatattatacaggatatattttggagaagttcag
ctgagtggcttaggagaaggcttccagacagttcgtgttgggacagtgggcacccctgtg
ggcaccatcactctttcttgtgcttacagaattaacttggcattcatgtctaccaggcaa
tttgagaggaccccacctatcatggggattattattgatcactttgtggaccgtccctat
cccagctcctctcccatgcacccctgcaattacagaactgctggtgaggacactggagta
atatacccatctgtagaagactctcaagaagtgtgtaccacctctttttccacctcccca
ccatcccagctctcaagctctcgcctttcctatcagcctgctgccctgggcgttggatca
gctgacctggcttatccagtagtgtttgctgctggcttaaatgctacacaccctcaccag
ctgatggttcctgggaaggaaggtggggtaccccttgctcccaaccagcctgtccatggt
acccaggctgaccaggagagactggcaacctgcaccccttctgacggaacccactgtgct
gccacaccctccagtagtgaggatactgaaaccgtatcaaacagcagcgagggacgggcc
tcccctcacgatgtcttggagaccatctttgtccgaaaagtgggggcttttgtcaacaaa
cccattaaccaggtgaccctgacgagtttggatataccctttgccatgtttgctcccaag
aatttggagctggaggataccgatccaatggtgaatcctccagattccccagagactgaa
tctcctctccagggcagcctgaactcagatggctccagcgggggcagcagtggcaatacc
catgatgactttgttatgatagactttaaaccagctttttctaaagatgacattcttccg
atggacctgggtaccttctatcgggagtttcagaacccacctcagctgagcagcctctcc
atagatattggagcacagtccatggctgaagacttggactcattaccagagaagctggct
gtgcatgagaagaatgtccgcgagtttgatgcctttgtggaaaccctgcagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (8)   
   KEGG PATHWAY (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (24)   
   UniProt (1)   
   RefSeq(pep) (23)   
DNA sequence (23)   
   RefSeq(nuc) (23)   
Protein domain (1)   
   Pfam (1)   
All databases (65)   

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